EWM26318.1, cds4347 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|585108325|gb|EWM26318.1| (hypothetical protein Naga_100078g11 [Nannochloropsis gaditana]) HSP 1 Score: 1182.93 bits (3059), Expect = 0.000e+0 Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0
Query: 1 MAGATVEVEVPREVRREWEQGHNGHRAIQSGDLVFQSRSNRLKRRVQALAVVPESYKARSWTTVDVHVQVDRAGRKGGREGGREGGREGTGQKGEEGTRGGLTLRVQVSKLGQLLVEETHAWPTWESTTRKSREDVVGDMGEVLGVYGELGMRARAVVVTGLGEAGVEGEEGSEVPFIPRRDLKALKSRVAARLAPAYEAFLEERKGRAVRALGLGEKEALLVPNPPSAPPLPPGRWENRRFAVKIDRLEYLDLLDEYLDQILAPWGEREGEGRAWVDEVVFEPKRMFLAAKKPDEGIARLLAFGRRHRVRVRLALPTVVRAWDAPPVRAWVEAFAAAQEQAGQGDGSRLCFEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL 586
MAGATVEVEVPREVRREWEQGHNGHRAIQSGDLVFQSRSNRLKRRVQALAVVPESYKARSWTTVDVHVQVDRAGRKGGREGGREGGREGTGQKGEEGTRGGLTLRVQVSKLGQLLVEETHAWPTWESTTRKSREDVVGDMGEVLGVYGELGMRARAVVVTGLGEAGVEGEEGSEVPFIPRRDLKALKSRVAARLAPAYEAFLEERKGRAVRALGLGEKEALLVPNPPSAPPLPPGRWENRRFAVKIDRLEYLDLLDEYLDQILAPWGEREGEGRAWVDEVVFEPKRMFLAAKKPDEGIARLLAFGRRHRVRVRLALPTVVRAWDAPPVRAWVEAFAAAQEQAGQGDGSRLCFEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL
Sbjct: 1 MAGATVEVEVPREVRREWEQGHNGHRAIQSGDLVFQSRSNRLKRRVQALAVVPESYKARSWTTVDVHVQVDRAGRKGGREGGREGGREGTGQKGEEGTRGGLTLRVQVSKLGQLLVEETHAWPTWESTTRKSREDVVGDMGEVLGVYGELGMRARAVVVTGLGEAGVEGEEGSEVPFIPRRDLKALKSRVAARLAPAYEAFLEERKGRAVRALGLGEKEALLVPNPPSAPPLPPGRWENRRFAVKIDRLEYLDLLDEYLDQILAPWGEREGEGRAWVDEVVFEPKRMFLAAKKPDEGIARLLAFGRRHRVRVRLALPTVVRAWDAPPVRAWVEAFAAAQEQAGQGDGSRLCFEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL 586
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|1182761352|emb|SMF68653.1| (putative protease [Pseudobacteriovorax antillogorgiicola]) HSP 1 Score: 238.81 bits (608), Expect = 2.990e-65 Identity = 180/559 (32.20%), Postives = 265/559 (47.41%), Query Frame = 0
Query: 31 GDLVFQSRSNRLKRRVQALAVVPESYKARSWTTVDVHVQVDRAGRKGGREGGREGGREGTGQKGEEGTRGGLTLRVQVSKLGQLLVEETHAWPTWESTTRKSREDVVGDMGEVLGVYGELGMRARAVVVTGLGEAGVEGEEGSEVPFIPRRDLKALKSRVAARLAPAYEAFLEERKGRAVRA--LGLGEKEALLVPNPPSAPPLPPGRWENRRFAVKIDRLEYLDLLDEY-LDQILAPWGEREGEGRAWVDEVVFEPKRMFLAAKKPDEGIARLLAFGRRHRVRVRLALPTVVRAWDAPPVRAWVEAFAAAQEQAGQGDGSRLCFEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL 586
GD +F++RSN LKR +ALA P + + +D+ + D G TLR + GQ L +WP + ED D+ L ++G+ + A V EG F+PR +K LK + + E + R+++ L + + + LPP E+ + VKIDR+EY+D L +Y LD +P E++FEPKR FL+ K P + + L + +RLA+PTV+RAWD V+ +V A+ E G+ F++GN+GA L+ G + D+ +DFTLYSLN+ A +LG + LSVEDD ++ +++WP G QA + ILYKD PLF+AEACSLTALH + CP +KVCGYRTL +EN++GE+F +AHE CKSIVY A S+ H ++ L G+ FR+DFLTR Y+++ VL++ L + + D+H AN+ R LL
Sbjct: 437 GDPIFKTRSNELKRVTEALAK-PREARLMALKEIDLDIFAD-------------------------SHDGETTLRFKAHLRGQELATHQFSWPAERPKKAATLED---DLKRSLSLFGDFNLHANLSV------------EGDLNWFLPRSQVKRLKQDLGTVIQKGIETYTR----RSIQGGRLAMSRQRS----------SLPPALDES--YTVKIDRMEYMDFLVQYKLDTGFSPA------------EIIFEPKRAFLSGK-PQDLMKELWLKAQHLGTTLRLAIPTVLRAWDEAVVKRYVSAY---WELGGRA------FDLGNVGAKSALQAWGYETS-------DMVSDFTLYSLNTAAVEELG-ALGLKRVCLSVEDDETSIMTKLQSWPEI--------------------GVQA---------EVILYKDTPLFIAEACSLTALH-HGCPTAKVCGYRTLEVENDEGEQFLIAHESCKSIVYGKQAYSISHYRERLQAAGVGCFRIDFLTRPYDQKGFTNVLNSCL-----TGSKVADSHAANYSRELL 873
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|553179975|ref|XP_005852797.1| (putative protease, partial [Nannochloropsis gaditana CCMP526] >gi|422295735|gb|EKU23034.1| putative protease, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 130.954 bits (328), Expect = 1.593e-28 Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0
Query: 1 MAGATVEVEVPREVRREWEQGHNGHRAIQSGDLVFQSRSNRLKRRVQALAVVPESYKARSWTTV 64
MAGATVEVEVPREVRREWEQGHNGHRAIQSGDLVFQSRSNRLKRRVQALAVVPESYKARSWT+
Sbjct: 526 MAGATVEVEVPREVRREWEQGHNGHRAIQSGDLVFQSRSNRLKRRVQALAVVPESYKARSWTSC 589
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|494422586|ref|WP_007221425.1| (peptidase [Candidatus Jettenia caeni] >gi|386404477|dbj|GAB62313.1| peptidase [Candidatus Jettenia caeni]) HSP 1 Score: 98.2117 bits (243), Expect = 1.192e-17 Identity = 69/235 (29.36%), Postives = 101/235 (42.98%), Query Frame = 0
Query: 352 FEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL 586
F+V NLGA GL E G+ V + D+ LY LN SA+ + LG + LS EDD NL+ + S HT ++Y+D+PLF++E C + A CPG C ++ + +ENE G+K CK+IV SL+H L G HFR+D + Y + L + +T+ + D+ NF+R LL
Sbjct: 700 FQVSNLGAIGLFE----------GKDVLLYADYPLYCLNP-LSAIKLKGLGFNRCTLSPEDDKDNLQ-------------------------------KLFSPHT----DIVIYQDIPLFISETC-IWAHKKGTCPGKNRCNFKQVIVENEYGDKLIAMDNECKTIVIHEKPFSLIHYIPKFLEAGQTHFRVDLCYKDYTPDMI-----HTLFSKIQNTSKIKDSLIGNFERGLL 882
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|1088279190|gb|OHB34251.1| (hypothetical protein A2Y09_01965 [Planctomycetes bacterium GWA2_39_15]) HSP 1 Score: 97.4413 bits (241), Expect = 1.352e-17 Identity = 71/235 (30.21%), Postives = 100/235 (42.55%), Query Frame = 0
Query: 352 FEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL 586
F+V NLGA GL E G V + D+ LY LN SA+ R LG LS EDD NL R++ D + I+Y+D PLF +E C + A CPG K CG+ + + NE G++F +E CK++V S+ H LL G R FR+D + Y + + AL + + ++ NF+RRLL
Sbjct: 491 FQVSNLGAMGLFE----------GVGVQLYADYPLYCLNP-LSAMKLRELGFCKHTLSPEDDKENL------------RMLFSADA-----------------------EVIVYQDTPLFTSETC-IWANMKKSCPGKKRCGFNKIILVNEYGDRFVAMNEECKTVVIGQKPFSITHLIPKLLETGQRDFRIDLCYKDYTPEMI-----QALFLNVQNRGKIKNSMAGNFERRLL 673
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|816981358|gb|KKO20969.1| (hypothetical protein BROFUL_00304 [Candidatus Brocadia fulgida]) HSP 1 Score: 92.4337 bits (228), Expect = 8.217e-16 Identity = 64/235 (27.23%), Postives = 98/235 (41.70%), Query Frame = 0
Query: 352 FEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL 586
F++ NLGA + E +L + D+ LY LN SA R LG LS EDD NL+ A I+Y+D PLF++E C + +CPG CG+R +++ENE G++F ++ CK++V S++HR LL G R FR+D R Y + + ++ R T + N++R L+
Sbjct: 654 FQLSNLGALDIFETKDVLWYA----------DYPLYCLNP-LSAAQLRKLGFCRYTLSPEDDKENLQTLYSA-----------------------------------DADLIIYQDTPLFISETCVWANMK-RRCPGISECGFRQVTVENEHGDRFVAINDRCKTVVIGERPFSIIHRIPKLLEAGQRDFRIDLCWRDYTPEMIEDIFSGIQNR-----TTMKYATMGNYERGLI 836
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|1176784851|gb|OQZ02728.1| (hypothetical protein B6D34_10210 [Candidatus Brocadia sp. UTAMX1]) HSP 1 Score: 91.6633 bits (226), Expect = 1.294e-15 Identity = 68/234 (29.06%), Postives = 98/234 (41.88%), Query Frame = 0
Query: 352 FEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRL 585
F++ NLGA GL E G +V D+ LY LN SA R LG LS EDD NL+A A I+Y+D PLF +E C + +CPG K CG++ ++++NE G++F +E CK++V S SL LL G R FR+D R Y + + ++ R T + + N++R L
Sbjct: 707 FQLCNLGAMGLFE----------GENVQWYADYPLYCLNP-LSAAKLRELGFCRYTLSPEDDKENLQALFSA-----------------------------------DADLIIYQDTPLFTSETCVWANMK-RRCPGMKECGFKKVTVKNEYGDQFVAINERCKTVVISERPLSLFPGIPKLLEAGQRDFRIDLCWRDYTPEMIEDIFSGIQNR-----TRMKYSSLGNYNRGL 888
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|1151035095|gb|OOP56505.1| (hypothetical protein AYP45_08865 [Candidatus Brocadia caroliniensis]) HSP 1 Score: 89.3521 bits (220), Expect = 5.992e-15 Identity = 109/437 (24.94%), Postives = 173/437 (39.59%), Query Frame = 0
Query: 162 LGEAGVE----GEEGSEVPFIPRRDLKALKSRVAARLAPAYEAFLEERKGRAVRALGLGEKEALLVPNPPSAPPLPPGRWENRRFAVKIDRLEYLDL--LDEYLDQILAPWGE--REGEGRAWVDEVVFEPKRM---FLAAKKPDEGIARLLAFGRRHRVRVRLALPTVVRAW-DAPPVRAWVEAFAAAQEQAGQGDGSRLCFEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL 586
LGE E E SE FIP L ++ L+ +Y+ K +A R+ + +K V ++ R ++KID+L YL+ L++ L P E D++ + M + + D+ I LA R ++ LP ++R + + + F Q G R F++ NLGA L + G V D+ LY LN SA R G LS EDD N+ + D+ ILY+D PLF +E C L A +CPG+K C ++ +++ENE G+KF ++ CK++V SL+H LL G R FR+D R Y + + ++ + + + + ++ NF+R LL
Sbjct: 474 LGETSFELRDFQAEISETLFIPLSMLNEIRRDFFQHLSVSYQ------KEKADRSQNI-KKWIKKVATEYCDSGKRFSEKDDIRLSLKIDKLHYLNHIPLEKIYKIYLVPTNETIENLMSHNDCDQIPLNKRGMKGSSGSCTQNDKHIIPSLA-----RDKIVFCLPAIMRDMGNGYETYEYYKNFV----QKFMAQGFRQ-FQLSNLGAMDLFK----------GADVQWYADYPLYCLNP-LSASKLRESGFCRYTLSPEDDNDNM----------LTLFSANADL-------------------------ILYQDTPLFTSETC-LWANMKRRCPGTKQCSFKQVTVENEFGDKFMAMNDRCKTVVIGERPFSLIHNIPKLLDAGQRDFRIDLCWRDYTPEMIEDIFQSFQTK-----SKVRNSIMGNFERGLL 841
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|1088353491|gb|OHB99981.1| (hypothetical protein A2Z57_10395 [Planctomycetes bacterium RIFCSPHIGHO2_12_39_6]) HSP 1 Score: 89.3521 bits (220), Expect = 6.756e-15 Identity = 90/369 (24.39%), Postives = 148/369 (40.11%), Query Frame = 0
Query: 241 RFAVKIDRLEYLD-------------------LLDEYLDQILAPWGERE--GEGRAWVDEVVFEPKRMFLAAKKPDEGIARLLAFGRRHRVRVRL--ALPTVVRAWDAPPVRAWVEAFAAAQEQAGQGDGSRLCFEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL 586
+ +VKIDRL+YL L+ + ++ + E + + R +VD + K L + L G+ +R +L +LP ++R D V + + E G F++ NLGA GL + G+ V + D+ Y LN A + R LG S LS EDD NL+ DV I+Y+D PLF +E C + A + C G K CG++ IENE G+KF ++ C ++V + S++ LL G R+FR+D + Y + + ++ + + + + ++ NF+R LL
Sbjct: 416 KLSVKIDRLQYLKYIPIERIHKVYLVIRDTAIFLENFKQTMMKYFTESDLSTKKRCFVDAQHDKDKEFSLTNCHSEHSEESDLTVGKEAVLRGKLVISLPVIMRDDDFEGVN-YDQFREIVSELISLGLRQ---FQISNLGAMGLFD----------GKDVSLYADYPFYCLNPLA-MIKLRELGLSKYTLSPEDDRDNLQTLFNE----------DADV-------------------------IIYQDTPLFTSETC-IWANMKSACLGKKRCGFKQKIIENEYGDKFIALNDDCGTVVINEKPFSIIQFIPKLLEAGQRNFRVDLCYKDYTPEMIQDIFS-----KIQNKSKVKNSMIGNFERGLL 728
BLAST of EWM26318.1 vs. NCBI_GenBank
Match: gi|1088351943|gb|OHB98773.1| (hypothetical protein A2W74_03035 [Planctomycetes bacterium RIFCSPLOWO2_12_38_17]) HSP 1 Score: 88.9669 bits (219), Expect = 8.376e-15 Identity = 90/369 (24.39%), Postives = 148/369 (40.11%), Query Frame = 0
Query: 241 RFAVKIDRLEYLD-------------------LLDEYLDQILAPWGERE--GEGRAWVDEVVFEPKRMFLAAKKPDEGIARLLAFGRRHRVRVRL--ALPTVVRAWDAPPVRAWVEAFAAAQEQAGQGDGSRLCFEVGNLGAWGLLEEHGLLPASSSGRHVDVTTDFTLYSLNSQASAVWARSLGASLIALSVEDDAANLEAHMRAWPRAMARVVGGGDVPAAGDEGVGEGRQAGSGHTHTAPQFILYKDVPLFMAEACSLTALHGNQCPGSKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTNAQSLVHRQQDLLRMGIRHFRLDFLTRKYEKQHLFEVLDAALRREADDTTPLPDTHQANFDRRLL 586
+ +VKIDRL+YL L+ + ++ + E + + R +VD + K L + L G+ +R +L +LP ++R D V + + E G F++ NLGA GL + G+ V + D+ Y LN A + R LG S LS EDD NL+ DV I+Y+D PLF +E C + A + C G K CG++ IENE G+KF ++ C ++V + S++ LL G R+FR+D + Y + + ++ + + + + ++ NF+R LL
Sbjct: 555 KLSVKIDRLQYLKYIPIERIHKVYLVIRDTAIFLENFKQTMMKYFTESDLSTKKRCFVDAQHDKDKEFSLTNCHSEHSEESDLTVGKEAVLRGKLVISLPVIMRDDDFEGVN-YDQFREIVSELISLGLRQ---FQISNLGAMGLFD----------GKDVSLYADYPFYCLNPLA-MIKLRELGLSKYTLSPEDDRDNLQTLFNE----------DADV-------------------------IIYQDTPLFTSETC-IWANMKSACLGKKRCGFKQKIIENEYGDKFIALNDDCGTVVINEKPFSIIQFIPKLLEAGQRNFRVDLCYKDYTPEMIQDIFS-----KIQNKSKVKNSMIGNFERGLL 867 The following BLAST results are available for this feature:
BLAST of EWM26318.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|