EWM26296.1, cds4377 (CDS) Nannochloropsis gaditana

Overview
NameEWM26296.1
Unique Namecds4377
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:456672..457409 +
Alignment locationCM002463.1:457459..457461 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26296.1
Productatp-binding cassette superfamily
Orig transcript idgnl|cribi|Naga_102427g1.8501.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:456672..457409 +
CM002463.1supercontigCM002463.1:457459..457461 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0005215transporter activity
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR026082ABC_A
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like
Homology
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|585108301|gb|EWM26296.1| (atp-binding cassette superfamily [Nannochloropsis gaditana])

HSP 1 Score: 504.982 bits (1299), Expect = 0.000e+0
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
Query:    1 MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR 246
            MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR
Sbjct:    1 MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR 246          
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|553178451|ref|XP_005852555.1| (antibiotic transport system ATP-binding protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295978|gb|EKU23277.1| antibiotic transport system ATP-binding protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 496.123 bits (1276), Expect = 8.627e-172
Identity = 238/246 (96.75%), Postives = 243/246 (98.78%), Query Frame = 0
Query:    1 MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR 246
            MLNFMCG++L  +T++MTFIP TRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR
Sbjct:    4 MLNFMCGVVLVTLTVMMTFIPITRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR 249          
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|553179804|ref|XP_005852765.1| (antibiotic transport system ATP-binding protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295768|gb|EKU23067.1| antibiotic transport system ATP-binding protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 496.893 bits (1278), Expect = 8.682e-167
Identity = 238/246 (96.75%), Postives = 243/246 (98.78%), Query Frame = 0
Query:    1 MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR 246
            MLNFMCG++L  +T++MTFIP TRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR
Sbjct:  425 MLNFMCGVVLVTLTVMMTFIPITRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR 670          
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|585108297|gb|EWM26294.1| (atp-binding cassette superfamily [Nannochloropsis gaditana])

HSP 1 Score: 439.113 bits (1128), Expect = 4.964e-155
Identity = 214/223 (95.96%), Postives = 220/223 (98.65%), Query Frame = 0
Query:    1 MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVG 223
            MLNFMCG++L  +T++MTFIP TRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEE+RVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVG
Sbjct:    1 MLNFMCGVVLVTLTVMMTFIPITRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEEDRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVG 223          
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|298711718|emb|CBJ32765.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 202.986 bits (515), Expect = 5.054e-56
Identity = 113/257 (43.97%), Postives = 157/257 (61.09%), Query Frame = 0
Query:    3 NFMCGLILAMITMIMT-FIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGK-------DEAVLEEENRVRREATIDTMKAGG---DVVVIKDMTKTYR---GGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYA 245
            N++ GLIL + T IM+ F     DV   +  + R+ P FA G+GL+N+ F +FF  LD K YT  S+ I G +++YM++  V++  L+L  E   R       L G    ++     GK       DE  ++E+ R    A +D +  GG   DVV +K + K Y    G K+AV+  SLGIP GECFGLLG+NGAGK++TL+IL+ E PP++G  +L G+D+  NPE + RLVGYCPQFDALF+ LTG+EHL LYA
Sbjct: 1397 NWITGLILPIATTIMSLFEGAVSDVGRGMAAVLRIVPSFALGDGLMNMSFMEFFGFLDDKDYTALSMRITGNALLYMAICGVIFLGLLLVTE---RASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDEDVR----AEMDRVAGGGADNDVVKVKGLRKVYPASGGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYA 1646          

HSP 2 Score: 91.6633 bits (226), Expect = 2.257e-17
Identity = 52/128 (40.62%), Postives = 74/128 (57.81%), Query Frame = 0
Query:  125 LEEENRVRREATIDTMK---AGGDVVVIKDMTKTYR----GGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYA 245
             E E R   E   D ++   AGG+ V I+ +TK Y+    G KLAV  + L + +G+   LLG NGAGKTTT+ +LT   P +SG  ++ G D+  +   +R  +G CPQ D L+  LT +EHL +YA
Sbjct:  648 FESEGRDSVEPVEDELRSQVAGGECVAIRGLTKEYKNSTGGSKLAVDKLDLTMYSGQITALLGHNGAGKTTTIGMLTGMIPVTSGSAFVAGRDVKTDMVSIRNSLGVCPQHDILYPDLTVREHLRMYA 775          
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|1214679822|gb|OWY99345.1| (ABC transporter, partial [Phytophthora megakarya])

