EWM26283.1, cds4389 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|585108284|gb|EWM26283.1| (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 536.569 bits (1381), Expect = 0.000e+0 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query: 1 MELSLQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
MELSLQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR
Sbjct: 1 MELSLQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|553190247|ref|XP_005855154.1| (3-oxoacyl-ACP reductase, partial [Nannochloropsis gaditana CCMP526] >gi|422293904|gb|EKU21204.1| 3-oxoacyl-ACP reductase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 536.569 bits (1381), Expect = 0.000e+0 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query: 1 MELSLQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
MELSLQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR
Sbjct: 14 MELSLQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 276
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|1086445990|emb|SDQ84623.1| (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. CF385]) HSP 1 Score: 346.665 bits (888), Expect = 7.545e-118 Identity = 168/259 (64.86%), Postives = 208/259 (80.31%), Query Frame = 0
Query: 5 LQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
+Q + ITGA SGIGAGIA+ LA E G VI +D+NL+AA+ AAQI+A G AEA AL+V I + + + R +DVL+NNAGLQHV+ LEDFP EKW F++QVML GVA LTRA+LP M E+GFGRIVNIGSIH+++ASP+KSAYVAAKHGL+GFSKV+ALET+D DITINT+CPSYVKTPLVD QIA+QA+T GISE +V++++ML+PMPK FI + EL G T FLTS AARN+TGQT+V+DGGWTV+
Sbjct: 1 MQNTHTLLITGAASGIGAGIAAQLA-EAGRHVIVSDLNLDAAEAVAAQIRAAGGSAEAVALDVTSQDSIDAALAAVSRP---IDVLVNNAGLQHVSPLEDFPIEKWDFLVQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVLALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISEADVVSQVMLKPMPKGVFIGLDELAGITAFLTSPAARNITGQTIVVDGGWTVQ 255
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|948223531|ref|WP_056881238.1| (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. Root630] >gi|945989440|gb|KRA42445.1| 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. Root630]) HSP 1 Score: 344.739 bits (883), Expect = 3.896e-117 Identity = 167/259 (64.48%), Postives = 207/259 (79.92%), Query Frame = 0
Query: 5 LQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
+Q + ITGA SGIGAGIA+ LA E G VI +D+NL+AA+ A QI+A G AEA AL+V I + + + R +DVL+NNAGLQHV+ LEDFP EKW F++QVML GVA LTRA+LP M E+GFGRIVNIGSIH+++ASP+KSAYVAAKHGL+GFSKV+ALET+D DITINT+CPSYVKTPLVD QIA+QA+T GISE +V++++ML+PMPK FI + EL G T FLTS AARN+TGQT+V+DGGWTV+
Sbjct: 1 MQPTHTLLITGAASGIGAGIAAQLA-EAGRHVIVSDLNLDAAEAVATQIRADGGSAEAVALDVTSQDSIDAALATISRP---IDVLVNNAGLQHVSPLEDFPIEKWDFLVQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVLALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISEADVVSQVMLKPMPKGVFIGLDELAGITAFLTSPAARNITGQTIVVDGGWTVQ 255
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|1011459821|ref|WP_062356574.1| (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas mexicana]) HSP 1 Score: 343.969 bits (881), Expect = 9.049e-117 Identity = 165/259 (63.71%), Postives = 207/259 (79.92%), Query Frame = 0
Query: 5 LQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
+Q + +TGA SGIGAGIA+ LA E G VI +D+NL+AA A QI+++ G AEA AL+V I + + + R +DVL+NNAGLQHV+ LEDFP EKW F++QVML GVA LTRA+LP M E+GFGRIVNIGSIH+++ASP+KSAYVAAKHGL+GFSKV+ALET+D DITINT+CPSYVKTPLVD QIA+QA+T GISE +V++++ML+PMPK FI + EL G T FLTS AARN+TGQT+V+DGGWTV+
Sbjct: 1 MQPTHTVLVTGAASGIGAGIAAQLA-EAGRHVIVSDLNLDAAAAVATQIRSEGGSAEAVALDVTSQASIDAALATISRP---IDVLVNNAGLQHVSPLEDFPIEKWDFLVQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVLALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISEADVVSQVMLKPMPKGVFIGLDELAGITAFLTSPAARNITGQTIVVDGGWTVQ 255
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|947172885|ref|WP_055943913.1| (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. Root65] >gi|945998055|gb|KRA51009.1| 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. Root65]) HSP 1 Score: 343.584 bits (880), Expect = 1.284e-116 Identity = 166/259 (64.09%), Postives = 206/259 (79.54%), Query Frame = 0
Query: 5 LQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
+Q + ITGA SGIGAGIA+ LA E G VI +D+N EAA+ A QI+ + G AEA AL+V I + + + R +DVL+NNAGLQHV+ LEDFP EKW F++QVML GVA LTRA+LP M E+GFGRIVNIGSIH+++ASP+KSAYVAAKHGL+GFSKV+ALET+D DITINT+CPSYVKTPLVD QIA+QA+T GISE +V++++ML+PMPK FI + EL G T FLTS AARN+TGQT+V+DGGWTV+
Sbjct: 1 MQPTHTLLITGAASGIGAGIAAQLA-EAGRHVIVSDLNFEAAEAVATQIRTEGGSAEAVALDVTSQDSIEAALATISRP---IDVLVNNAGLQHVSPLEDFPIEKWDFLVQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVLALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISEVDVVSQVMLKPMPKGVFIGLDELAGITAFLTSPAARNITGQTIVVDGGWTVQ 255
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|1160878441|ref|WP_079722750.1| (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas indica] >gi|1154430622|emb|SKC44149.1| 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas indica]) HSP 1 Score: 341.658 bits (875), Expect = 6.691e-116 Identity = 168/252 (66.67%), Postives = 203/252 (80.56%), Query Frame = 0
Query: 12 FITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
ITGA SGIGAG+AS LA E G VI +D+NL+AAQ AA+I A G AEA L+V+ I + + + R VDVL+NNAGLQHV+ LEDFP EKW F+IQVML GVA LTRA+LP M ++GFGRI+NIGSIH+++ASP+KSAYVAAKHGL+GFSKVIALET+D DITINTICPSYVKTPLVD QIA+QA+T GI E EV+++IML+PMPK FI + EL G T FL+S AARN+TGQT+V+DGGWTV+
Sbjct: 7 LITGAASGIGAGVASLLA-ESGRHVIISDLNLDAAQAVAAKIVADGGSAEAVQLDVSSEASITAALAAISRP---VDVLVNNAGLQHVSPLEDFPMEKWDFLIQVMLVGVARLTRALLPGMRQRGFGRIINIGSIHALVASPYKSAYVAAKHGLVGFSKVIALETADSDITINTICPSYVKTPLVDKQIADQARTRGIPEAEVVSQIMLKPMPKGVFIEMDELAGITAFLSSPAARNITGQTIVVDGGWTVQ 254
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|655563534|ref|WP_028917326.1| (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. J35]) HSP 1 Score: 340.502 bits (872), Expect = 1.482e-115 Identity = 165/255 (64.71%), Postives = 203/255 (79.61%), Query Frame = 0
Query: 9 RRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
R ITGA SGIGAGIA LA G VI +D++L+ A+ AA I+ K G AEA AL+V + + + + + R V+VL+NNAGLQHV+ LE+FP +W F++QVMLTGVA LTRA+LP M E+GFGRIVNIGSIH+++ASP+KSAYVAAKHGL+GFSKVIALET+D DITINT+CPSYVKTPLVD QIA+QA+T GISE +V++++ML+PMPK FI + EL GTT FL S AARNMTGQTLVLDGGWTV+
Sbjct: 2 RSILITGAASGIGAGIAHELAAA-GHHVIVSDLSLDGAEAVAADIRGKGGSAEAVALDVTSDESVAAALAAISRP---VEVLVNNAGLQHVSPLEEFPIARWDFLVQVMLTGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVIALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISESDVVSQVMLKPMPKGVFIEMDELAGTTTFLISHAARNMTGQTLVLDGGWTVQ 252
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|640340338|ref|WP_024869540.1| (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas suwonensis]) HSP 1 Score: 340.117 bits (871), Expect = 2.080e-115 Identity = 167/255 (65.49%), Postives = 202/255 (79.22%), Query Frame = 0
Query: 9 RRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
R ITGA SGIGAGIA LA G VI +D++L+ A+ AA I+ K G AEA AL+V + + + + + R VDVL+NNAGLQHV+ LE+FP KW F++QVMLTGVA LTRA+LP M E+GFGRIVNIGSIH+++ASP+KSAYVAAKHGL+GFSKVIALET D DITINT+CPSYVKTPLVD QIA+QA+T GISE +V++++ML+PMPK FI + EL GTT FL S AARNMTGQTLVLDGGWTV+
Sbjct: 2 RSILITGAASGIGAGIAHELAAA-GHHVIVSDLSLDGAEAVAADIRGKGGSAEAVALDVTSDESVAAALAAVSRP---VDVLVNNAGLQHVSPLEEFPIAKWDFLVQVMLTGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVIALETGDTDITINTVCPSYVKTPLVDKQIADQARTRGISESDVVSQVMLKPMPKGVFIEMDELAGTTAFLISHAARNMTGQTLVLDGGWTVQ 252
BLAST of EWM26283.1 vs. NCBI_GenBank
Match: gi|655565244|ref|WP_028919006.1| (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas suwonensis]) HSP 1 Score: 340.117 bits (871), Expect = 2.506e-115 Identity = 166/255 (65.10%), Postives = 202/255 (79.22%), Query Frame = 0
Query: 9 RRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
R ITGA SGIGAGIA LA G VI +D++L+ A+ AA I+ K G AEA AL+V + + + + + R V+VL+NNAGLQHV+ LE+FP KW F++QVMLTGVA LTRA+LP M E+GFGRIVNIGSIH+++ASP+KSAYVAAKHGL+GFSKVIALET+D DITINT+CPSYVKTPLVD QIA+QA+T GISE +V+ ++ML+PMPK FI + EL GTT FL S AARNMTGQTLVLDGGWTV+
Sbjct: 2 RSILITGAASGIGAGIAHELAAA-GHHVIVSDLSLDGAEAVAADIRGKGGSAEAVALDVTSDESVAAALASISRP---VEVLVNNAGLQHVSPLEEFPIAKWDFLVQVMLTGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVIALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISESDVVIQVMLKPMPKGVFIEMDELAGTTAFLISHAARNMTGQTLVLDGGWTVQ 252 The following BLAST results are available for this feature:
BLAST of EWM26283.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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