EWM30311.1, cds437 (CDS) Nannochloropsis gaditana

Overview
NameEWM30311.1
Unique Namecds437
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1081507..1082916 -
Alignment locationCM002455.1:1081085..1081207 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30311.1
ProductNuclear protein DGCR14
Orig transcript idgnl|cribi|Naga_100003g45.1828.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1081507..1082916 -
CM002455.1supercontigCM002455.1:1081085..1081207 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR019148Nuclear_protein_DGCR14
Homology
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|585112970|gb|EWM30311.1| (Nuclear protein DGCR14 [Nannochloropsis gaditana])

HSP 1 Score: 1028.85 bits (2659), Expect = 0.000e+0
Identity = 510/510 (100.00%), Postives = 510/510 (100.00%), Query Frame = 0
Query:    1 MEAVVARGAQGNDPLARDKNEKGRAAAKGGAQAIAKAYKRGLPTPSPLRRMEDPCADHIMPSRSEKKSKTQNSLMLPPAVPPSRRRRKSPQVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLVLSGGSLEQIVSRADTGAGLGDSGHGLGSETPLSTAASSDAPTLPPLPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLLLAGNGGNARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALESQRGQTGGTGSRGTASGSWSTPSLEEGSSRTGSKVTENLLNI 510
            MEAVVARGAQGNDPLARDKNEKGRAAAKGGAQAIAKAYKRGLPTPSPLRRMEDPCADHIMPSRSEKKSKTQNSLMLPPAVPPSRRRRKSPQVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLVLSGGSLEQIVSRADTGAGLGDSGHGLGSETPLSTAASSDAPTLPPLPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLLLAGNGGNARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALESQRGQTGGTGSRGTASGSWSTPSLEEGSSRTGSKVTENLLNI
Sbjct:    1 MEAVVARGAQGNDPLARDKNEKGRAAAKGGAQAIAKAYKRGLPTPSPLRRMEDPCADHIMPSRSEKKSKTQNSLMLPPAVPPSRRRRKSPQVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLVLSGGSLEQIVSRADTGAGLGDSGHGLGSETPLSTAASSDAPTLPPLPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLLLAGNGGNARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALESQRGQTGGTGSRGTASGSWSTPSLEEGSSRTGSKVTENLLNI 510          
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|813200086|ref|XP_012209614.1| (hypothetical protein SPRG_14777 [Saprolegnia parasitica CBS 223.65] >gi|641525215|gb|KDO19698.1| hypothetical protein SPRG_14777 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 172.17 bits (435), Expect = 1.143e-44
Identity = 131/409 (32.03%), Postives = 198/409 (48.41%), Query Frame = 0
Query:   91 QVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLVL------------SGGSLEQIVSRA------DTGAGLGD--------SGHGLGSETPLSTAASSDAPTLPPLPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLLLAGNGGNARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALESQRGQ 473
            QVL+ED++V+A+  IIERDFFP+LPKL  Q  WL AL ++    +A+V++ +             S   LE +   +      D GA   D        S     +E   +   + +AP+     +TL+ FLA   SED+AAF++L E+    H++KY W +      T   +L LLP+G  MT+E +    +A + K  L D RP AP+TW  RA+N L+F P    E +R   +     T   LLLE    NGT P        + R G  AK P   V++N+RF +  L+      S+ LP +              A AA  ++ E    MTPL+VPG   + P+MTWG++ +TP+           ++P E+       R  F I+    RE++A A++++  Q
Sbjct:    7 QVLEEDAYVEALDAIIERDFFPDLPKLKYQTMWLDALATKNAALIAQVRQYIANDQQKRPQTKTSSRSQLEGLTGSSKRKRADDEGASAWDVPTPPRTSSDIEEPTEDDATVGDAGEAPSKATATMTLNHFLATHTSEDNAAFEELQEKAVAEHKKKYHWAFDDDHATT---RLLLLPDGTKMTQERRLLMDKACDTKLALEDSRPVAPDTWTFRARNQLLFPPDL--ETSRAICKLEATTTGDVLLLE----NGTLPAPDRALTKSLRTGAVAKKPMETVYANSRFSSAFLA------SQELPPD-------------IAPAAPLDLVE----MTPLIVPGDGNESPLMTWGDIAATPM-----------ILPSETP----AHRPVFEIKDKSKREKLALAMDAKNKQ 368          