HSP 1 Score: 198.749 bits (504), Expect = 3.235e-55
Identity = 100/247 (40.49%), Postives = 153/247 (61.94%), Query Frame = 0
Query:    1 MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDF--FSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYA 245
            M+NF+ G++L ++  I+  I +T+DV   LV+ +RL+P F  G GLLN+V  +       D+ + +P+S ++ G+ MIY+ V  ++Y +L + ++Y +  P V   + G  +         +DEA  E+ + V+    +   +A  D+V +  + K Y GGK+AVR +S G+  GECFG LG+NGAGKTTT+ +LT +  P+ G   LGG+DI      VRR +GYCPQFDALF+LLT +EHLEL+A
Sbjct:  276 MINFIIGVVLMVVAFILDVIESTKDVNAVLVFFWRLSPLFNLGYGLLNLVLNELTTIRESDESKTSPFSPDLMGWEMIYLFVTAILYGLLAVGIDYAMTFPKVKDWMSGNDNV--------QDEAYEEDVDVVKEAQRVANGEADSDIVKLASLRKVYHGGKVAVRNLSFGLKRGECFGFLGINGAGKTTTMKMLTGDELPTHGTATLGGFDILTQQIEVRRQIGYCPQFDALFELLTVREHLELFA 514          
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|695400574|ref|XP_009522550.1| (ABC transporter lipid export ABCA family [Phytophthora sojae] >gi|348680017|gb|EGZ19833.1| ABC transporter lipid export ABCA family [Phytophthora sojae])

HSP 1 Score: 198.364 bits (503), Expect = 2.355e-54
Identity = 100/247 (40.49%), Postives = 153/247 (61.94%), Query Frame = 0
Query:    1 MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDF--FSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYA 245
            M+NF+ G++L ++  I+  I +T+DV   LV+ +R +P F  G GLLN+V  +       D+ + +P+S ++ G+ MIY+ V  ++Y +L + ++Y +  P V   + G  + +        DE   E+ + V+    +   +A GD+V +  + K YRGGK+AVR +S G+  GECFG LG+NGAGKTTT+ +LT +  P+ G   LGG+DI      VRR +GYCPQFDALF+LLT +EHLEL+A
Sbjct: 1434 MINFVLGVVLMVVAFILDVIESTKDVNAVLVFFWRFSPLFNLGYGLLNLVLNELTTIRESDETKSSPFSTDLMGWEMIYLFVTAILYGLLAVGIDYAMTFPKVKDWMSGSDNVV--------DEPYEEDVDVVKEAERVANGEADGDIVKLAGLRKVYRGGKVAVRNLSFGLKRGECFGFLGINGAGKTTTMKMLTGDELPTHGTATLGGFDILTQQIDVRRQIGYCPQFDALFELLTVREHLELFA 1672          

HSP 2 Score: 74.7146 bits (182), Expect = 1.139e-11
Identity = 54/196 (27.55%), Postives = 95/196 (48.47%), Query Frame = 0
Query:   74 SMIYMSVETVVYFVLVLWVEYLIRR-------------PTVSKLLEGGSSSMAAK-DCSGKDEAVLE------EENRVRREATIDTMKAGGDVVVIKDMTKTYR---GGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR 246
            S++  + +TV+Y +L L+ E ++ +             P+  +        +  K D     EA+L+        N     A +   +  G+V+ ++ + K +    G K+AV+G++L +   +   LLG NGAGKTT +S+LT    P+SG     G  + ++ + +R  +G C Q D LF+ LT +EHL  + R
Sbjct:  629 SLLMFAFDTVLYTLLGLYFEKVVPKEHGTTLKWYFPVSPSYWRNRRKTREELKVKLDADHPSEALLDSVSVDVNHNIEPVNAELREQERQGEVLAVQRLRKVFPVPGGEKVAVQGLNLTMYKNQITCLLGHNGAGKTTLISMLTGMIAPTSGDATFRGLSVKEDMDEIRESLGLCFQHDVLFEELTVEEHLLFFGR 824          
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|953496985|emb|CEG41294.1| (atp-binding cassette superfamily [Plasmopara halstedii])

HSP 1 Score: 197.593 bits (501), Expect = 3.813e-54
Identity = 102/248 (41.13%), Postives = 158/248 (63.71%), Query Frame = 0
Query:    1 MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFS--SLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREAT-IDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYA 245
            M+NF+ G++L + + I+  I +TRD    LV+++RL+P F  G GLLN+V  +  +    D+   +P+S  I G+ MIY+ +  ++Y +L + ++Y +  P V   + G S +         ++   E++  V +EA  + + +A GD++ + ++ K YRGGK+AVR +S G+  GECFG LG+NGAGKTTT+ +LT +  P+SG   LGG+DI      VRR +GYCPQFDALF+LLT +EHLEL+A
Sbjct: 1424 MINFITGVVLMIASFILDVIDSTRDTNAMLVFVWRLSPLFDLGYGLLNLVLHEITTIRESDETPTSPFSTQIMGWEMIYLFLTAILYGLLAVGIDYAMTFPMVKDWMSGRSET---------NDEEYEDDVDVEKEAQRVASGEADGDIIKLANLRKVYRGGKVAVRNLSFGLMQGECFGFLGINGAGKTTTMKMLTGDELPTSGTATLGGFDILTQQIEVRRQIGYCPQFDALFELLTVREHLELFA 1662          

HSP 2 Score: 74.3294 bits (181), Expect = 1.705e-11
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 0
Query:  144 GDVVVIKDMTKTYR---GGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR 246
            G V+ ++ + K +    G K+AV+G++L +   +   LLG NGAGKTT +S+LT    P+SG     G  I  + +++R  +G C Q D LF+ LT +EHL  + R
Sbjct:  713 GQVLAVQRLRKVFSVPGGKKVAVQGLNLTMYKNQITCLLGHNGAGKTTLISMLTGMIAPTSGDATFRGMSICRDMDLIRESLGICFQHDVLFEELTVEEHLIFFGR 818          
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|298711719|emb|CBJ32766.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 197.208 bits (500), Expect = 5.242e-54
Identity = 115/259 (44.40%), Postives = 156/259 (60.23%), Query Frame = 0
Query:    3 NFMCGLILAMITMIMTFIP-TTRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGS--SSMAAKDCSGKD-----EAVLEEENRVRRE--ATIDTMKAGG---DVVVIKDMTKTY---RGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYA 245
            N++ GLIL + T IM F      D+   +  L RL P +A G+GL+ + F    S  +  +YTP    IAG S+IYM V +VVYFVL+L  E         ++  GGS  S +  K   G+         L +E+ + ++  A +D + AG    DVV +  + K Y    G K+AV+  SLGIP GECFGLLG+NGAGK++TL+IL+ E PP++G   LGG+D+  NPE + RLVGYCPQFDALF+ LTG+EHL LYA
Sbjct: 1417 NWITGLILPIATSIMAFFDGKVSDIGDGIAALARLIPQYALGSGLMKMSFIPILSFFNNTEYTPLDGAIAGNSLIYMGVCSVVYFVLLLVFE---------RISAGGSFLSGIYGKLVLGRSLKKLTPKQLGDEDNIDKDVRAEMDRVAAGAADNDVVKVAGLRKVYPVSNGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYA 1666          

HSP 2 Score: 91.6633 bits (226), Expect = 2.134e-17
Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 0
Query:  126 EEENRVRREATIDTMK---AGGDVVVIKDMTKTYR----GGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYA 245
            E E +V  E   D ++   A G+ V I+ + K Y+    G KLAV  + L + +G+   LLG NGAGKTTT+ +LT   P +SG  ++ G D+  +   +RR +G CPQ D L+  LT +EHL +YA
Sbjct:  671 ESEGKVSVEPVDDELRMQVAAGECVAIRGLAKEYKNSTGGSKLAVDNLDLTMYSGQITALLGHNGAGKTTTIGMLTGMIPVTSGSAFVAGRDVIADMANIRRSLGVCPQHDILYPDLTVREHLRMYA 797          
BLAST of EWM26296.1 vs. NCBI_GenBank
Match: gi|1214696899|gb|OWZ10303.1| (ABC transporter [Phytophthora megakarya])

HSP 1 Score: 196.823 bits (499), Expect = 6.912e-54
Identity = 106/246 (43.09%), Postives = 153/246 (62.20%), Query Frame = 0
Query:    1 MLNFMCGLILAMITMIMTFIPTTRDVALKLVYLFRLAPPFAAGNGLLNVVFTD--FFSSLDQKQYTPYSLNIAGYSMIYMSVETVVYFVLVLWVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYRGGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELY 244
            M+NF+ G++L +++ IM+ I +T DV   LV+++RL+P F  G GLL +   D  +      ++ +P+S +I G+ + Y+ V  +VY VL ++++Y    P V   + G   S  A D     E V +E +RV     +    A GD V +  + K Y GGK+AVR +S G+  GECFG LG+NGAGKTTT+ +LT + PPSSG   LGG++I +    VRR +GYCPQFDALFDLLT +EHLEL+
Sbjct: 1362 MINFVIGVVLMIVSFIMSVIGSTSDVDSVLVFIWRLSPLFNLGMGLLQLTLNDITYIRYTKDEKTSPFSGDIMGFELAYLLVTAIVYMVLAVYLDYSKTFPKVKNEIAGIDDSTLAID-----EDVKKEADRVVYR--VANGGADGDAVKLMGLRKVYPGGKVAVRDLSFGLQRGECFGFLGINGAGKTTTMKMLTGDVPPSSGTATLGGFNILNEQIEVRRQIGYCPQFDALFDLLTVREHLELF 1600          

HSP 2 Score: 69.3218 bits (168), Expect = 7.728e-10
Identity = 45/156 (28.85%), Postives = 78/156 (50.00%), Query Frame = 0
Query:   94 YLIRRPTVSKLLEGGSSSMAAKDCSGKDEAVLEEENRVRREATIDTMKAGGDVVVIKDMTKTYR---GGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYAR 246
            Y    PT  +       ++  +D    D A+    N  R  A +   +  GD + ++ + K +    G K+AV+G++L +   +   LLG NGAGKTT +S+LT    P++G     G  + ++ + +R+ +G C Q D LF  L+ +EHL  + +
Sbjct:  601 YFPLSPTYWRTRRQRPVTVQTQDALLDDVALDVNPNIERVNAELREQERQGDALTVQRLRKVFAVPGGEKVAVQGLNLTMYKDQITCLLGHNGAGKTTLISMLTGMTAPTTGNATYRGMSVNEDMDELRQSLGICFQHDVLFPDLSVEEHLLFFGQ 756          
The following BLAST results are available for this feature:
BLAST of EWM26296.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108301|gb|EWM26296.1|0.000e+0100.00atp-binding cassette superfamily [Nannochloropsis ... [more]
gi|553178451|ref|XP_005852555.1|8.627e-17296.75antibiotic transport system ATP-binding protein, p... [more]
gi|553179804|ref|XP_005852765.1|8.682e-16796.75antibiotic transport system ATP-binding protein, p... [more]
gi|585108297|gb|EWM26294.1|4.964e-15595.96atp-binding cassette superfamily [Nannochloropsis ... [more]
gi|298711718|emb|CBJ32765.1|5.054e-5643.97conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214679822|gb|OWY99345.1|3.235e-5540.49ABC transporter, partial [Phytophthora megakarya][more]
gi|695400574|ref|XP_009522550.1|2.355e-5440.49ABC transporter lipid export ABCA family [Phytopht... [more]
gi|953496985|emb|CEG41294.1|3.813e-5441.13atp-binding cassette superfamily [Plasmopara halst... [more]
gi|298711719|emb|CBJ32766.1|5.242e-5444.40conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214696899|gb|OWZ10303.1|6.912e-5443.09ABC transporter [Phytophthora megakarya][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4387rna4387Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications