EWM26335.1, cds4348 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|585108342|gb|EWM26335.1| (TIP41-like protein [Nannochloropsis gaditana]) HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0 Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0
Query: 1 MPGATVAEEAVLRRNGASVEKSEDSTRIDLGGWQVCSRARPILSDQEREALTQRIAHFWSVHCTDAASMMMASHDTSNYSEVGAGCPSTTGQSTRSGIGEEGASASGDHPADLSNAGHNFIPLPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSIGPPADVCYTRLVLHGAPS 406
MPGATVAEEAVLRRNGASVEKSEDSTRIDLGGWQVCSRARPILSDQEREALTQRIAHFWSVHCTDAASMMMASHDTSNYSEVGAGCPSTTGQSTRSGIGEEGASASGDHPADLSNAGHNFIPLPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSIGPPADVCYTRLVLHGAPS
Sbjct: 1 MPGATVAEEAVLRRNGASVEKSEDSTRIDLGGWQVCSRARPILSDQEREALTQRIAHFWSVHCTDAASMMMASHDTSNYSEVGAGCPSTTGQSTRSGIGEEGASASGDHPADLSNAGHNFIPLPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSIGPPADVCYTRLVLHGAPS 406
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|553179977|ref|XP_005852798.1| (protein phosphatase 2c, partial [Nannochloropsis gaditana CCMP526] >gi|422295736|gb|EKU23035.1| protein phosphatase 2c, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 803.897 bits (2075), Expect = 0.000e+0 Identity = 388/390 (99.49%), Postives = 388/390 (99.49%), Query Frame = 0
Query: 14 RNGASVEKSEDSTRIDLGGWQVCSRARPILSDQEREALTQRIAHFWSVHCTDAASMMMASHDTSNYSEVGAGCPSTTGQSTRSGIGEEGASASGDHPADLSNAGHNFIPLPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSIGPPADVCYTRLVLHG 403
RNGASVEKSEDSTRIDLGGWQVCSRARPILSDQEREALTQRIAHFWSVH TDAASMMMASHDT NYSEVGAGCPSTTGQSTRSGIGEEGASASGDHPADLSNAGHNFIPLPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSIGPPADVCYTRLVLHG
Sbjct: 1 RNGASVEKSEDSTRIDLGGWQVCSRARPILSDQEREALTQRIAHFWSVHFTDAASMMMASHDTRNYSEVGAGCPSTTGQSTRSGIGEEGASASGDHPADLSNAGHNFIPLPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSIGPPADVCYTRLVLHG 390
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|299116112|emb|CBN74528.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 172.17 bits (435), Expect = 6.065e-47 Identity = 105/281 (37.37%), Postives = 144/281 (51.25%), Query Frame = 0
Query: 121 IPLPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEER--KERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSIGPPADVCYTRL 399
+ LPEILFG + LE RH + F L+F + AL W E + G EVI+V EA +W G +R+ YDW +GTDY G R+ G VE +L R K+ +EW + I+R +L + PIL YDDV L+ED +HDHGVV L+VK RVMP WFVLLRY+LRVDGV++++ DTR FH+ G + +E + V+F L + GLST S Y + + + ++D P + C T L
Sbjct: 58 MQLPEILFGNNALEFRHQ-------------------------ESGFILQFESRAALKKWVELFAE----GAFEVIKVREAQKWQT-RTGTPIRKQEYDWTWGTDYAGSCRRQDVG------VEYSESGDILQPLTRTGKDTETPVEWVACEPGGINRQMLLDQSSPILMYDDVVLFEDFIHDHGVVRLSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGELSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLDLSSGPLNDCTTLL 302
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|659110028|ref|XP_008455010.1| (PREDICTED: TIP41-like protein [Cucumis melo]) HSP 1 Score: 130.954 bits (328), Expect = 3.585e-31 Identity = 94/269 (34.94%), Postives = 131/269 (48.70%), Query Frame = 0
Query: 123 LPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRY---FHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSI 388
LPE++FG S L L+H T + FN AL W +K + + VP A++W + + YD+ F T Y G +++EAD E+ E S GL WE + SL +PILFYD+V LYEDEL D+G+ L VKVRVMP+ WF+LLR++LRVDGVL+R+RDTR F + I +ES +E TF LAEEG ++ ++ Y D +A+ + I
Sbjct: 98 LPEMVFGDSLLALKHE--------------------------TGVQIYFNAFDALTGW--------KKEALPPVEVPAAAKWKFRSKPSQQVILDYDYTFTTPYCGS-----------ERIEADTEKH--GREQTCEESNGLCWEDCKEKIDLVSL--SLKEPILFYDEVILYEDELADNGISLLTVKVRVMPSGWFLLLRFWLRVDGVLMRLRDTRMHCIFSNRENPIILRESCWREATFQSLAEEGYASDSAAYNDPSAICDRLQII 317
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|1098842074|ref|XP_018827762.1| (PREDICTED: TIP41-like protein [Juglans regia]) HSP 1 Score: 128.257 bits (321), Expect = 1.446e-30 Identity = 86/258 (33.33%), Postives = 129/258 (50.00%), Query Frame = 0
Query: 123 LPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMG---HEWIGKESRRKEVTFAQLAEEGLSTRTSEYRD 377
LPE++FG+S L L+H ++SG + FN+ AL W + + ++VP A++W + + YD+ F T Y G + +++ + C EE R L+WE + + SL +PILFYD+V LYEDEL D+GV L VKVR+MP+CWF+LLR++LRVDGVL+R+RDTR G + I +ES +E F L+ +G + ++ Y D
Sbjct: 57 LPEMVFGESSLVLKH------------------LKSGIK-------IHFNSFDALNGWKQEALPP--------VQVPAAAKWKFRSNSSQQVILDYDYTFTTPY---------SGSETIEIDTEKCGK----EETSRRKCSLQWEDCEEKIDVISL--ASKEPILFYDEVVLYEDELADNGVSLLTVKVRIMPSCWFLLLRFWLRVDGVLMRLRDTRMHCIFGVGANPIILRESCWREAAFEALSAKGHPSDSAAYSD 266
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|703108533|ref|XP_010099057.1| (hypothetical protein L484_011491 [Morus notabilis] >gi|587887923|gb|EXB76646.1| hypothetical protein L484_011491 [Morus notabilis]) HSP 1 Score: 128.257 bits (321), Expect = 1.814e-30 Identity = 89/262 (33.97%), Postives = 130/262 (49.62%), Query Frame = 0
Query: 123 LPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRY---FHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAV 381
PE++FG+S L L+H + SG + FN ALI W + + + VP A++W A + YD+ F T Y G + +E + ++++ E + L+WE ID + L + +PILFYD+V LYEDEL D+GV L VKVRVMP+ WF+LLRY+LRVDGVL+R+RDTR F I +E+ +E TF L+ +G ST ++ Y D + +
Sbjct: 57 FPEMIFGESCLVLKH------------------INSGTK-------IHFNAFDALIGWKQEALPP--------VEVPAAAKWKFRSKPAQQVILDYDYTFTTPYRGS-----------ETIEMNATKN--EIKDVAEVAYNLQWEDCKKQ-IDVAALTSK-EPILFYDEVVLYEDELADNGVSLLTVKVRVMPSSWFLLLRYWLRVDGVLMRLRDTRMHCVFGDNASPTILRETCWREATFQALSAKGYSTDSASYSDPSVI 270
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|743794936|ref|XP_011001446.1| (PREDICTED: TIP41-like protein isoform X1 [Populus euphratica]) HSP 1 Score: 127.872 bits (320), Expect = 1.929e-30 Identity = 90/266 (33.83%), Postives = 127/266 (47.74%), Query Frame = 0
Query: 123 LPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEG----ELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRY---FHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAV 381
LPE++FG+S LEL+H AT+ + FN AL W + + + VP A++W + + YD+ F T Y G EL + G + PC WE + ID L + +PILFYD+V LYEDEL D+GV L VKVRVMP+CWF+LL+++LRVDGVL+R+RDTR F + + +ES +E TF LA +G T ++ Y D + +
Sbjct: 57 LPEMVFGESCLELKH-------------------------ATSGTKIHFNAFDALTGWKQEALPP--------VEVPAAAQWKSRSKPFQQVILDYDYTFTTPYCGSETMELDIEKKDSGGILEASCSPC-----------------WEDCEEQ-IDVVALASK-EPILFYDEVVLYEDELADNGVSLLTVKVRVMPSCWFLLLQFWLRVDGVLMRLRDTRMHCAFSESANPIVLRESCWREATFEALAAKGYPTDSASYSDPSII 270
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|645261663|ref|XP_008236403.1| (PREDICTED: TIP41-like protein [Prunus mume]) HSP 1 Score: 127.487 bits (319), Expect = 3.002e-30 Identity = 90/262 (34.35%), Postives = 130/262 (49.62%), Query Frame = 0
Query: 123 LPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRY---FHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAV 381
+PE++FG S L L+H ++SG F + FN AL+ W +K + + VP A++W + + YD+ F T Y G + K +AD LD E + + L WE + ID L + +PILFYD+V LYEDEL D GV L VKVRVMP+CWF+LLR++LRVDG L+R+RDTR F+ + I +E +E TF L+ +G + + Y D + +
Sbjct: 57 MPEMVFGDSCLALKH------------------VKSG-------FTIHFNAFDALVGW--------KKEALPPVEVPAAAQWKFRSKPSQQIILDYDYTFTTPY---------CGSKTVKFDADK----LDGGEISKDTCNLHWEDCNEK-IDVVALASK-EPILFYDEVVLYEDELADSGVSLLTVKVRVMPSCWFLLLRFWLRVDGALMRLRDTRMHCAFNDNANPTILREICWREATFQALSAKGYPSEDAAYNDPSII 270
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|326531104|dbj|BAK04903.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 127.487 bits (319), Expect = 3.128e-30 Identity = 90/264 (34.09%), Postives = 126/264 (47.73%), Query Frame = 0
Query: 123 LPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHE-----WIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAV 381
LPE++FG+SF+ ++H A T L FN AL +W + + ++VP A++W A + YD+ F T Y G + D T LD S+ L WE D ID L + +PILFYD+V LYEDEL D G+ L +VRVMPT WF+LLR++LRVDG L+R+RDTR + G + + +E +E TFA +A EG + ++ Y D N V
Sbjct: 59 LPEMVFGESFVSIQH-------------------------AQTGVKLHFNALDALKAWKQEALPP--------VQVPAAAKWKFRSNPADQVILDYDYTFTTPY---------CGSDAVVLNQDAIQTSLD------ESSSLCWEDTD-DRIDLVALSAK-EPILFYDEVILYEDELADSGISFLTARVRVMPTGWFLLLRFWLRVDGALMRLRDTRLYCSFGSKEEAKPVVLRELCWREATFAAMAAEGYPSDSAAYADPNLV 272
BLAST of EWM26335.1 vs. NCBI_GenBank
Match: gi|1002254659|ref|XP_015631597.1| (PREDICTED: TIP41-like protein [Oryza sativa Japonica Group] >gi|14488361|gb|AAK63928.1|AC084282_9 unknown protein [Oryza sativa Japonica Group] >gi|108711205|gb|ABF99000.1| TIP41-like family protein, expressed [Oryza sativa Japonica Group] >gi|113549817|dbj|BAF13260.1| Os03g0760600 [Oryza sativa Japonica Group] >gi|215737192|dbj|BAG96121.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218193793|gb|EEC76220.1| hypothetical protein OsI_13623 [Oryza sativa Indica Group] >gi|222625840|gb|EEE59972.1| hypothetical protein OsJ_12672 [Oryza sativa Japonica Group] >gi|937911582|dbj|BAS86502.1| Os03g0760600 [Oryza sativa Japonica Group]) HSP 1 Score: 127.102 bits (318), Expect = 3.963e-30 Identity = 88/263 (33.46%), Postives = 129/263 (49.05%), Query Frame = 0
Query: 123 LPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHE----WIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAV 381
LPE++FG+SFL L+H A T L FN AL +W + + VP A++W + + YD+ F T Y G D + +P ++E + L WE ++ ID L + +PILFYD+V LYEDEL D+G+ L V+VRVMPT WF+LLR++LRVDGVL+R+RDTR + G + + +E +E TFA L+ +G + ++ Y D N +
Sbjct: 60 LPEMVFGESFLSLQH-------------------------AQTGIRLYFNALDALKAWKHEALPP--------VEVPAAAKWKFRSKPSDQVILDYDYTFTTPYNGS-----------DALVQNPDSIQTSLDEPR----NLCWEDSEDR-IDLVALSAK-EPILFYDEVILYEDELADNGISFLTVRVRVMPTGWFLLLRFWLRVDGVLMRLRDTRVYCSFGSDEAKPIVLRECCWREATFASLSAKGYPSDSAAYGDPNLI 272 The following BLAST results are available for this feature:
BLAST of EWM26335.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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