EWM26348.1, cds4327 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|585108357|gb|EWM26348.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 456.447 bits (1173), Expect = 1.269e-162 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 Query: 1 MIPSANRLVCPTPLAAFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNKTGWIFLMNCP 218 MIPSANRLVCPTPLAAFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNKTGWIFLMNCP Sbjct: 1 MIPSANRLVCPTPLAAFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNKTGWIFLMNCP 218
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|1173959020|gb|OQS05301.1| (hypothetical protein THRCLA_02551 [Thraustotheca clavata]) HSP 1 Score: 93.2041 bits (230), Expect = 5.284e-19 Identity = 64/196 (32.65%), Postives = 88/196 (44.90%), Query Frame = 0 Query: 17 FSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTH-LGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNKTGW 211 S++TWNV+F P R + ++ E PD+IC QEV FL +L ++ L ++++ S P + PYG L LA++ +P F V LP+RMGR L+ LG G K+ VG VHLESLNS RA QL S+ L+ IL GDF + W Sbjct: 67 LSIVTWNVWFDPIAQAQRYQALIKEIINQSPDIICLQEVTSNFLEILH---------------SSALIQSEFISS---PGPIYPYGCLILARKTLEPEFYDVPLPSRMGRTLVYCEILGPNGNDKS-------------------AVGTVHLESLNSRDTRAAQLKVCSEQLKPYSN----AILCGDFNFDDTQEW 221
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|1173934664|gb|OQR85928.1| (hypothetical protein ACHHYP_11178 [Achlya hypogyna]) HSP 1 Score: 83.1889 bits (204), Expect = 2.499e-15 Identity = 63/203 (31.03%), Postives = 83/203 (40.89%), Query Frame = 0 Query: 11 PTPLAAFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPS--TLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNKTGW 211 PT V+TWNV+F R + + + L DV+C QEV P FL +EH+ L + T +P + PYG L LA+R +P F+ V LP+RM R L++ + G VG VHLESLNS +R EQL AL IL GDF + W Sbjct: 71 PTDPTQLRVVTWNVWFDRLAQAQRYEALFAQVLALAADVVCLQEVTPQFLAA--------------------VEHSVLLQAVYTHSPAPVYPYGCLILARRTLEPAFDHVPLPSRMDRVLIVCRV------------------------IGGAVGTVHLESLNSPIVRDEQLRVCEAALAPFTN----AILCGDFNFDDTQAW 225
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|813162723|ref|XP_012202661.1| (hypothetical protein SPRG_07919, partial [Saprolegnia parasitica CBS 223.65] >gi|641532492|gb|KDO26517.1| hypothetical protein SPRG_07919, partial [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13 Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 0 Query: 19 VLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKG----WTVGNVHLESLNSAPLRAEQL 180 ++TWN++F P E R ++ + L PDV+C QEV P L+ ++ + + ++ EH +P+ + PYG L LA+R +P F LP++MGR + + C+ +GH G +G VHLESLN+ +R QL Sbjct: 76 LVTWNMWFDPRAQEQRFDALIVDVLALNPDVVCLQEVTPQVLSAIEASALLQATY----------EH--------SPEPVCPYGCLILARRALRPKFANTPLPSKMGRSM----VTCV-----------------VQGHMGTLPDVIIGTVHLESLNAPAMREAQL 202
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|813219360|ref|XP_012211057.1| (hypothetical protein SPRG_16340 [Saprolegnia parasitica CBS 223.65] >gi|641523357|gb|KDO18236.1| hypothetical protein SPRG_16340 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 76.2554 bits (186), Expect = 6.325e-13 Identity = 53/205 (25.85%), Postives = 87/205 (42.44%), Query Frame = 0 Query: 11 PTPLAAFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKG----WTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNKTGW 211 P+ ++TWN++F R ++ + L PDV+C QEV P L+ ++ + + ++ EH+ P+ ++PYG L LA+R +P F LP++MGR ++ C+ +GH G +G VHLESLN+ +R QL + +L GDF + W Sbjct: 36 PSDPTRLRLVTWNMWFDDRAQAQRFDALIVDVLALNPDVVCLQEVTPQVLSAIEASALLQSTY----------EHS--------PEPVSPYGCLILARRALRPKFANTPLPSKMGRSMVT----CV-----------------VQGHMGTLPDVIIGTVHLESLNAPAMREAQLRACAAVFLPHAN----AVLCGDFNFDDTQAW 197
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|831785315|ref|XP_012757750.1| (hypothetical protein SAMD00019534_017050 [Acytostelium subglobosum LB1] >gi|735858382|dbj|GAM18530.1| hypothetical protein SAMD00019534_017050 [Acytostelium subglobosum LB1]) HSP 1 Score: 76.2554 bits (186), Expect = 7.650e-13 Identity = 60/199 (30.15%), Postives = 87/199 (43.72%), Query Frame = 0 Query: 19 VLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKR----VHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNS-APLRAEQLTT---ISQALREAEQRGRRVILGGDFKLSNKT 209 ++T+NV+F + W R + + PDV+C QEV P FL L+ + W++ + + + D + PYGV+ L++R H F LPTR R+ LLT L + G M +V VHLESLNS + +R +QL T I+Q R+A Q L GD T Sbjct: 57 IVTFNVWFDSYLWRQRATELFGIVEQRMPDVVCLQEVTPMFLDYLK--------------EQRWVKEHYLMSDCGHSDTVFPYGVVILSRRDNVKFHLHSFTIYPLPTRQNRK-LLTALFQLDSGALM------------------SVSTVHLESLNSNSDMRIKQLQTIERITQERRQANQLECDSFLVGDLNFGAST 222
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|551607273|ref|XP_005784956.1| (hypothetical protein EMIHUDRAFT_230880 [Emiliania huxleyi CCMP1516] >gi|485638072|gb|EOD32527.1| hypothetical protein EMIHUDRAFT_230880 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 73.9442 bits (180), Expect = 6.603e-12 Identity = 60/199 (30.15%), Postives = 82/199 (41.21%), Query Frame = 0 Query: 11 PTPLAAFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLP-TRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNK 208 P A+ V+TWNV+F P + + RM + EA PDVIC QEVVP ++ S R +++ S +D + YG L LA+ P F V +RMGR LL+ L + + V HLESLN+A LRA+QL L + L GDF + Sbjct: 77 PPAGASLRVVTWNVWFGPVEAQARMAALFSEALGTTPDVICLQEVVPDLAASIRGCSALRRAYAISAND------------------VGSYGCLILARHELSPRFTEVPYQCSRMGRSLLVAELSPPADPAPPAACRVA-------------VATTHLESLNNARLRAKQLRIARDTLASYDS----AALVGDFNFDSS 240
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|551610685|ref|XP_005786449.1| (hypothetical protein EMIHUDRAFT_111400 [Emiliania huxleyi CCMP1516] >gi|485639738|gb|EOD34020.1| hypothetical protein EMIHUDRAFT_111400 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 73.559 bits (179), Expect = 8.834e-12 Identity = 59/198 (29.80%), Postives = 82/198 (41.41%), Query Frame = 0 Query: 15 AAFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLP-TRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNKTGW 211 A+ V+TWNV+F P + + RM + EA PDVIC QEVVP ++ S R +++ S +D + YG L LA+ P F V +RMGR LL+ L + + V HLESLN+A LRA+QL L + L GDF + + Sbjct: 80 ASLRVVTWNVWFGPVEAQARMAALFSEALGTTPDVICLQEVVPDLAASIRGCSALRRAYAISAND------------------VGSYGCLILARHELSPRFTEVPYQCSRMGRSLLVAELSPPADPAPPAACRVA-------------VATTHLESLNNARLRAKQLRIARDTLASYDS----AALVGDFNFDSSQNF 242
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|669155890|ref|XP_008613507.1| (hypothetical protein SDRG_09359 [Saprolegnia diclina VS20] >gi|530734579|gb|EQC32821.1| hypothetical protein SDRG_09359 [Saprolegnia diclina VS20]) HSP 1 Score: 73.1738 bits (178), Expect = 1.117e-11 Identity = 58/201 (28.86%), Postives = 86/201 (42.79%), Query Frame = 0 Query: 11 PTPLAAFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNKTGW 211 P+ V+TWN++F R ++ + L PDV+C QEV P L+ ++ + + ++ S P+ + PYG L LA+R P F T LP++MGR ++ C+ EG G VG VHLESLN+ +RA QL + AL +L GDF + W Sbjct: 68 PSDPTRLRVVTWNMWFDHRDQALRFDALIMQVLALNPDVVCLQEVTPQVLSAIEASALLQATYDHS------------------PEPVYPYGCLVLARRTLHPAFATTPLPSKMGRSMVT----CVVEGH--------------MGALPGVVGTVHLESLNAPAVRAAQLRACAAALAPHAN----AVLCGDFNFDDTQAW 228
BLAST of EWM26348.1 vs. NCBI_GenBank
Match: gi|470526521|ref|XP_004356772.1| (endonuclease/exonuclease/phosphatase family protein [Acanthamoeba castellanii str. Neff] >gi|440803989|gb|ELR24872.1| endonuclease/exonuclease/phosphatase family protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 70.4774 bits (171), Expect = 8.850e-11 Identity = 58/192 (30.21%), Postives = 83/192 (43.23%), Query Frame = 0 Query: 16 AFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSDTTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGHKGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSN 207 + + T+NV+F R ++IL L DVIC QE +N W + +D +++ + Y S +N YGV+ L+ R+ LPT MGRR L+ A Y+ + ++G VHLESL+SA LRAEQL IS L + G L GDF + Sbjct: 67 SLRLATYNVFFGQNTMRGRFRHILSMLPELDADVICVQE------------ANMEWI--EEMTDNEYVQQH-YFASDVNGRTFNGYGVVILS-RIPMADLTMWKLPTSMGRRALI--------------------ATYTINEETVSIGTVHLESLDSAQLRAEQLEKISGILASSPHAG----LMGDFNFDS 218 The following BLAST results are available for this feature:
BLAST of EWM26348.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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