EWM26345.1, cds4324 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|585108354|gb|EWM26345.1| (kdpg and khg aldolase [Nannochloropsis gaditana]) HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0 Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0
Query: 1 MWATVGGRDTMWLSRYVLFLLWSTTAGDAWGPPRSPLLQRRERMPSGLYTSHTGLAYCSQPSIKAAKPFDDDPAWFPSPSSFSATQHAGFSPPSTLPGPATTTREAHALACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQALERAPDGEMEGEAVRGG 348
MWATVGGRDTMWLSRYVLFLLWSTTAGDAWGPPRSPLLQRRERMPSGLYTSHTGLAYCSQPSIKAAKPFDDDPAWFPSPSSFSATQHAGFSPPSTLPGPATTTREAHALACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQALERAPDGEMEGEAVRGG
Sbjct: 1 MWATVGGRDTMWLSRYVLFLLWSTTAGDAWGPPRSPLLQRRERMPSGLYTSHTGLAYCSQPSIKAAKPFDDDPAWFPSPSSFSATQHAGFSPPSTLPGPATTTREAHALACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQALERAPDGEMEGEAVRGG 348
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|950034942|ref|WP_057158680.1| (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Massilia sp. Root351] >gi|945523854|gb|KQV79209.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Massilia sp. Root351]) HSP 1 Score: 149.443 bits (376), Expect = 4.932e-40 Identity = 89/222 (40.09%), Postives = 119/222 (53.60%), Query Frame = 0
Query: 110 ACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQA 331
+ DA PLVA+LRG+ ++ E L +AG M+ VP SP E ++ L+S S A + LGA TV+SV V AG I PH D ++I A G+ C+PG TPTEAF A+ GA +KLFP++ + P +V ++ A+LPP RLL GG+ E M YRAAG GF LG L+Q GL E+ RARAF++A
Sbjct: 12 SAFDALPLVAILRGLRPQEAEEVGAALYEAGFRMIEVPLNSPQPLESIE----LLSRSLPADAL--------------------LGAGTVLSVQAVQEVKNAGGQLIVMPHADTEVIRAAKAAGMFCVPGAATPTEAFAAVHAGADAVKLFPAELITPTLVRAMRAVLPPTLRLLPVGGITPEGMAPYRAAGVAGFGLGGALYQPGLSAAEVGERARAFVRA 209
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|653330271|ref|WP_027493301.1| (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Rhodanobacter sp. OR444] >gi|1016226628|gb|KZC35569.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Rhodanobacter sp. FW510-R12]) HSP 1 Score: 146.362 bits (368), Expect = 1.085e-38 Identity = 88/220 (40.00%), Postives = 123/220 (55.91%), Query Frame = 0
Query: 112 LDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQA 331
L+ PLVA+LRG+ + QTL QAG ++ VP SP F+ ++ +A + G C +GA TV++ AQVD AAAG + PH D +I A + G+LC+PG+ TPTEAF AL GA LKLFP+ V P + + A+LP +L GG+ A++M + AAGA+GF LGS+LF G++ GEL+ R +F QA
Sbjct: 6 LERLPLVAILRGIRPDEAVAVCQTLAQAGFRIMEVPLNSPQPFDSIRNIAQAL-----------------GKDC-------LIGAGTVMTAAQVDELAAAGGRLVVMPHADTAVIRAARQAGMLCMPGVATPTEAFSALDAGADGLKLFPADQVTPQGLKAWRAVLPRDVPVLPVGGITADNMAPWVAAGARGFGLGSSLFAPGIELGELSRRTLSFAQA 201
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|1197647468|ref|WP_086640993.1| (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Acetobacter tropicalis] >gi|1195454765|gb|OUI86219.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Acetobacter tropicalis]) HSP 1 Score: 145.591 bits (366), Expect = 1.280e-38 Identity = 83/220 (37.73%), Postives = 116/220 (52.73%), Query Frame = 0