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|813199638|ref|XP_012209390.1| (hypothetical protein SPRG_14731 [Saprolegnia parasitica CBS 223.65] >gi|641525431|gb|KDO19888.1| hypothetical protein SPRG_14731 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 170.629 bits (431), Expect = 6.173e-44
Identity = 133/412 (32.28%), Postives = 198/412 (48.06%), Query Frame = 0
Query:   91 QVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLV-------------------LSGGSLEQIVSRADTGAGLGD--------SGHGLGSETPLSTAASSDAPTLPPLPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLLLAGNGGNARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRG--DALGSRQGFHIQPTGSRERVANALESQRGQ 473
            QVL+ED++V+A+  IIERDFFP+LPKL  Q  WL AL ++    +A+V++ +                   L+GGS  +     D GA   D        S     +E   +   + +AP+     +TL+ FLA   SED+AAF++L E+    H++KY W +      T   +L LLP+G  MT+E +    +A + K  L D RP AP+TW  RA+N L+F P    E +R   +     T   LLLE    NGT P        + R G  AK P   V++N+RF +  L+      S+ LP +              A AA  ++ E    MTPL+VPG     P+MTWG++ +TP+ +       +   P   R    A   R  F I+    RE++A A++++  Q
Sbjct:   14 QVLEEDAYVEALDAIIERDFFPDLPKLKYQTMWLDALATKNAALIAQVRQYIANDQQKRPQTKTSSRSQQSLTGGSKRKRAD--DEGASAWDVPTPPRTSSDIDEPTEDDATVDDAGEAPSKATATMTLNHFLATHTSEDNAAFEELQEKAVAEHKKKYHWAFDDDHANT---RLLLLPDGTKMTQERRLLMDKACDTKLALEDARPVAPDTWTFRARNQLLFPPDL--ETSRAICKLEATTTGDVLLLE----NGTPPAPDRALTKSLRTGAVAKKPMETVYANSRFSSAFLA------SQELPPD-------------IAPAAPLDLVE----MTPLIVPGDGNGSPLMTWGDIAATPMILPSETPARTWCSPRAERALIHAPVDRPVFEIKDKSKREKLALAMDAKNKQ 391          
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|669157242|ref|XP_008614183.1| (hypothetical protein SDRG_09992 [Saprolegnia diclina VS20] >gi|530734000|gb|EQC32242.1| hypothetical protein SDRG_09992 [Saprolegnia diclina VS20])

HSP 1 Score: 166.777 bits (421), Expect = 1.153e-42
Identity = 129/414 (31.16%), Postives = 193/414 (46.62%), Query Frame = 0
Query:   91 QVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLVLSGGSLEQIVSRADTGAGLGDSGHGLGSETPLSTAASSDAPTLPPL------------------------PLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQP--ALLLEDDEANGTRPLLLAGNGG---NARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRA--LPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALESQRGQ 473
            QVL+ED++V+A+  IIERDFFP+LPKL  Q  WL AL ++    +A+V R  ++    ++  +R  + +    +G G          +S D PT P +                         +TL+ FLA   SED+AAF++L E+    H++KY W +      T   +L LLP+G  MT+E++    +A + K  L D RP AP+TW  RA+N L+F P      A      +  AT P   LLLE    NG  P     NG    + R G  AK P   V++N+RF    L+ +   P  A   PL+                          V MTPL+VPG +   P+MTWG++ +TP+           ++P E+       R  F I+    RE++A A++++  Q
Sbjct:   14 QVLEEDAYVEALDAIIERDFFPDLPKLKYQTMWLDALATKNAALIAQV-RQYIANDQQKRPQTRTSSRSQQAHTGGGKRKRADDEATSSWDVPTPPRVSSDVDEPNEDDATIDDAGEAPSTATMTLNHFLATHTSEDNAAFEELQEKAVAEHKKKYHWAFDDDHATT---RLLLLPDGTRMTKEQRLLMDKACDTKLALEDARPAAPDTWTFRARNQLLFPPDLATSRAIC----KLEATAPGDVLLLE----NGPAP----QNGALTKSLRTGAVAKKPMETVYANSRFSTAFLATQDLAPDVAPDAPLD-------------------------LVEMTPLIVPGDQNGSPLMTWGDIAATPM-----------ILPSETP----AHRPVFEIKDKSKREKLALAMDAKNKQ 371          
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|673030542|ref|XP_008869232.1| (hypothetical protein H310_06092 [Aphanomyces invadans] >gi|574475627|gb|ETW02627.1| hypothetical protein H310_06092 [Aphanomyces invadans])

