EWM26320.1, cds4354 (CDS) Nannochloropsis gaditana

Overview
NameEWM26320.1
Unique Namecds4354
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:388936..390336 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26320.1
ProductWD40 repeat containing protein
Orig transcript idgnl|cribi|Naga_100078g4.6995.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:388936..390336 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|585108327|gb|EWM26320.1| (WD40 repeat containing protein [Nannochloropsis gaditana])

HSP 1 Score: 964.526 bits (2492), Expect = 0.000e+0
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0
Query:    1 MSSPSLSCSRKIPSCTGVGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQTCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCLTRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEKTGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIFRF 466
            MSSPSLSCSRKIPSCTGVGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQTCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCLTRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEKTGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIFRF
Sbjct:    1 MSSPSLSCSRKIPSCTGVGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQTCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCLTRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEKTGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIFRF 466          
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|1214706056|gb|OWZ17658.1| (hypothetical protein PHMEG_0008369 [Phytophthora megakarya])

HSP 1 Score: 211.075 bits (536), Expect = 2.586e-59
Identity = 142/451 (31.49%), Postives = 226/451 (50.11%), Query Frame = 0
Query:   30 RITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ---TCKP------TRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
             +T+LK+   ++M  E         T  +  S+ +GP    G +   S +PL+C+S+S DE E+VVGS+DHALY   +    + +P      +R LY+K  GH +W+TCV H+ + +++SG  D K+C+W  + +                          C+D+ GH+ SVS +L + + D+  S  YD +++LWN+  +      A  R  + N  F K   A            P+LD +  +  +Q + G R G  +V DL T K +     AHRG  T +    +  S     +GGQDG VKVWD+R+     T ++  H++P  G + AV  L +      +L TGGAD  + +LD R+++  +H F  H   IY++       + + FSGAG+G +H  +  +  +LYGL      VRA+AT T+      LVAAG+DG V+++
Sbjct:   67 EVTSLKSSAGKVMRIEAKQTPSTRPTDDLSGSWIQGPRVPGGSVHAVSAQPLICMSMSADESEVVVGSSDHALYVLPVDSGSSSRPSRVGSRSRTLYTKKFGHTEWITCVTHLPDRRIVSGAMDSKLCLWDATGIK-------------------------CEDMLGHSGSVSCVLVIND-DLVLSAGYDKMVRLWNVGRR------ASSREREVN--FIKASTA------------PILDVSLLSGGQQAVCGDRDGGVQVIDLQTNKVLRKYANAHRGHTTSVLGSQSEESTDSCYSGGQDGAVKVWDSRQ--KGATFSLEIHIDPRSGKAGAVGFLREPTDDSNVLITGGADGVINVLDKRQSYGVVHSFTEHMDFIYSMH----VRNQLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIATPTNY-----LVAAGDDGSVIMY 460          
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|570999029|gb|ETP55121.1| (hypothetical protein F442_00287 [Phytophthora parasitica P10297])

HSP 1 Score: 207.223 bits (526), Expect = 1.664e-57
Identity = 146/470 (31.06%), Postives = 234/470 (49.79%), Query Frame = 0
Query:   18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIFRF 466
            +G     PS  G++T +  ++    P  TL  +    TG    ++ +GP +  GE+   S +PL+C+S+S DE E+VVGS+DHALY   +               T +P R LY+K  GH +WVTCV H+ + +++SGG D K+C+W  + +                          C+DL GH+ SVS +L + + DM  S  YD +++LWN++ + +        S++   S  K   A            P+LD +  +E ++ + G R G  ++ DL T+K +     AH+G  T +    +  S     +GGQDGVVKVWD+R+     T ++  H++P      AV  L +      +L T GAD  + +LD R+++  +H F  H   IY+L         + FSGAG+G +H  +  +  +LYGL      VRA+A +T+     +LVAAG+DG V+++  
Sbjct:   94 IGEASLKPSSDGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVYNM 494          
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|675161939|ref|XP_008889854.1| (hypothetical protein PPTG_00230 [Phytophthora parasitica INRA-310] >gi|567972154|gb|ETK97144.1| hypothetical protein L915_00265 [Phytophthora parasitica] >gi|568109082|gb|ETN23689.1| hypothetical protein PPTG_00230 [Phytophthora parasitica INRA-310] >gi|570962187|gb|ETP27166.1| hypothetical protein F441_00281 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 206.453 bits (524), Expect = 2.400e-57
Identity = 146/468 (31.20%), Postives = 234/468 (50.00%), Query Frame = 0
Query:   18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
            +G     PS  G++T +  ++    P  TL  +    TG    ++ +GP +  GE+   S +PL+C+S+S DE E+VVGS+DHALY   +               T +P R LY+K  GH +WVTCV H+ + +++SGG D K+C+W  + +                          C+DL GH+ SVS +L + + DM  S  YD +++LWN++ + +        S++   S  K   A            P+LD +  +E ++ + G R G  ++ DL T+K +     AH+G  T +    +  S     +GGQDGVVKVWD+R+     T ++  H++P      AV  L +      +L T GAD  + +LD R+++  +H F  H   IY+L         + FSGAG+G +H  +  +  +LYGL      VRA+A +T+     +LVAAG+DG V+++
Sbjct:   94 IGEASLKPSSDGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492          
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|970655556|gb|KUF93700.1| (F-box/WD repeat-containing protein 7 [Phytophthora nicotianae])

HSP 1 Score: 205.682 bits (522), Expect = 5.779e-57
Identity = 145/468 (30.98%), Postives = 234/468 (50.00%), Query Frame = 0
Query:   18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
            +G     PS  G++T +  ++    P  TL  +    TG    ++ +GP +  GE+   S +PL+C+S+S DE E+VVGS+DHALY   +               T +P R LY+K  GH +WVTCV H+ + +++SGG D K+C+W  + +                          C+DL GH+ SVS +L + + DM  S  YD ++++WN++ + +        S++   S  K   A            P+LD +  +E ++ + G R G  ++ DL T+K +     AH+G  T +    +  S     +GGQDGVVKVWD+R+     T ++  H++P      AV  L +      +L T GAD  + +LD R+++  +H F  H   IY+L         + FSGAG+G +H  +  +  +LYGL      VRA+A +T+     +LVAAG+DG V+++
Sbjct:   94 IGEASLKPSSDGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRIWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492          
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|570338182|gb|ETO86130.1| (hypothetical protein F444_00285 [Phytophthora parasitica P1976])

HSP 1 Score: 205.297 bits (521), Expect = 7.427e-57
Identity = 145/468 (30.98%), Postives = 233/468 (49.79%), Query Frame = 0
Query:   18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
            +G     PS  G++T +  ++    P  TL  +    TG    ++ +GP +  GE+   S +PL+C+S+S DE E+VVGS+DHALY   +               T +P R LY+K  GH +WVTCV H+ + +++SGG D K+C+W  + +                          C+DL GH+ SVS +L + + DM  S  YD +++LWN++ + +        S++   S  K   A            P+LD +  +E ++ + G R G  ++ DL T+K +     AH+G  T +    +  S     +GGQDG VKVWD+R+     T ++  H++P      AV  L +      +L T GAD  + +LD R+++  +H F  H   IY+L         + FSGAG+G +H  +  +  +LYGL      VRA+A +T+     +LVAAG+DG V+++
Sbjct:   94 IGEASLKPSSNGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGAVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492          
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|568000482|gb|ETL50497.1| (hypothetical protein L916_00263 [Phytophthora parasitica] >gi|568029615|gb|ETM03536.1| hypothetical protein L917_00247 [Phytophthora parasitica])

HSP 1 Score: 204.912 bits (520), Expect = 1.214e-56
Identity = 136/425 (32.00%), Postives = 217/425 (51.06%), Query Frame = 0
Query:   61 SFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
            ++ +GP +  GE+   S +PL+C+S+S DE E+VVGS+DHALY   +               T +P R LY+K  GH +WVTCV H+ + +++SGG D K+C+W  + +                          C+DL GH+ SVS +L + + DM  S  YD +++LWN++ + +        S++   S  K   A            P+LD +  +E ++ + G R G  ++ DL T+K +     AH+G  T +    +  S     +GGQDGVVKVWD+R+     T ++  H++P      AV  L +      +L T GAD  + +LD R+++  +H F  H   IY+L         + FSGAG+G +H  +  +  +LYGL      VRA+A +T+     +LVAAG+DG V+++
Sbjct:  126 AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492          
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|568060284|gb|ETM56823.1| (hypothetical protein L914_00270, partial [Phytophthora parasitica])

HSP 1 Score: 204.912 bits (520), Expect = 1.297e-56
Identity = 136/425 (32.00%), Postives = 217/425 (51.06%), Query Frame = 0
Query:   61 SFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
            ++ +GP +  GE+   S +PL+C+S+S DE E+VVGS+DHALY   +               T +P R LY+K  GH +WVTCV H+ + +++SGG D K+C+W  + +                          C+DL GH+ SVS +L + + DM  S  YD +++LWN++ + +        S++   S  K   A            P+LD +  +E ++ + G R G  ++ DL T+K +     AH+G  T +    +  S     +GGQDGVVKVWD+R+     T ++  H++P      AV  L +      +L T GAD  + +LD R+++  +H F  H   IY+L         + FSGAG+G +H  +  +  +LYGL      VRA+A +T+     +LVAAG+DG V+++
Sbjct:  130 AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSKKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGQLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 496          
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|566034474|gb|ETI57385.1| (hypothetical protein F443_00303 [Phytophthora parasitica P1569])

HSP 1 Score: 204.142 bits (518), Expect = 1.943e-56
Identity = 145/468 (30.98%), Postives = 232/468 (49.57%), Query Frame = 0
Query:   18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
            +G     PS  G++T +  ++    P  TL  +    TG    ++ +GP +  GE+   S +PL C+S+  DE E+VVGS+DHALY   +               T +P R LY+K  GH +WVTCV H+ + +++SGG D K+C+W  + +                          C+DL GH+ SVS +L + + DM  S  YD +++LWN++ + +        S++   S  K   A            P+LD +  +E ++ + G R G  ++ DL T+K +     AH+G  T +    +  S     +GGQDGVVKVWD+R+     T ++  H++P      AV  L +      +L T GAD  + +LD R+++  +H F  H   IY+L         + FSGAG+G +H  +  +  +LYGL      VRA+A +T+     +LVAAG+DG V+++
Sbjct:   94 IGEASLKPSSNGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLTCMSMIADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGQLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492          
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|301112523|ref|XP_002998032.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262112326|gb|EEY70378.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 199.134 bits (505), Expect = 4.748e-55
Identity = 133/431 (30.86%), Postives = 220/431 (51.04%), Query Frame = 0
Query:   55 TGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCL---EKTGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
            T  +  ++ +GP    GE+   S +PL+C+S+S DE E+V+GS+DHALY   +               T +P + LY+K  GH +WVTCV H+ + +++SGG D K+C+W  + +                          C+DL GH+ SVS +L + + +M  S  YD +++LWN++ + +        S++   S  K   A            P+LD +   E ++ + G R G  ++ DL T+K +    +AHRG  T +    +  +AS   +GGQDG V+VWD+R+     T ++  H++P      AV  L   ++   +L T GAD  + +LD R+++  ++ F  H   IY+L       S + FSGAG+G +H  +  +  +LYGL      VRA+A + +     +LVAAG+DG V+++
Sbjct:   66 TAQLTGAWVQGPCTPEGEVHAVSAQPLMCMSMSADESEVVMGSSDHALYVIPISSNSSSSGRASRGASTSRP-KTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLVGHSGSVSCVLSLND-EMVVSVGYDKMLRLWNVSRRAS--------SSQREVSGVKVSTA------------PILDVSLLYEGQRAVCGDRDGGVQLIDLQTSKILRKHASAHRGHTTSVLGSQSEETASCFFSGGQDGAVRVWDSRQ--KEATHSLELHIDPRSSKKGAVGFLCEPKEDPNVLITAGADGVINVLDKRQSYDVMYSFTEHLDFIYSLH----VRSQLCFSGAGNGMLHVHDWKTGKLLYGLGANEAAVRAIAASKN-----QLVAAGDDGGVIVY 438          
The following BLAST results are available for this feature:
BLAST of EWM26320.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108327|gb|EWM26320.1|0.000e+0100.00WD40 repeat containing protein [Nannochloropsis ga... [more]
gi|1214706056|gb|OWZ17658.1|2.586e-5931.49hypothetical protein PHMEG_0008369 [Phytophthora m... [more]
gi|570999029|gb|ETP55121.1|1.664e-5731.06hypothetical protein F442_00287 [Phytophthora para... [more]
gi|675161939|ref|XP_008889854.1|2.400e-5731.20hypothetical protein PPTG_00230 [Phytophthora para... [more]
gi|970655556|gb|KUF93700.1|5.779e-5730.98F-box/WD repeat-containing protein 7 [Phytophthora... [more]
gi|570338182|gb|ETO86130.1|7.427e-5730.98hypothetical protein F444_00285 [Phytophthora para... [more]
gi|568000482|gb|ETL50497.1|1.214e-5632.00hypothetical protein L916_00263 [Phytophthora para... [more]
gi|568060284|gb|ETM56823.1|1.297e-5632.00hypothetical protein L914_00270, partial [Phytopht... [more]
gi|566034474|gb|ETI57385.1|1.943e-5630.98hypothetical protein F443_00303 [Phytophthora para... [more]
gi|301112523|ref|XP_002998032.1|4.748e-5530.86conserved hypothetical protein [Phytophthora infes... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4364rna4364Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications