EWM26297.1, cds4366 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|585108303|gb|EWM26297.1| (26s proteasome non-atpase regulatory [Nannochloropsis gaditana]) HSP 1 Score: 826.624 bits (2134), Expect = 0.000e+0 Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0 Query: 1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAKAAAATEGENEGEAKGMAMETEAGASSSGTAAAAAASMGGEVDEEEEALLKQALAMSMADSGSSSSLENKGKTAASGTGSGETAGAGQGEGAPMDMEDEDAAYQLALKMSMEEEGGGAGGGIYGCDHGHGSRGRSIVGCPRSAHIRGSGVCDEPAGLVGRSRS 413 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAKAAAATEGENEGEAKGMAMETEAGASSSGTAAAAAASMGGEVDEEEEALLKQALAMSMADSGSSSSLENKGKTAASGTGSGETAGAGQGEGAPMDMEDEDAAYQLALKMSMEEEGGGAGGGIYGCDHGHGSRGRSIVGCPRSAHIRGSGVCDEPAGLVGRSRS Sbjct: 1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAKAAAATEGENEGEAKGMAMETEAGASSSGTAAAAAASMGGEVDEEEEALLKQALAMSMADSGSSSSLENKGKTAASGTGSGETAGAGQGEGAPMDMEDEDAAYQLALKMSMEEEGGGAGGGIYGCDHGHGSRGRSIVGCPRSAHIRGSGVCDEPAGLVGRSRS 413
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|695380041|ref|XP_009516696.1| (hypothetical protein PHYSODRAFT_472939 [Phytophthora sojae] >gi|348689607|gb|EGZ29421.1| hypothetical protein PHYSODRAFT_472939 [Phytophthora sojae]) HSP 1 Score: 324.709 bits (831), Expect = 2.697e-105 Identity = 159/251 (63.35%), Postives = 193/251 (76.89%), Query Frame = 0 Query: 1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAK 251 MPLE+T+IC+DNSEW RNGDYIP+R EAQHDA NL+ G KTQ NPESTVGVL MAG+ V++L SPTD++G LLS +H V++GG + +A A+QVAQLALKHRRNK G QRVVVF+ SP+E D K L K+GK LKKN IAVDVVS+GE++ N KLQ FV+A +SNSNSHLV++PAG LPSDVLV+SP++HG + + A G GG ++GGVD DP LA+ALRVS EEERARQEAA K Sbjct: 1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHRVKIGGTMRLANAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGELDANAAKLQAFVDAASSNSNSHLVTVPAGVLPSDVLVSSPVLHGDDGAAAAAAASGGG-------GGNDAFAEYGGVDPSMDPELALALRVSMEEERARQEAAQK 244
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|675209209|ref|XP_008913489.1| (hypothetical protein PPTG_17585 [Phytophthora parasitica INRA-310] >gi|566011905|gb|ETI34816.1| hypothetical protein F443_18754 [Phytophthora parasitica P1569] >gi|568037395|gb|ETM34980.1| hypothetical protein L914_18044 [Phytophthora parasitica] >gi|568086270|gb|ETN01162.1| hypothetical protein PPTG_17585 [Phytophthora parasitica INRA-310] >gi|570315610|gb|ETO63558.1| hypothetical protein F444_18755 [Phytophthora parasitica P1976] >gi|570969684|gb|ETP32803.1| hypothetical protein F442_18570 [Phytophthora parasitica P10297] >gi|970640614|gb|KUF83074.1| 26S proteasome non-ATPase regulatory subunit 4 [Phytophthora nicotianae]) HSP 1 Score: 322.783 bits (826), Expect = 1.436e-104 Identity = 156/251 (62.15%), Postives = 193/251 (76.89%), Query Frame = 0 Query: 1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAK 251 MPLE+T+IC+DNSEW RNGDYIP+R EAQHDA NL+ G KTQ NPESTVGVL MAG+ V++L SPTD++G LLS +H +++GG + +A A+QVAQLALKHRRNK G QRVVVF+ SP+E D K L K+GK LKKN IAVDVVS+G+++ N KLQ FV+A +SN+NSHLV++PAG LPSDVLV+SP++HG + + A G G G ++GGVD DP LA+ALRVS EEERARQEAA K Sbjct: 1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHRIKIGGSMKLANAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGDLDANAAKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLHGDDGAAAAASSGGGGGN--------DAFAEYGGVDPSMDPELALALRVSMEEERARQEAAQK 243
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|1214704892|gb|OWZ16676.1| (26S proteasome non-ATPase regulatory protein [Phytophthora megakarya]) HSP 1 Score: 321.627 bits (823), Expect = 2.442e-104 Identity = 155/251 (61.75%), Postives = 192/251 (76.49%), Query Frame = 0 Query: 1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAK 251 MPLE+T+IC+DNSEW RNGDYIP+R EAQHDA NL+ G KTQ NPESTVGVL MAG+ +++L SPTD++G LLS +H V++GG + +A A+QVAQLALKHRRNK G QRVVVF+ SP+E D K L K+GK LKKN IAVDVVS+GE++ N +LQ FV+A +SN NSHLV++PAG LPSDVLV+SP++HG ++ + A G G ++GGVD DP LA+ALRVS EEERARQEAA K Sbjct: 1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSIQVLASPTDNMGTLLSAIHRVKIGGSMRLANAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGELDANAARLQAFVDAASSNGNSHLVTVPAGVLPSDVLVSSPVLHGDDDAAAAAASSGGGGN--------DAFAEYGGVDPSMDPELALALRVSMEEERARQEAAQK 243
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|567978027|gb|ETL28521.1| (hypothetical protein L916_18144 [Phytophthora parasitica] >gi|570939398|gb|ETP04655.1| hypothetical protein F441_18617 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 320.857 bits (821), Expect = 7.007e-104 Identity = 155/251 (61.75%), Postives = 192/251 (76.49%), Query Frame = 0 Query: 1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAK 251 MPLE+T+IC+DNSEW RNGDYIP+R EAQHDA NL+ G KTQ NPESTVGVL MA + V++L SPTD++G LLS +H +++GG + +A A+QVAQLALKHRRNK G QRVVVF+ SP+E D K L K+GK LKKN IAVDVVS+G+++ N KLQ FV+A +SN+NSHLV++PAG LPSDVLV+SP++HG + + A G G G ++GGVD DP LA+ALRVS EEERARQEAA K Sbjct: 1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLVMADKSVQVLASPTDNMGTLLSAIHRIKIGGSMKLANAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGDLDANAAKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLHGDDGAAAAASSGGGGGN--------DAFAEYGGVDPSMDPELALALRVSMEEERARQEAAQK 243
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|567949369|gb|ETK75101.1| (hypothetical protein L915_18238 [Phytophthora parasitica] >gi|568007540|gb|ETL81777.1| hypothetical protein L917_17958 [Phytophthora parasitica]) HSP 1 Score: 320.472 bits (820), Expect = 9.292e-104 Identity = 155/251 (61.75%), Postives = 192/251 (76.49%), Query Frame = 0 Query: 1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAK 251 MPLE+T+IC+DNSEW RNGDYIP+R EAQHDA NL+ G KTQ NPESTVGVL MA + V++L SPTD++G LLS +H +++GG + +A A+QVAQLALKHRRNK G QRVVVF+ SP+E D K L K+GK LKKN IAVDVVS+G+++ N KLQ FV+A +SN+NSHLV++PAG LPSDVLV+SP++HG + + A G G G ++GGVD DP LA+ALRVS EEERARQEAA K Sbjct: 1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMADKSVQVLASPTDNMGTLLSAIHRIKIGGSMKLANAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGDLDANAAKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLHGDDGAAAAASSGGGGGN--------DAFAEYGGVDPSMDPELALALRVSMEEERARQEAAQK 243
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|301105222|ref|XP_002901695.1| (26S proteasome non-ATPase regulatory subunit, putative [Phytophthora infestans T30-4] >gi|262100699|gb|EEY58751.1| 26S proteasome non-ATPase regulatory subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 318.546 bits (815), Expect = 5.883e-103 Identity = 152/246 (61.79%), Postives = 188/246 (76.42%), Query Frame = 0 Query: 1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQ 246 MPLE+T+IC+DNSEW RNGDYIP+R EAQHDA NL+ G KTQ NPESTVGVL MAG+ V++L SPTD++G LLS +H V++GG + +A A+QVAQLALKHRRNK G QRVVVF+ SP+E D K L K+GK LKKN IAVDVVS+G+++ N KLQ FV+A +SN+NSHLV++PAG LPSDVLV+SP++HG + + A G G ++GGVD DP LA+ALRVS EEERARQ Sbjct: 1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHRVKIGGSMKLANAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGDLDANATKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLHGDDGAAAAAASSGGGGN--------DAFAEYGGVDPSMDPELALALRVSMEEERARQ 238
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|299115289|emb|CBN75566.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 318.931 bits (816), Expect = 7.002e-102 Identity = 161/245 (65.71%), Postives = 190/245 (77.55%), Query Frame = 0 Query: 7 IICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAK 251 +IC+DNSEW RNGDYIPTR EAQHDA NL+ G+KT NPESTVGVLTMAG+G ELLVSPTDD+GK+LS LH V + G+ + A +Q+AQLALKHRRNK+G QR+++FV SP+E + KTLVKVGK LKKN +A DVVS+GE ++NQEKL+EF+ A NS N HLV+IPAG LPSDVL++SPI+ G G G G G G G G G DFGGVD DP LAMALRVS EEERARQEAA+K Sbjct: 1 MICLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIV-SEGGGGGGGGGGGGGGLAAGGGGEFGGAADFGGVDPSMDPELAMALRVSMEEERARQEAASK 244
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|953486132|emb|CEG50310.1| (multiubiquitin chain binding protein mbp1 [Plasmopara halstedii]) HSP 1 Score: 306.22 bits (783), Expect = 1.928e-98 Identity = 149/258 (57.75%), Postives = 190/258 (73.64%), Query Frame = 0 Query: 1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQEAAAKAAAATEG 258 MPLE+T+IC+DNSEW RNGDYIP+R EAQHDA NL+ G KTQ NPESTVGVL MAG+ V++L SPTD++G LLS +H V++GG + ++ A+QVAQLALKHRRNK G QRVVVF+ SP+E D K L K+GK LKKN IAVDVVS+G+++ N KLQ FV+A +SN+NSHLV++PAG LPSDVLV+SP++HG + G+ A G G+ ++GGVD DP LA+ALRVS EEE + + T+ Sbjct: 1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHGVKIGGSMKLSNAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGDMDTNASKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLHGDDGGAAAASSSGGG--------GSDAFAEYGGVDPSMDPELALALRVSMEEELPSPALTSNSTPGTDN 250
BLAST of EWM26297.1 vs. NCBI_GenBank
Match: gi|302838560|ref|XP_002950838.1| (26S proteasome regulatory complex [Volvox carteri f. nagariensis] >gi|300263955|gb|EFJ48153.1| 26S proteasome regulatory complex [Volvox carteri f. nagariensis]) HSP 1 Score: 301.212 bits (770), Expect = 4.563e-96 Identity = 185/381 (48.56%), Postives = 246/381 (64.57%), Query Frame = 0 Query: 3 LETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMGAGAGGGGAGFGGTSGLGDFGGVDAQSDPALAMALRVSYEEERARQE-------AAAKAAAATEGENEGEAKGMAMETEAGA-----SSSGTAAAAAA------SMGGEVDEEEEALLKQALAMSMADSGSSSSLENKGKTAASGTGSGETAGAGQGEGAPMDMEDEDAAYQLALKMSMEEEG 365 +E T++C+DNSE++R+GDY PTRF+AQ DAVNL+ GAKTQ +PE+TVGVLTM+G+ +LV+PT D+GK+L+C+ ++ + G +++ +VQ+AQLALKHR+NKN QR+V+FVCSPV D + LVK+ K+LKKN +AVDVVS G EENQEKL+ F+ A NSN NSHLV++P G + SDVL++SPI G G G G G G GG G GG + +F GVD DP LA+ALRVS EEER RQ AAA A+ A E A EAG ++ GT A A A + GG++D +E+ALL+QALAMSM AA+ G+ +D+ DEDA QLAL++SM++ G Sbjct: 1 MECTVVCIDNSEFSRDGDYAPTRFQAQADAVNLLAGAKTQAHPEATVGVLTMSGKTPRVLVTPTPDLGKVLNCMTNIDIDGECNVSSSVQIAQLALKHRQNKNQRQRIVIFVCSPVTEDKEKLVKIAKKLKKNNVAVDVVSFGAEEENQEKLEAFMAAVNSNGNSHLVTVPPGPVLSDVLISSPIFQGEGGGGYGFAGGVGGGAGGGGAGGGADGFEF-GVDPNMDPELALALRVSLEEERDRQNRAAAAAAAAAGASQAAPAEGAAAAGTSGPAVEAGLAAGSDAAVGTPAPAVAPGVGVTAAGGDMDLDEDALLQQALAMSM--------------EAAAAPPPGD-----------VDVMDEDAELQLALQLSMQDAG 355 The following BLAST results are available for this feature:
BLAST of EWM26297.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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