Query: 112 LDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQA 331
L CPLVA+LRGV ++ + L +G ++ +P SP FE ++ L E P + +GA TV ++ QV+ A AG + PH+D +I A G++C PG+ TPTE F AL HGA LK+FP++ +PP + + ++ P TRL GG+ E M Y AGA GF LGS L++ G GE+AS ARAFI A
Sbjct: 6 LARCPLVAILRGVQPNEVVAIGKALVTSGFAIIEIPLNSPEAFESIRRL------------------------TLELGPNILVGAGTVTTLEQVERLAKAGGRLVVMPHSDHRVITAAKATGMICTPGVATPTEGFAALSHGADALKMFPAETLPPSALKAWRSVFPEGTRLFPVGGITPETMAPYVIAGAAGFGLGSALYRPGASPGEVASHARAFIHA 201
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|1011812930|ref|WP_062632550.1| (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia arationis] >gi|1019493424|emb|SAK48809.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia arationis]) HSP 1 Score: 144.821 bits (364), Expect = 5.075e-38 Identity = 86/227 (37.89%), Postives = 123/227 (54.19%), Query Frame = 0
Query: 110 ACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLAL-GAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQALERA 335
A ACPL+A+LRGVT D + + L +AG +V VP SP F+ + A+ + LPP A+ GA TV+ + VD AAG I PH+D D++ A HG+ C PG+ TP EAFLALK+GA VLK+FP++ + P +V + A++ L+ GG+ ++M + AGA GF LGS L++ G S A+AFI+ L+ A
Sbjct: 19 AAFSACPLIAILRGVTPADAADHGRALYEAGFRIVEVPLNSPQPFDSIAAI-------------------------RQALPPDAIVGAGTVLHFSFVDQVKAAGGELIVMPHSDADVVRAAKSHGMACAPGVATPNEAFLALKNGADVLKMFPAEQLGPEVVKAWRAVIASAVPLVPVGGIAPDNMGPFLTAGANGFGLGSALYKPGQSAAVTGSHAKAFIRGLQIA 220
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|1124617487|ref|WP_074898949.1| (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Stenotrophomonas maltophilia] >gi|1097629390|emb|SFR76892.1| 2-keto-3-deoxy-phosphogalactonate aldolase [Stenotrophomonas maltophilia]) HSP 1 Score: 144.05 bits (362), Expect = 6.904e-38 Identity = 87/225 (38.67%), Postives = 122/225 (54.22%), Query Frame = 0
Query: 110 ACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQALER 334
A + PLVA+LRG+T ++ L +AG ++ VP SP + ++ LA + G C +GA TV+S AQV AG + PH D ++I AH G++C PG+ TPTEAF AL+ GA LKLFP++ +PP ++ + +++LPP TRLL GG+ E M AYR AGA GF +GS L+ ++A RARAF A R
Sbjct: 4 AWMQPLPLVAILRGLTPQEAPAIGAALAEAGFHILEVPLNSPQPLQSIELLAKQL-----------------GDRC-------LVGAGTVLSTAQVQDVKNAGGRLVVMPHADVEVIAAAHASGMVCTPGVATPTEAFAALRAGADALKLFPAEQLPPPVLKAWSSVLPPGTRLLPVGGITPERMAAYRQAGAAGFGIGSALYAPKTLADDVARRARAFSDAWNR 204
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|764600104|ref|WP_044426216.1| (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Skermanella aerolata] >gi|763836620|gb|KJB97067.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Skermanella aerolata KACC 11604]) HSP 1 Score: 143.665 bits (361), Expect = 1.048e-37 Identity = 85/220 (38.64%), Postives = 119/220 (54.09%), Query Frame = 0
Query: 115 CPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQALER 334
PLVA+LRG+T + +T Q L + G ++ VP SP F+ + ++ L+ P+ A +GA TV++V QV + GA + PH D +II A G++ LPGI TPTEAF ALK GA LKLFP++ + P +V ++ A+LPP RLL GG+ + M Y AG GF LGS L+ G+ E+A RA F+ A R
Sbjct: 17 LPLVAILRGLTPTEAEDTAQALYERGFRLIEVPLNSPQPFDSIASIRKLL----------PADA--------------LVGAGTVMTVEQVSRLSDLGAELVVMPHADAEIIRAAKARGMVSLPGITTPTEAFSALKAGADALKLFPAELIGPKIVKAMRAVLPPDVRLLPVGGISPDTMTDYHDAGVAGFGLGSALYTPGMTVAEVAERANRFVTAWSR 212
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|1120233907|ref|WP_073100986.1| (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Candidimonas bauzanensis] >gi|1110444918|emb|SHG71911.1| 2-dehydro-3-deoxyphosphogalactonate aldolase [Candidimonas bauzanensis]) HSP 1 Score: 143.28 bits (360), Expect = 1.537e-37 Identity = 85/236 (36.02%), Postives = 126/236 (53.39%), Query Frame = 0
Query: 107 HALACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQALERAPDGEMEG 342
H LD PL+A+LRGVT ++ + + AG ++ VP SP ++ LA + P +GA TV+S V A AG I PH+DP ++ +A + G+LC+PG+ TPTEAF AL +GA LKL+P++ + P +V + A++P RLL GG+ ++M Y AGA GF LGS L++AG+ ++A+ ARAF A+ R D + G
Sbjct: 2 HIEPFLDKFPLIAILRGVTPQEAVAIAEEVVNAGFGILEVPLNSPQPLASIELLA-------------------------KRFPDQLVGAGTVMSPDDVRAVAQAGGQLILMPHSDPAVVRQAKQSGLLCVPGVATPTEAFAALANGADALKLYPAEQIAPAVVKAWRAVVPSRHRLLPVGGITPDNMEGYLRAGANGFGLGSALYKAGMASMDVAANARAFRLAVTRLKDAGLLG 212
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|502933869|ref|WP_013168845.1| (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Starkeya novella] >gi|296930535|gb|ADH91344.1| KDPG and KHG aldolase [Starkeya novella DSM 506]) HSP 1 Score: 142.895 bits (359), Expect = 1.548e-37 Identity = 89/227 (39.21%), Postives = 124/227 (54.63%), Query Frame = 0
Query: 110 ACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQALERAP 336
A L A PL+A+LRGV ++ L +AG ++ VP SP E LK++ +L S P + +GA TV+ A VD G + I PH D ++I RA + G+ C PG TPTEAF ALK GA +KLFP++ +PP +V + A+ P L+ GGVK E MPAY AGA+GF LGS L+Q G+ G E++ + AF +A++ P
Sbjct: 5 AQLAAFPLIAILRGVKPDEIVGVGDALVEAGFRIIEVPLNSP---EPLKSIGTLASRH----------------------PGVLVGAGTVLDPADVDRIRDVGGALIVMPHADIEVIGRAKQLGLACTPGAATPTEAFAALKAGADAVKLFPAEMLPPAIVKAWRAVFPAEVPLMPVGGVKPETMPAYWQAGARGFGLGSALYQPGMSGAEVSITSAAFARAVKELP 206
BLAST of EWM26345.1 vs. NCBI_GenBank
Match: gi|739590837|ref|WP_037448438.1| (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Skermanella stibiiresistens] >gi|587642768|gb|EWY41778.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Skermanella stibiiresistens SB22]) HSP 1 Score: 143.28 bits (360), Expect = 1.563e-37 Identity = 86/222 (38.74%), Postives = 118/222 (53.15%), Query Frame = 0
Query: 110 ACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQA 331
A PLVA+LRG+T + Q L G ++ VP SP+ F+ + A+ L+ P A +GA TV++ QV A GA + PH D ++I A G+ CLPG++TPTEAF ALK GA LKLFP++ + P +V ++ A++PP TRLL GGV + M YRAAG GF LGS L+ G+ +L RA F+ A
Sbjct: 12 AAFATLPLVAILRGLTPPEAEPAAQALYDRGFRLIEVPLNSPSPFDSIAAIRRLL----------PRDA--------------IVGAGTVMTTDQVGTLAGIGADIVVMPHADTEVIRAAKAAGMACLPGVMTPTEAFAALKAGADALKLFPAELISPRIVKAMRAVMPPATRLLPVGGVTPDTMREYRAAGVAGFGLGSALYTPGMPLSQLVERADLFVAA 209 The following BLAST results are available for this feature:
BLAST of EWM26345.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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