HSP 1 Score: 167.548 bits (423), Expect = 1.190e-42
Identity = 132/431 (30.63%), Postives = 206/431 (47.80%), Query Frame = 0
Query:   91 QVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLVLSG-----------------GSLEQIVSRADTG--------AGLGDSGHGLGSETPLSTAASSDAPTLPPLPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHER--GRDGATQPALLLED-DEANGTRPLLLAGNGGNA---------RVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGA-EGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALES---QRGQTGGTGSR 480
             +LDED +VDA+ +IIERDFFP+L +L  Q  WL A+ S   R + E +  +++                   S   IV   ++         A  G        ETP  T +++ A + P   +TL++F+A+  SED+AAF++L E+    H+RKY W Y  P    G  KL+LL +G  ++ E ++   +A + K  L D RP  P+TW  R +N L F P  L+ +  + +     D A    L LE+ D  + T PLL  G+   +         R G A K P   V++N+RF +  L                    S+  AA+  +    EV + FVPMTPLLVPG  +   P++TWG +++TP+ + +            +  D    R  F I+ + +RE++A+A+++   QR +   T SR
Sbjct:    9 HILDEDEYVDALDKIIERDFFPDLERLKHQAMWLDAVASNNPRLIQEAREYLINQRSSQEASRSSSHPESLRKSRTPIVETCESSWDQPTPPRASQGVQVDNGADETPSITPSTAGA-SHPTSSMTLNEFIAKHTSEDNAAFEELQEKAINDHKRKYHWAYDDPA-NRGDAKLHLLNDGTWISRERRQLMDKACDTKLTLEDSRPAVPDTWRYRVRNPLHFPPD-LDTSRSICKVPPVSDLAGSSVLQLENGDTTSTTMPLLKGGSDEGSVIVVAKRTKRTGAAPKQPMETVYANSRFRSAFL--------------------SAQDAASDVNPLNEEVKD-FVPMTPLLVPGGPDAASPMITWGSIDATPMILRDDV----------AATDTKPGRPTFVIKESSAREKLAHAMDAKNKQRSKARQTPSR 405          
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|698787256|ref|XP_009826660.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574117744|gb|ETV83225.1| hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 162.54 bits (410), Expect = 7.639e-41
Identity = 128/431 (29.70%), Postives = 197/431 (45.71%), Query Frame = 0
Query:   91 QVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLVL----------------------------SGGSLEQIVSRADTGAGLGDSGHGLGSETPLSTAASSDAPTLPPLPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLL-LAGNG-----------GNARVGLAAKAPKRLVHSNTRFHAGSLS----WKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPG-AEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDAL---GSRQGFHIQPTGSRERVANALESQRGQ 473
             VL+ED +VDA+ +IIERDFFP+L +L  Q  WL AL +   R + EV+  +L                            S  + +Q      +   L        + T + + +++         +TL++F+A+  SED+AAF++L E+    H+RKY W Y       G  KL+LL +G  ++ E ++   +A + K  L D RP AP+TW  R +N L F P  L+ N  + +     A   +  L   E  GT P L  AG+G           G  R G AAK P   V++N+RF    LS     K  DP                          ++  + FVPMTPLLVPG A+   P++TWG +++TP+ +               R DAL   G +  F I+ + +RE++A+A++++  Q
Sbjct:    9 HVLEEDEYVDALDKIIERDFFPDLQRLKHQTMWLDALATNNRRLIQEVREYLLHQQSSQDASRSSSHPDSVPKTRTPLLATSESAWDQPTPPRQSSDELNVDLDAAAAATSVESTSNATTIVTTTSTMTLNEFIAKHTSEDNAAFEELQEKAVNDHKRKYHWAYED-TANRGDAKLHLLNDGTWISRERRQLMDKACDTKLALEDSRPAAPDTWTFRVRNPLHFPPD-LDTNRSICKVPPLNAPPLSSALLQLEHGGTAPTLGAAGDGNPSAASVVAANGTKRTGAAAKPPMETVYANSRFRTAFLSAQDEMKDVDP-------------------------MKDELQNFVPMTPLLVPGAADAASPMITWGSIDATPVIL---------------REDALIDAGRKTTFVIKDSSAREKLAHAMDAKNKQ 397          
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|1173945800|gb|OQR94390.1| (hypothetical protein ACHHYP_01404 [Achlya hypogyna])

HSP 1 Score: 155.992 bits (393), Expect = 7.976e-39
Identity = 132/440 (30.00%), Postives = 201/440 (45.68%), Query Frame = 0
Query:   91 QVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLVLSGGSLEQIVSRADTGAGLG--------DSGHGLGSETPLSTAASSDAPT--------------LPP--LPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLLLAGNGGNARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVA---NALESQRGQTGGTGS--RGTASGSWSTPSLEEGSSRTGS 501
            QVL+ED++V+A+  IIERDFFP+LPKL  Q  +L A+ ++   +L E  R  ++    ++  +RA +    G        DS       TP   A+   +P                PP    +TL+ FLA   SED+AAF++L ++  EAH++KY W +      T    L LLP+G MMT++ +    +A + K  L D RP  PETW  RA+N L+F P  +E +  + +  +  ++   LLLE  ++   +  +       +R G   K P   V+SN+RF    LS +   P  A     P  D                     V MTPL+VPG     P+MTWG + +TP+ +               + DA      F I+    RE++A   +A   QR +   T +  RGT +   +TP+      R G+
Sbjct:    7 QVLEEDAYVEALDAIIERDFFPDLPKLKYQTMYLDAVATKN-PALIEQVRQYIASDQKKRPQARASSSTRHGTAKRPRHEDSASAWDMPTPPREASDVTSPNNSASGAESQEVSGAAPPATATMTLNHFLATHTSEDNAAFEELQDKAVEAHKKKYHWAFDDDHANT---HLRLLPDGTMMTKDRRLLMDKACDTKLALEDARPAGPETWTFRARNQLLFPPD-METSRAICKVPQSESS--VLLLEGGKSTSQQLAV------KSRTGAVTKKPMETVYSNSRFSDAFLSLQDVIPDEA---PAPALD--------------------LVEMTPLIVPGEHNASPLMTWGAIAATPMIL---------------KSDAPTGGPSFQIKEASRREKLALEMDAKNKQRMKAKKTPTPFRGTPAHGRATPTPHLSIFRAGA 395          
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|1214712836|gb|OWZ23757.1| (hypothetical protein PHMEG_0001327 [Phytophthora megakarya])

HSP 1 Score: 154.836 bits (390), Expect = 1.343e-38
Identity = 122/385 (31.69%), Postives = 185/385 (48.05%), Query Frame = 0
Query:   92 VLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQLRSLAEVQRLVLSGGSLEQIVSRADTGAGLGDSGHGLGSETPLSTAASSDAPTLPP------LPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLLLAGNGGNARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALESQ 470
            VL+E+ +VDA+ +IIERDFFP+LPKL RQ + L+  E            L  +  +L    ++ +       SG G    TP++   +  +P + P        +TL++F+A   SED+ +F++L E+  + H R+Y W +     + G  KL+LL NG  ++ +EQR   + A A     DDRP+APETW  RA+N L+F P  LE            AT+    +E     G++  LL  N  N R G   +A K  V++N+RF                           SS      ++ RE     VPMTP++ PG   + P+MTWG++E TP  +      GS   P     + + +   F +Q T  RE++AN LES+
Sbjct:    6 VLEEEEYVDALDQIIERDFFPDLPKLKRQAELLRDEED-----------LPWTNTTLRAATTQGNMSVRSDASGSGWDQPTPMAEQLTG-SPVVEPAEDKSQASMTLNRFVATHTSEDNESFNELQEKAVKDHERRYHWAFDD---KKGDPKLHLLTNGTWIS-KEQRLLADKACAPKGPKDDRPSAPETWKYRARNPLLF-PPELE------------ATRDICQVEP----GSKSQLLLENVSNQRSGRPPRASKTTVYANSRF---------------------------SSEHVRGISSSRE-DYSLVPMTPIIAPGVH-ESPLMTWGDIEGTPTIL------GSRTTP-----ERILNTPTFEVQNTSRREKLANRLESE 317          
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|953502921|emb|CEG35689.1| (Nuclear protein ES2 [Plasmopara halstedii])

HSP 1 Score: 153.295 bits (386), Expect = 5.574e-38
Identity = 120/387 (31.01%), Postives = 185/387 (47.80%), Query Frame = 0
Query:   92 VLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALESRQ--LRSLAEVQRLVLSGGSLEQIVSRADTGAGLGDSGHGLGSETPLSTAASSDAPTLPP------LPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLLLAGNGGNARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALESQ 470
            VL+ED +V+ +G IIERDFFP+LPKL +Q + L A E  +  LR+++                +  DT      S  G    TP +  A+ D   +          +TL++F+A   SED+ +F +L E+    H+RKY W +   + + G  KL+LL NG  ++ ++QR+ V+ A A   L DDRP  PETW  RA+N L+F P  LE    + +     A++  LLLE D               N+R  L  ++  + V++N+RF +  +                       S     S+A R+     VPMTP++ PG +   P+MTWG++E+TP            ++  E+    + +   F IQ T  RE+VA  LES+
Sbjct:    6 VLEEDEYVETLGLIIERDFFPDLPKLQKQRRLLLADEGTETALRAIS---------------TTSDDTSVRSNASVVGWDQPTPYAKLAAGDRVQVEDDSNSVMASMTLNRFVATHTSEDNESFKELQEKAVNDHQRKYHWAFDENK-DKGDSKLHLLANGTWIS-KDQRKLVDEACAPKGLKDDRPGFPETWRYRARNPLIFQP-ELEATRDICQIK--AASKGQLLLEKD--------------PNSRSRLPPRSRAKTVYANSRFFSNDVQL-------------------VESECGGGSSASRD-KYSLVPMTPIIAPGVDAS-PLMTWGDIEATPT-----------ILDNEATPGRIWNTPSFEIQDTSRREKVATRLESE 326          
BLAST of EWM30311.1 vs. NCBI_GenBank
Match: gi|301117916|ref|XP_002906686.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262108035|gb|EEY66087.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 150.599 bits (379), Expect = 3.407e-37
Identity = 131/390 (33.59%), Postives = 187/390 (47.95%), Query Frame = 0
Query:   92 VLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQALE-----SRQLRSLAEVQRLVLSGGS------LEQIVSRADTGAGLGDSGHGLGSETPLSTAASSDAPTLPPLPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQPALLLEDDEANGTRPLLLAGNGGNARVGLAAKAPKRLVHSNTRFHAGSLSWKGRDPSRALPLERPRSDASSSSAATSASAAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALESQ 470
            VL+ED +V+A+G+IIERDFFP+LPKL +Q + L+  E        LR+ A   R V+S  S       +Q     +  A L + GH        ST AS          +TL+ F+A   SED+ +F++L E+  + H+R+Y W +     + G  KL+LL NG  ++ +EQR+  +AA A     DDRP+APETW  RA+N L+F P   E +A      RD      LLLE              N   +R+ L  +  K++V++N+RF                      SD +   +               VPMTPL+ PG +   P+MTWG++E TP  +      GS   P  SR     S   F +Q T  RE++AN LESQ
Sbjct:    6 VLEEDEYVEALGQIIERDFFPDLPKLKKQTELLRDEEGLPWTDTTLRA-ASTSRGVVSVRSNANESGWDQPTPMVEQYA-LDEDGHD-------STKAS----------MTLNHFVATHTSEDNESFNELQEKAVKDHQRRYHWAFDD-DKDKGDPKLHLLTNGTWIS-KEQRQIADAACAPKGPKDDRPSAPETWTYRARNPLLFPP---ELDA-----TRDICQVGQLLLE--------------NSSKSRLRLPPRPGKKIVYANSRFC---------------------SDGTKDYS--------------LVPMTPLIAPGVDAS-PLMTWGDIEGTPAML------GSQATPERSR-----STPSFEVQETSQREKLANRLESQ 305          
The following BLAST results are available for this feature:
BLAST of EWM30311.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112970|gb|EWM30311.1|0.000e+0100.00Nuclear protein DGCR14 [Nannochloropsis gaditana][more]
gi|813200086|ref|XP_012209614.1|1.143e-4432.03hypothetical protein SPRG_14777 [Saprolegnia paras... [more]
gi|813199638|ref|XP_012209390.1|6.173e-4432.28hypothetical protein SPRG_14731 [Saprolegnia paras... [more]
gi|669157242|ref|XP_008614183.1|1.153e-4231.16hypothetical protein SDRG_09992 [Saprolegnia dicli... [more]
gi|673030542|ref|XP_008869232.1|1.190e-4230.63hypothetical protein H310_06092 [Aphanomyces invad... [more]
gi|698787256|ref|XP_009826660.1|7.639e-4129.70hypothetical protein, variant 1 [Aphanomyces astac... [more]
gi|1173945800|gb|OQR94390.1|7.976e-3930.00hypothetical protein ACHHYP_01404 [Achlya hypogyna... [more]
gi|1214712836|gb|OWZ23757.1|1.343e-3831.69hypothetical protein PHMEG_0001327 [Phytophthora m... [more]
gi|953502921|emb|CEG35689.1|5.574e-3831.01Nuclear protein ES2 [Plasmopara halstedii][more]
gi|301117916|ref|XP_002906686.1|3.407e-3733.59conserved hypothetical protein [Phytophthora infes... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna437rna437Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications