EWM26383.1, cds4321 (CDS) Nannochloropsis gaditana

Overview
NameEWM26383.1
Unique Namecds4321
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:313107..314813 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26383.1
Productmajor facilitator superfamily
Orig transcript idgnl|cribi|Naga_100031g2.2266.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:313107..314813 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR011701MFS
Homology
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|585108393|gb|EWM26383.1| (major facilitator superfamily [Nannochloropsis gaditana])

HSP 1 Score: 1155.97 bits (2989), Expect = 0.000e+0
Identity = 568/568 (100.00%), Postives = 568/568 (100.00%), Query Frame = 0
Query:    1 MRACIVVFSLLVLLGQLITALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGRPDPAVLPPTAPTSLTSAGMKSPRPDGPALTPSPTSGSHPTETEHAGLIGSLGHRGTYFETPHPSFYGPPPQHTVRSSSSSRLAPRERAWEEDREEGPVASAPAATTSTLVQGGQFPHEALRARLEHLAQLDAAVDAIDEDHLWHLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLKYYLPIHTPPPEGVDCSFRPVLPEWEKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVKHDYVTTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLRKYVVDGEETNPYHPLHPFHHGHAPPHLGGEVVPARCEREESNESKANGNEENRRLTAPKRPFRDYSTMSV 568
            MRACIVVFSLLVLLGQLITALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGRPDPAVLPPTAPTSLTSAGMKSPRPDGPALTPSPTSGSHPTETEHAGLIGSLGHRGTYFETPHPSFYGPPPQHTVRSSSSSRLAPRERAWEEDREEGPVASAPAATTSTLVQGGQFPHEALRARLEHLAQLDAAVDAIDEDHLWHLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLKYYLPIHTPPPEGVDCSFRPVLPEWEKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVKHDYVTTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLRKYVVDGEETNPYHPLHPFHHGHAPPHLGGEVVPARCEREESNESKANGNEENRRLTAPKRPFRDYSTMSV
Sbjct:    1 MRACIVVFSLLVLLGQLITALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGRPDPAVLPPTAPTSLTSAGMKSPRPDGPALTPSPTSGSHPTETEHAGLIGSLGHRGTYFETPHPSFYGPPPQHTVRSSSSSRLAPRERAWEEDREEGPVASAPAATTSTLVQGGQFPHEALRARLEHLAQLDAAVDAIDEDHLWHLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLKYYLPIHTPPPEGVDCSFRPVLPEWEKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVKHDYVTTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLRKYVVDGEETNPYHPLHPFHHGHAPPHLGGEVVPARCEREESNESKANGNEENRRLTAPKRPFRDYSTMSV 568          
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|553193480|ref|XP_005855785.1| (hypothetical protein NGA_2123800, partial [Nannochloropsis gaditana CCMP526] >gi|422293276|gb|EKU20576.1| hypothetical protein NGA_2123800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 239.195 bits (609), Expect = 1.265e-73
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
Query:   19 TALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGRPDPAVLP 135
            TALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGRPDPAVLP
Sbjct:    1 TALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGRPDPAVLP 117          
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|1149595986|gb|OON04160.1| (hypothetical protein BSLG_05683 [Batrachochytrium salamandrivorans])

HSP 1 Score: 168.318 bits (425), Expect = 1.003e-40
Identity = 149/511 (29.16%), Postives = 232/511 (45.40%), Query Frame = 0
Query:    5 IVVFSLLVLLGQLITALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSRE--VAFALGFTLSVSRFGSVLNDWGSPFIAEKA--NVVTAFWFGALLCLASTITAFLLACI-------DHNHRSRHHGRPDPAVLPPTAPTSLTSAG----MKSPRPDGPALTPSPTSG----SHPTETEHAGLIGSLGHRGTYFETPHPSFYGPPPQHTVRSSSSSRLAPRERAWEEDREEGPVASAPAATTSTLVQGGQFPHEALRARLEHLAQLDAAVDAIDEDHLWHLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLKYYLPIHTPPPEGVDCSFRPVLPEWEKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVKH--DYVTTEYFFIAVSVTGVIVAVCLMVEDEKHG 494
            +V FSLLV +GQ I A G++  S   M+ GRL+FG+GGE L V  ++ I+ WF  R+  +AFALG  L+ +R  +  ND  SP+IA +A   V TA W G  +   S + A  L  I       + N  S      + A+  PT  T L S       + P+   PAL  S +      SH  +   A +    G        P P+     P  +V+  +   LAP + +   D +    A++ +A T   +  G    E      +           +  D +W   G    FW+L       YG+I+PF +V   +  + + P              P      KY   V + E + G + SVP II+ + +PL GIVIDR G R+  + +  L++   H +L     +P++ +  LG+AYS+ A+ +WP VP  V       +  TA+G+LT   N+S+ +FP+ VA +    H  D+   + FF+ + VT  +    L+  D + G
Sbjct:    1 MVAFSLLVCIGQGIFAAGVSTKSFPAMIFGRLLFGMGGESLEVASASIITEWFEGRQTGLAFALGMHLASARLATAANDNLSPWIAHRAANGVPTAVWVGLGVASCSLLCALGLGQICGGIFFGNFNRDSEE----ELAIEAPTMTTELESDDSTLQAQPPQTSIPALPTSASQSNAVVSHSVDEPSAAISKPTGQPSPQRSLP-PALIITTPNTSVKLDT---LAPDDASHSSDAD----ATSISALTDPQLDAGYESEEYDEEDEQ-----------VHVDQIWSFGG---SFWLLLLTTIFIYGSILPFFHVCTDFFQEKWYP------------GDPQTAGSGKYNIRVFN-ECIYG-IMSVPDIISAVGSPLAGIVIDRVGHRSTLLPIASLIIFTAHAVLNYSNVTPLIAMVLLGVAYSLFASALWPCVPFLV----GRHQIATAYGLLTSALNVSLLVFPIVVAYVRTQGHAKDFSGMQIFFMGMCVTAFVSCTALLAWDIRFG 467          
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|695428013|ref|XP_009529845.1| (hypothetical protein PHYSODRAFT_560629 [Phytophthora sojae] >gi|348676278|gb|EGZ16096.1| hypothetical protein PHYSODRAFT_560629 [Phytophthora sojae])

HSP 1 Score: 132.109 bits (331), Expect = 2.127e-29
Identity = 94/317 (29.65%), Postives = 142/317 (44.79%), Query Frame = 0
Query:  244 PHEALRARLEHLAQLDAAVDAIDEDHLWHLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLK------------------YYLPIH---------TPPPEG-------VDCSFRPVLPEW---------------------------EKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVKHDYV-TTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLR 498
            P +    +L    Q +A V A +  H   +  F   FW+LA  C + YG ++PFNNVA   L++                  Y   I          + PP G        +C+ +  L +W                           + YCA        +    S+P+II+ +++P +G V+DR G R    L+ P+ L A H +L +   S  VPL   G+AYS+ AA +WPSVP  V A    +  GTA+G +T  QN+ +ALFP+AVAA  N    Y+   E  F++  V G +V + L V D ++G++L 
Sbjct:  165 PIDKRAEKLTKENQKEAGV-AAESIHFSDIKHFRPAFWLLALSCLVVYGCVIPFNNVASSLLMERDFFKEPPELCRRCGEGLYDFEIDCAEIVPGCPSVPPYGWPLPLLSANCTIKEPLDQWNCSTSPPLIEGDKINCDDEAWRLGPFTQTYCATKMDAAQKAATPMSIPYIISAVISPFLGFVVDRIGLRAFLALVAPVALTAVHVMLGLTQVSLYVPLVLQGVAYSVFAAALWPSVPYVVEA----KHVGTAYGAITAIQNIGLALFPLAVAAEFNHDDRYIPGVELLFVSFGVLGSLVGIALNVVDYQNGSILN 476          

HSP 2 Score: 90.1225 bits (222), Expect = 1.848e-15
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 0
Query:   22 GITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDH 119
            G+ V   G    GR++FG GGE L V Q   +++WF + E+A ALG  LSV+R GSV+N+  SP +++ ++V TA W G ++CLAST    LL  ID 
Sbjct:   72 GVLVDRFGARF-GRVVFGFGGESLGVAQGTLVASWFKNSELALALGINLSVARLGSVINNELSPVVSQASSVSTALWVGVIMCLASTFMVLLLIPIDK 168          
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|675191731|ref|XP_008904750.1| (hypothetical protein PPTG_10966 [Phytophthora parasitica INRA-310] >gi|566024950|gb|ETI47861.1| hypothetical protein F443_08001 [Phytophthora parasitica P1569] >gi|567962255|gb|ETK87782.1| hypothetical protein L915_07826 [Phytophthora parasitica] >gi|567990983|gb|ETL41201.1| hypothetical protein L916_07756 [Phytophthora parasitica] >gi|568020235|gb|ETL94369.1| hypothetical protein L917_07641 [Phytophthora parasitica] >gi|568050655|gb|ETM47589.1| hypothetical protein L914_07719 [Phytophthora parasitica] >gi|568095545|gb|ETN10313.1| hypothetical protein PPTG_10966 [Phytophthora parasitica INRA-310] >gi|570328618|gb|ETO76566.1| hypothetical protein F444_08046 [Phytophthora parasitica P1976] >gi|570952432|gb|ETP17689.1| hypothetical protein F441_07970 [Phytophthora parasitica CJ01A1] >gi|570986751|gb|ETP45680.1| hypothetical protein F442_07939 [Phytophthora parasitica P10297] >gi|970644846|gb|KUF85525.1| Major Facilitator Superfamily (MFS) [Phytophthora nicotianae])

HSP 1 Score: 129.413 bits (324), Expect = 2.749e-28
Identity = 89/299 (29.77%), Postives = 132/299 (44.15%), Query Frame = 0
Query:  262 VDAIDEDHLWHLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLKYYLPIHTP---------------------------PPEG-------VDCSFRPVLPEW---------------------------EKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVKHDYV-TTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLR 498
            V A +  H   +  F   FW+LA  C + YG ++PFNNVA   L++       P                           PP G        +C+ +  L +W                           + YCA        +    S+P+II+ +++P +G V+DR G R    L+ PL L   H +L +   S  VPL   G+AYS+ AA +WPSVP  V A    +  GTA+G +T  QN+ +ALFP+AVAA  N    Y+   E  F++  V G +V + L V D ++G++L 
Sbjct:  213 VTAAESIHFSDIKHFRPAFWLLALSCLVVYGCVIPFNNVASSLLMERDFFKEPPELCRRCGEGLYIGEIDCQEIVPGCPSVPPYGWPLPLLSANCTIKEPLDQWNCSTSPPLILGDKINCDNEAWKLGPLTKTYCATKTDAAQKAATPMSIPYIISAVISPFLGFVVDRIGLRAFLALVAPLALTIVHVMLGLTQVSLYVPLVLQGVAYSVFAAALWPSVPYVVEA----KHVGTAYGAITAIQNIGLALFPLAVAAEFNHDDRYIPGVELLFVSFGVLGSLVGIALNVVDYQNGSILN 507          

HSP 2 Score: 113.62 bits (283), Expect = 4.867e-23
Identity = 61/151 (40.40%), Postives = 86/151 (56.95%), Query Frame = 0
Query:    2 RACIVVFSLLVLLGQLITALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGRPDPAVLPPTAPTSLTSAGMKSPRP 152
            R  +  FS  +L GQLI A G ++ S  LML GR++FG GGE L V Q   +++WF + E+A ALG  LSV+R GSV+N+  SP +A+ ++V  A W G ++C+AST T  L+  ID              V   TA  S+  + +K  RP
Sbjct:   82 RVMLFAFSTAILTGQLIFATGCSLSSFNLMLFGRVVFGFGGESLGVAQGTLVASWFKNSELALALGINLSVARLGSVINNELSPIVAQASSVSAALWVGVIMCVASTFTVLLVIPIDKRAEKMTKENQKEGV---TAAESIHFSDIKHFRP 229          
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|953495891|emb|CEG42787.1| (major facilitator superfamily [Plasmopara halstedii])

HSP 1 Score: 125.176 bits (313), Expect = 6.239e-27
Identity = 87/296 (29.39%), Postives = 133/296 (44.93%), Query Frame = 0
Query:  266 DEDHLWHLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLK------------------YYLPIH---------TPPPEG-------VDCSFRPVLPEW---------------------------EKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVKHDYV-TTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLRK 499
            D  H   +  F   FW+LA  C + YG ++PFNNVA   L++                  Y   I          + PP G        +C+ +  L +W                           + YCA   +    +    S+P+II+ +++P +G  +DR G R +  L+  L L   H +L +   S  VPL   G+AYS+ AA +WPSVP  V A    +  GTA+G +T  QN+ +ALFP+AVA+  N  + Y+   E  F +  + G IV V L V D ++G++L +
Sbjct:  218 DSIHFSDVRHFRLAFWLLALSCLVVYGCVIPFNNVASSLLMERDFFKEPPELCRRCGDGLYIRKIDCQEIVDGCPSVPPYGWPLPLLSTNCTIKEPLDQWNCSSSPPLIEGDKINCDEEAWKVGPLTKMYCATKTNAAQKAATPMSIPYIISAVISPFLGFAVDRIGLRAMLALVASLALTLVHILLGLTQVSLYVPLLLQGVAYSVFAAALWPSVPFVVEA----KHVGTAYGAITAIQNIGLALFPLAVASEFNHNNRYIPGVELLFASFGLLGSIVGVALNVVDFQNGSILNR 509          

HSP 2 Score: 111.309 bits (277), Expect = 2.714e-22
Identity = 56/127 (44.09%), Postives = 75/127 (59.06%), Query Frame = 0
Query:    2 RACIVVFSLLVLLGQLITALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGR 128
            R  +  FS  +L GQ I A G ++ S  LML GR+IFG GGE L V Q   +++WF + E+A ALG  LSV+R GSV+N+  SPF+A+  +V  A W G ++C+AS  T  LL  ID         R
Sbjct:   82 RVMLFAFSTAILAGQFIFATGCSLSSFNLMLFGRVIFGFGGESLGVAQGTLVASWFKNSELALALGINLSVARLGSVINNELSPFVAQAFSVSKALWVGVIMCMASAFTVLLLIPIDQRADQLTKKR 208          
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|224001012|ref|XP_002290178.1| (transporter belonging to the MFS superfamily [Thalassiosira pseudonana CCMP1335] >gi|220973600|gb|EED91930.1| transporter belonging to the MFS superfamily [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 123.635 bits (309), Expect = 1.849e-26
Identity = 87/283 (30.74%), Postives = 134/283 (47.35%), Query Frame = 0
Query:  269 HLWHLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLKYYLPIHTPPPEGVDCSFRPVLPEWEKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVK-HDYV-TTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLRKYVVDGEETNPYHPLHPFHHGHAPPHLGGEVVPARCEREESNESKANGNEE 549
            H+  +  F  +FW+L   C + YG ++PFNNVA   LL                              E  +      +  S+P++I+ L +PL+G ++D+ G R     L   LL+  H  L     SPVVPL G G+AYS+ A+V+WPSVPLTV    + +  GTAFG++T  QN+ +ALFP+ +AA+ N     Y+   E FF++ +  G+IV + ++  D + G  L            Y  L     G A      E V     RE+ ++ +   +E+
Sbjct:  261 HITDVKRFGPLFWLLTLSCFVVYGCVLPFNNVASGILL------------------------------ERSYFSASPDKFMSIPYLISALSSPLLGHLVDKIGRRAQLATLSSGLLVLVHLALATSQFSPVVPLIGQGIAYSLYASVLWPSVPLTV----AKQYTGTAFGVITSIQNIGLALFPLMIAAIYNASGQQYIPNVELFFVSCATAGLIVGLTMIQLDRRSGKKL------------YASLSSLDKGKADRVKAKENV-----REQGDDFEDVDDEQ 492          

HSP 2 Score: 109.768 bits (273), Expect = 8.319e-22
Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = 0
Query:    4 CIVVFSLLVLLGQLITALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGRPDPAVLPPTAPTSL 142
            C+ +F+  V  G ++ ++G+   S  LM  GR  FGLG E L V QS   S WF  +EVAFA+G  LSVSR GS+ N+  SP +A  AN+  +FW GA+L L S + A ++  +D     +   R + A    TAP ++
Sbjct:  122 CLALFAFTVFCGSVLLSIGVANKSWHLMYFGRFTFGLGAESLCVAQSTITSEWFEGKEVAFAMGIGLSVSRLGSIWNNIVSPKVANSANIEISFWIGAVLTLVSLLLAGVIVLVDRKATKKIKRRTELASNACTAPETV 260          
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|672822737|gb|KFH67631.1| (hypothetical protein MVEG_06363 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 119.783 bits (299), Expect = 8.052e-25
Identity = 77/243 (31.69%), Postives = 129/243 (53.09%), Query Frame = 0
Query:  264 AIDEDHLW-HLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLKYYLPIHTPPPEGVDCSFRPVLPEWEKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVKH-DYVTTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLRKYVVDG 504
            A D+  L+  +    T FWIL   C L YGA +PFN+++  +L K + P + P                             +G + S+P +++ + +PL G ++DRFG R  Y+ L  LLL+  H  L     +PV+ +  LGLAYS+ A+ +WP +P  V       + GTA+G++T+  N+S+ +FP+AVAA+ ++    Y   E  FI+++  G I+++ L + D++ G  L+  +VDG
Sbjct:  329 AEDDQMLYSEIFTLQTNFWILCLCCILLYGAAVPFNHISSDFLQKKWYP-NNPTR---------------------------AGTVMSIPDLVSSVGSPLCGYLVDRFGHRARYIPLSALLLIWAHTQLGFTQLNPVLAMLVLGLAYSLFASALWPCIPFLVE----DHQLGTAYGLVTIALNISLTVFPIAVAAILHLTDGSYQWVEGLFISLAGIGFIMSIVLNILDKRQGGQLQ--MVDG 537          

HSP 2 Score: 102.064 bits (253), Expect = 3.918e-19
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 0
Query:    5 IVVFSLLVLLGQLITALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKA-NVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHG 127
            +++FSL + LGQ + A+G++  S+ +M+LGRLIFG+GGECL V Q+   + WF SR +  ALG  LS +R G+ LND  SP IA  A  V+ A W G  +C+ S    F LA +D     +  G
Sbjct:  152 LILFSLCICLGQAVFAIGLSFKSITVMVLGRLIFGIGGECLEVAQAKITTDWFKSRWLGLALGLNLSSARIGTALNDNLSPAIATTAGGVLAASWTGVGVCVLSLGCGFALAYLDGPESRKQSG 275          
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|219112637|ref|XP_002178070.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410955|gb|EEC50884.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 118.627 bits (296), Expect = 1.290e-24
Identity = 85/297 (28.62%), Postives = 128/297 (43.10%), Query Frame = 0
Query:  276 FDTMFWILAGVCALCYGAIMPFNNVAQVYLLKYYLPIHTPPPE-------------------------GVDCS---FRPVLPE-----------------------------W-----EKYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAAL-SNVKHDYV-TTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLRKYVVDGEETN 508
            F  MFW+L+  C   Y  I+P+NNVA   LL+  L    PP E                         G  CS   F PVLP                              W     + YC  +      +GR+ S+P+ I+  L+P +G V+DR G R     +   LL+  H  +      P +PL G GLAY++ ++V+WPS+ LTV      R  G AFG++T  QN+ + L PMA+A++ ++  H Y+   E FF   +V+G ++ + +   D+  G  L    V     +
Sbjct:  280 FSPMFWLLSASCLTVYACILPWNNVASGILLERDL-FQAPPAECHLTFPDQCSAGNLLNFSNPAIDANGNTCSGSNFAPVLPSSLNVSGMDGKPDILIDHLSAADVDCDKPFWSEDCVKDYCQALGKASESAGRVMSIPYSISACLSPFLGGVVDRIGHRATITFVASFLLIGVHSTMAFTTFRPAIPLIGQGLAYALYSSVLWPSITLTV----PQRSTGVAFGVITSIQNIGLTLVPMAIASIYTSSGHCYIPYVELFFTCCAVSGAMLGIGVNFLDQLTGNKLNGISVQSRAAD 571          

HSP 2 Score: 93.5893 bits (231), Expect = 2.096e-16
Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 0
Query:    4 CIVVFSLLVLLGQLITALGITVHSMGLMLLGRLIFGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRS 123
            C+++F+    LGQLI A G    +   MLLGR ++G+GGE + V  S  ++ WF  +E+AF+ G  L++SR GSV N+  SP IA   +   A W G  L   + + A  +  +D  H S
Sbjct:  117 CLMIFAAFCFLGQLIFAAGTAYRNWTFMLLGRAVYGIGGESICVAYSTLLTEWFAGKELAFSFGIALAISRLGSVFNNLASPVIANSFSTPWALWAGVALNFMAVVVAAGIKNVDAQHSS 236          
BLAST of EWM26383.1 vs. NCBI_GenBank
Match: gi|301122213|ref|XP_002908833.1| (Major Facilitator Superfamily (MFS) [Phytophthora infestans T30-4] >gi|262099595|gb|EEY57647.1| Major Facilitator Superfamily (MFS) [Phytophthora infestans T30-4])

HSP 1 Score: 117.857 bits (294), Expect = 1.505e-24
Identity = 91/299 (30.43%), Postives = 133/299 (44.48%), Query Frame = 0
Query:  262 VDAIDEDHLWHLMGFDTMFWILAGVCALCYGAIMPFNNVAQVYLLKYYLPIHTP---------------------------PPEG-------VDCSFRPVLPEWE---------------------------KYCAEVEHVEGLSGRLQSVPFIIAGLLTPLIGIVIDRFGFRTLYMLLGPLLLLATHFILLVGGTSPVVPLAGLGLAYSIIAAVIWPSVPLTVHASESSRRCGTAFGILTVFQNLSMALFPMAVAALSNVKHDYV-TTEYFFIAVSVTGVIVAVCLMVEDEKHGAVLR 498
            V A +  HL  +  F   FW+LA  C + YG ++PFNNVA   L++       P                           PP G        +C+ +  L +W+                            YCA        +    S+P+II+ +++P +G V+DR G R    LL PL L   H +L +   S  VPL   G+AYS+ AA +WPSVP  V A    +  GTA+G +T  QN+ +ALFP+AVAA  N    Y+   E  F++  V G +V + L V D ++G++L 
Sbjct:  177 VTAAESIHLSDVKHFRPAFWLLALSCLVVYGCVIPFNNVASSLLMERDFFKEPPELCRRCGEGLYIGEIDCQEIVSGCPSVPPYGWPLPLLSANCTIKEPLDQWDCSTSPPLILGDKINCDDEAWKLGPLTKTYCATKTDAAQKTATPMSIPYIISAVISPFLGFVVDRIGLRAFLALLAPLALTVVHVMLGLTQVSLYVPLVLQGVAYSVFAAALWPSVPYVVEA----KHVGTAYGAITAIQNIGLALFPLAVAAEFNHDDRYIPGVELLFVSFGVLGSLVGIALNVVDYQNGSILN 471          

HSP 2 Score: 85.5001 bits (210), Expect = 5.343e-14
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 0
Query:   10 LLVLLGQLITALGITVHSMGLMLLGRLI-FGLGGECLVVGQSAFISAWFHSREVAFALGFTLSVSRFGSVLNDWGSPFIAEKANVVTAFWFGALLCLASTITAFLLACIDHNHRSRHHGRPDPAVLPPTAPTSLTSAGMKSPRP 152
            L  LL  L +   I +   G +L+ R + FG GGE L V Q   +++WF + E+A ALG  LSV+R GSV+N+  SP +A+ ++V  A W G ++C+ S +T  L+  ID              V   TA  S+  + +K  RP
Sbjct:   53 LFNLLYTLYSIPNILLPFFGGVLVDRFVMFGFGGESLGVAQGTLVASWFKNSELALALGINLSVARLGSVINNELSPIVAQSSSVSAALWVGVIMCVGSAVTVLLVIPIDKRAEKMSRENQKEGV---TAAESIHLSDVKHFRP 193          
The following BLAST results are available for this feature:
BLAST of EWM26383.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108393|gb|EWM26383.1|0.000e+0100.00major facilitator superfamily [Nannochloropsis gad... [more]
gi|553193480|ref|XP_005855785.1|1.265e-73100.00hypothetical protein NGA_2123800, partial [Nannoch... [more]
gi|1149595986|gb|OON04160.1|1.003e-4029.16hypothetical protein BSLG_05683 [Batrachochytrium ... [more]
gi|695428013|ref|XP_009529845.1|2.127e-2929.65hypothetical protein PHYSODRAFT_560629 [Phytophtho... [more]
gi|675191731|ref|XP_008904750.1|2.749e-2829.77hypothetical protein PPTG_10966 [Phytophthora para... [more]
gi|953495891|emb|CEG42787.1|6.239e-2729.39major facilitator superfamily [Plasmopara halstedi... [more]
gi|224001012|ref|XP_002290178.1|1.849e-2630.74transporter belonging to the MFS superfamily [Thal... [more]
gi|672822737|gb|KFH67631.1|8.052e-2531.69hypothetical protein MVEG_06363 [Mortierella verti... [more]
gi|219112637|ref|XP_002178070.1|1.290e-2428.62predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|301122213|ref|XP_002908833.1|1.505e-2430.43Major Facilitator Superfamily (MFS) [Phytophthora ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4331rna4331Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications