EWM26320.1, cds4354 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|585108327|gb|EWM26320.1| (WD40 repeat containing protein [Nannochloropsis gaditana]) HSP 1 Score: 964.526 bits (2492), Expect = 0.000e+0 Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0
Query: 1 MSSPSLSCSRKIPSCTGVGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQTCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCLTRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEKTGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIFRF 466
MSSPSLSCSRKIPSCTGVGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQTCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCLTRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEKTGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIFRF
Sbjct: 1 MSSPSLSCSRKIPSCTGVGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQTCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCLTRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEKTGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIFRF 466
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|1214706056|gb|OWZ17658.1| (hypothetical protein PHMEG_0008369 [Phytophthora megakarya]) HSP 1 Score: 211.075 bits (536), Expect = 2.586e-59 Identity = 142/451 (31.49%), Postives = 226/451 (50.11%), Query Frame = 0
Query: 30 RITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ---TCKP------TRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
+T+LK+ ++M E T + S+ +GP G + S +PL+C+S+S DE E+VVGS+DHALY + + +P +R LY+K GH +W+TCV H+ + +++SG D K+C+W + + C+D+ GH+ SVS +L + + D+ S YD +++LWN+ + A R + N F K A P+LD + + +Q + G R G +V DL T K + AHRG T + + S +GGQDG VKVWD+R+ T ++ H++P G + AV L + +L TGGAD + +LD R+++ +H F H IY++ + + FSGAG+G +H + + +LYGL VRA+AT T+ LVAAG+DG V+++
Sbjct: 67 EVTSLKSSAGKVMRIEAKQTPSTRPTDDLSGSWIQGPRVPGGSVHAVSAQPLICMSMSADESEVVVGSSDHALYVLPVDSGSSSRPSRVGSRSRTLYTKKFGHTEWITCVTHLPDRRIVSGAMDSKLCLWDATGIK-------------------------CEDMLGHSGSVSCVLVIND-DLVLSAGYDKMVRLWNVGRR------ASSREREVN--FIKASTA------------PILDVSLLSGGQQAVCGDRDGGVQVIDLQTNKVLRKYANAHRGHTTSVLGSQSEESTDSCYSGGQDGAVKVWDSRQ--KGATFSLEIHIDPRSGKAGAVGFLREPTDDSNVLITGGADGVINVLDKRQSYGVVHSFTEHMDFIYSMH----VRNQLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIATPTNY-----LVAAGDDGSVIMY 460
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|570999029|gb|ETP55121.1| (hypothetical protein F442_00287 [Phytophthora parasitica P10297]) HSP 1 Score: 207.223 bits (526), Expect = 1.664e-57 Identity = 146/470 (31.06%), Postives = 234/470 (49.79%), Query Frame = 0
Query: 18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIFRF 466
+G PS G++T + ++ P TL + TG ++ +GP + GE+ S +PL+C+S+S DE E+VVGS+DHALY + T +P R LY+K GH +WVTCV H+ + +++SGG D K+C+W + + C+DL GH+ SVS +L + + DM S YD +++LWN++ + + S++ S K A P+LD + +E ++ + G R G ++ DL T+K + AH+G T + + S +GGQDGVVKVWD+R+ T ++ H++P AV L + +L T GAD + +LD R+++ +H F H IY+L + FSGAG+G +H + + +LYGL VRA+A +T+ +LVAAG+DG V+++
Sbjct: 94 IGEASLKPSSDGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVYNM 494
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|675161939|ref|XP_008889854.1| (hypothetical protein PPTG_00230 [Phytophthora parasitica INRA-310] >gi|567972154|gb|ETK97144.1| hypothetical protein L915_00265 [Phytophthora parasitica] >gi|568109082|gb|ETN23689.1| hypothetical protein PPTG_00230 [Phytophthora parasitica INRA-310] >gi|570962187|gb|ETP27166.1| hypothetical protein F441_00281 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 206.453 bits (524), Expect = 2.400e-57 Identity = 146/468 (31.20%), Postives = 234/468 (50.00%), Query Frame = 0
Query: 18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
+G PS G++T + ++ P TL + TG ++ +GP + GE+ S +PL+C+S+S DE E+VVGS+DHALY + T +P R LY+K GH +WVTCV H+ + +++SGG D K+C+W + + C+DL GH+ SVS +L + + DM S YD +++LWN++ + + S++ S K A P+LD + +E ++ + G R G ++ DL T+K + AH+G T + + S +GGQDGVVKVWD+R+ T ++ H++P AV L + +L T GAD + +LD R+++ +H F H IY+L + FSGAG+G +H + + +LYGL VRA+A +T+ +LVAAG+DG V+++
Sbjct: 94 IGEASLKPSSDGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|970655556|gb|KUF93700.1| (F-box/WD repeat-containing protein 7 [Phytophthora nicotianae]) HSP 1 Score: 205.682 bits (522), Expect = 5.779e-57 Identity = 145/468 (30.98%), Postives = 234/468 (50.00%), Query Frame = 0
Query: 18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
+G PS G++T + ++ P TL + TG ++ +GP + GE+ S +PL+C+S+S DE E+VVGS+DHALY + T +P R LY+K GH +WVTCV H+ + +++SGG D K+C+W + + C+DL GH+ SVS +L + + DM S YD ++++WN++ + + S++ S K A P+LD + +E ++ + G R G ++ DL T+K + AH+G T + + S +GGQDGVVKVWD+R+ T ++ H++P AV L + +L T GAD + +LD R+++ +H F H IY+L + FSGAG+G +H + + +LYGL VRA+A +T+ +LVAAG+DG V+++
Sbjct: 94 IGEASLKPSSDGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRIWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|570338182|gb|ETO86130.1| (hypothetical protein F444_00285 [Phytophthora parasitica P1976]) HSP 1 Score: 205.297 bits (521), Expect = 7.427e-57 Identity = 145/468 (30.98%), Postives = 233/468 (49.79%), Query Frame = 0
Query: 18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
+G PS G++T + ++ P TL + TG ++ +GP + GE+ S +PL+C+S+S DE E+VVGS+DHALY + T +P R LY+K GH +WVTCV H+ + +++SGG D K+C+W + + C+DL GH+ SVS +L + + DM S YD +++LWN++ + + S++ S K A P+LD + +E ++ + G R G ++ DL T+K + AH+G T + + S +GGQDG VKVWD+R+ T ++ H++P AV L + +L T GAD + +LD R+++ +H F H IY+L + FSGAG+G +H + + +LYGL VRA+A +T+ +LVAAG+DG V+++
Sbjct: 94 IGEASLKPSSNGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGAVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|568000482|gb|ETL50497.1| (hypothetical protein L916_00263 [Phytophthora parasitica] >gi|568029615|gb|ETM03536.1| hypothetical protein L917_00247 [Phytophthora parasitica]) HSP 1 Score: 204.912 bits (520), Expect = 1.214e-56 Identity = 136/425 (32.00%), Postives = 217/425 (51.06%), Query Frame = 0
Query: 61 SFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
++ +GP + GE+ S +PL+C+S+S DE E+VVGS+DHALY + T +P R LY+K GH +WVTCV H+ + +++SGG D K+C+W + + C+DL GH+ SVS +L + + DM S YD +++LWN++ + + S++ S K A P+LD + +E ++ + G R G ++ DL T+K + AH+G T + + S +GGQDGVVKVWD+R+ T ++ H++P AV L + +L T GAD + +LD R+++ +H F H IY+L + FSGAG+G +H + + +LYGL VRA+A +T+ +LVAAG+DG V+++
Sbjct: 126 AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGLLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|568060284|gb|ETM56823.1| (hypothetical protein L914_00270, partial [Phytophthora parasitica]) HSP 1 Score: 204.912 bits (520), Expect = 1.297e-56 Identity = 136/425 (32.00%), Postives = 217/425 (51.06%), Query Frame = 0
Query: 61 SFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
++ +GP + GE+ S +PL+C+S+S DE E+VVGS+DHALY + T +P R LY+K GH +WVTCV H+ + +++SGG D K+C+W + + C+DL GH+ SVS +L + + DM S YD +++LWN++ + + S++ S K A P+LD + +E ++ + G R G ++ DL T+K + AH+G T + + S +GGQDGVVKVWD+R+ T ++ H++P AV L + +L T GAD + +LD R+++ +H F H IY+L + FSGAG+G +H + + +LYGL VRA+A +T+ +LVAAG+DG V+++
Sbjct: 130 AWIQGPCSPEGEVHAVSAQPLMCMSMSADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSKKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGQLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 496
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|566034474|gb|ETI57385.1| (hypothetical protein F443_00303 [Phytophthora parasitica P1569]) HSP 1 Score: 204.142 bits (518), Expect = 1.943e-56 Identity = 145/468 (30.98%), Postives = 232/468 (49.57%), Query Frame = 0
Query: 18 VGTHPTLPSIRGRITALKTRQPRIMPPETLFPMGYHHTGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCLEK---TGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
+G PS G++T + ++ P TL + TG ++ +GP + GE+ S +PL C+S+ DE E+VVGS+DHALY + T +P R LY+K GH +WVTCV H+ + +++SGG D K+C+W + + C+DL GH+ SVS +L + + DM S YD +++LWN++ + + S++ S K A P+LD + +E ++ + G R G ++ DL T+K + AH+G T + + S +GGQDGVVKVWD+R+ T ++ H++P AV L + +L T GAD + +LD R+++ +H F H IY+L + FSGAG+G +H + + +LYGL VRA+A +T+ +LVAAG+DG V+++
Sbjct: 94 IGEASLKPSSNGKMTHISAKKT---PSATLEQL----TG----AWIQGPCSPEGEVHAVSAQPLTCMSMIADESEVVVGSSDHALYVIPISNSSSSSGRSSRGASTSRP-RTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLLGHSGSVSCVLNLND-DMVVSTGYDKMLRLWNVSRRAS--------SSQREVSVVKASTA------------PILDVSLLSEGQRAVCGDRDGTVQLIDLQTSKILRKHAHAHQGHTTSVLGSQSEESTGCFFSGGQDGVVKVWDSRQ--KEATHSLELHIDPRSNKKGAVGFLREPVDDPNVLITAGADGVINVLDKRQSYGVMHSFTEHLDFIYSLH----VRGQLCFSGAGNGMLHVHDWKTGKLLYGLGANQAAVRAIAASTN-----QLVAAGDDGGVIVY 492
BLAST of EWM26320.1 vs. NCBI_GenBank
Match: gi|301112523|ref|XP_002998032.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262112326|gb|EEY70378.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 199.134 bits (505), Expect = 4.748e-55 Identity = 133/431 (30.86%), Postives = 220/431 (51.04%), Query Frame = 0
Query: 55 TGPMHRSFARGPLNGAGEMCDASDRPLLCLSLSKDEEELVVGSADHALYAYNLQ--------------TCKPTRKLYSKAHGHIDWVTCVVHMDNGQVLSGGGDGKICVWPPSRLSPSSFPLKHNEDGAYKRPACPNRLTHCQDLDGHASSVSKILPVPESDMAFSGSYDGLIKLWNLTSKQALTFDAEGRSTKSNWSFGKNGVASDHSLSRCGTLDPVLDFAFDTEQKQLMSGTRKGNCKVWDLHTAKQIGTVRAAHRGPVTCL----TRWSASIMVTGGQDGVVKVWDTRRGMPLVTQAVCCHVNPVQGTSSAVSCL---EKTGGLLATGGADKRVCLLDPRRNFQTLHVFDHHQAPIYTLRYAISAESPVLFSGAGDGTVHCVNLLSNAVLYGLHPTWGPVRALATTTHLQADKKLVAAGEDGKVVIF 464
T + ++ +GP GE+ S +PL+C+S+S DE E+V+GS+DHALY + T +P + LY+K GH +WVTCV H+ + +++SGG D K+C+W + + C+DL GH+ SVS +L + + +M S YD +++LWN++ + + S++ S K A P+LD + E ++ + G R G ++ DL T+K + +AHRG T + + +AS +GGQDG V+VWD+R+ T ++ H++P AV L ++ +L T GAD + +LD R+++ ++ F H IY+L S + FSGAG+G +H + + +LYGL VRA+A + + +LVAAG+DG V+++
Sbjct: 66 TAQLTGAWVQGPCTPEGEVHAVSAQPLMCMSMSADESEVVMGSSDHALYVIPISSNSSSSGRASRGASTSRP-KTLYTKKFGHTEWVTCVTHLPDRRIVSGGMDSKLCLWDATGVK-------------------------CEDLVGHSGSVSCVLSLND-EMVVSVGYDKMLRLWNVSRRAS--------SSQREVSGVKVSTA------------PILDVSLLYEGQRAVCGDRDGGVQLIDLQTSKILRKHASAHRGHTTSVLGSQSEETASCFFSGGQDGAVRVWDSRQ--KEATHSLELHIDPRSSKKGAVGFLCEPKEDPNVLITAGADGVINVLDKRQSYDVMYSFTEHLDFIYSLH----VRSQLCFSGAGNGMLHVHDWKTGKLLYGLGANEAAVRAIAASKN-----QLVAAGDDGGVIVY 438 The following BLAST results are available for this feature:
BLAST of EWM26320.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|