EWM30343.1, cds434 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30343.1 vs. NCBI_GenBank
Match: gi|585113002|gb|EWM30343.1| (hypothetical protein Naga_100003g48 [Nannochloropsis gaditana]) HSP 1 Score: 436.417 bits (1121), Expect = 7.676e-155 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query: 1 MMSRFASFFGRGAGNEGENEQTHAPAPAPAPVPHQQQPHRHHNQQQASHRQPAPPPQGKASASTGNRPRSGSSGNSGSSRHKTGKRRGTSKTGPPAGGLSPRSVSALAKLEDYAHDADALEKLLASVELCLQDYPRTPRARLLEAKDQIAQMNGNLEKLQYNGVDSIITAELESGKEKAKEKRKALNQRCDSLRERILQNSRDLAKMLTAGAGK 214
MMSRFASFFGRGAGNEGENEQTHAPAPAPAPVPHQQQPHRHHNQQQASHRQPAPPPQGKASASTGNRPRSGSSGNSGSSRHKTGKRRGTSKTGPPAGGLSPRSVSALAKLEDYAHDADALEKLLASVELCLQDYPRTPRARLLEAKDQIAQMNGNLEKLQYNGVDSIITAELESGKEKAKEKRKALNQRCDSLRERILQNSRDLAKMLTAGAGK
Sbjct: 1 MMSRFASFFGRGAGNEGENEQTHAPAPAPAPVPHQQQPHRHHNQQQASHRQPAPPPQGKASASTGNRPRSGSSGNSGSSRHKTGKRRGTSKTGPPAGGLSPRSVSALAKLEDYAHDADALEKLLASVELCLQDYPRTPRARLLEAKDQIAQMNGNLEKLQYNGVDSIITAELESGKEKAKEKRKALNQRCDSLRERILQNSRDLAKMLTAGAGK 214
BLAST of EWM30343.1 vs. NCBI_GenBank
Match: gi|813131730|ref|XP_012197713.1| (hypothetical protein SPRG_03754 [Saprolegnia parasitica CBS 223.65] >gi|641537990|gb|KDO31834.1| hypothetical protein SPRG_03754 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-14 Identity = 33/62 (53.23%), Postives = 49/62 (79.03%), Query Frame = 0
Query: 137 TPRARLLEAKDQIAQMNGNLEKLQYNGVDSIITAELESGKEKAKEKRKALNQRCDSLRERIL 198
P+ L+E+KD IAQM G+L+KLQ+NGVD IITA+L +GK +++RK LN++C+S+R +L
Sbjct: 49 VPKKELVESKDAIAQMCGSLDKLQFNGVDGIITADLVTGKADIRDQRKLLNKQCESIRTTML 110
BLAST of EWM30343.1 vs. NCBI_GenBank
Match: gi|1173945098|gb|OQR93765.1| (hypothetical protein ACHHYP_02310 [Achlya hypogyna]) HSP 1 Score: 76.6406 bits (187), Expect = 1.950e-14 Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 0
Query: 136 RTPRARLLEAKDQIAQMNGNLEKLQYNGVDSIITAELESGKEKAKEKRKALNQRCDSLRERIL 198
+ PR L EAKD +AQ+ G L+KLQ+NGVD IITA+L SGK+ +++RK LN++C+++R +L
Sbjct: 50 KVPRKELAEAKDALAQLCGTLDKLQFNGVDGIITADLVSGKDHVRDQRKQLNRQCETIRTTML 112
BLAST of EWM30343.1 vs. NCBI_GenBank
Match: gi|669151636|ref|XP_008611380.1| (hypothetical protein SDRG_07330 [Saprolegnia diclina VS20] >gi|530736854|gb|EQC35096.1| hypothetical protein SDRG_07330 [Saprolegnia diclina VS20]) HSP 1 Score: 75.485 bits (184), Expect = 4.766e-14 Identity = 31/62 (50.00%), Postives = 51/62 (82.26%), Query Frame = 0
Query: 137 TPRARLLEAKDQIAQMNGNLEKLQYNGVDSIITAELESGKEKAKEKRKALNQRCDSLRERIL 198
P++ L+E+KD IAQM G+L+KLQ++GVD IITA+L +GK+ +++RK LN++C+++R +L
Sbjct: 49 VPKSELVESKDAIAQMCGSLDKLQFHGVDGIITADLVTGKDDIRDQRKLLNKQCEAIRSTML 110
BLAST of EWM30343.1 vs. NCBI_GenBank
Match: gi|1173946179|gb|OQR94734.1| (hypothetical protein THRCLA_22215 [Thraustotheca clavata]) HSP 1 Score: 72.4034 bits (176), Expect = 6.642e-13 Identity = 30/62 (48.39%), Postives = 50/62 (80.65%), Query Frame = 0
Query: 137 TPRARLLEAKDQIAQMNGNLEKLQYNGVDSIITAELESGKEKAKEKRKALNQRCDSLRERIL 198
+ L+E+K+ IAQ+ G+L+KLQY+GVD IITA+L++GK+ +E+RK LN++C+S+R ++
Sbjct: 50 VSKEELIESKETIAQLYGSLDKLQYHGVDGIITADLKTGKDHVREQRKELNRQCESIRTLMM 111
BLAST of EWM30343.1 vs. NCBI_GenBank
Match: gi|676383245|ref|XP_009034901.1| (hypothetical protein AURANDRAFT_62608 [Aureococcus anophagefferens] >gi|323454198|gb|EGB10068.1| hypothetical protein AURANDRAFT_62608 [Aureococcus anophagefferens]) HSP 1 Score: 65.0846 bits (157), Expect = 9.651e-9 Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query: 100 SPRSVSALAKLEDYAHDADALEKLLASVELCLQDYPRTPRARLLEAKDQIAQMNGNLEKLQYNGVDSIITAEL--ESGKEKAKEKRKALNQRCDSLRERI 197
SP+S AL KL D LE+ + VE L+ A EAK +AQ+NG L+KLQ+ G+D+++T ++ ++ K + K KRKALNQ +SLR RI
Sbjct: 695 SPKS-GALEKLLALRATFDDLERAVGEVEFGLRSG--NDAAWKAEAKADVAQINGRLDKLQFAGIDAVVTTDIKDDAKKSECKTKRKALNQDVESLRTRI 791 The following BLAST results are available for this feature:
BLAST of EWM30343.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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