EWM26356.1, cds4315 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|585108366|gb|EWM26356.1| (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 692.575 bits (1786), Expect = 0.000e+0 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHSTDSRGGGSEEGAGEVKKEEEEADIGQDGVPNSSLPAVPTGCVCCGCRRQRRGPNGGSSSEDLRGRRRRRGWRQGEGEEGGEAGKEEAAEPGLSIGRGVGRKTAANRACQGLCAGGRSVLHASRGIEMGGAAGGRKEGGEEREEVKTYLDREHGADFGRETCCG 345
MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHSTDSRGGGSEEGAGEVKKEEEEADIGQDGVPNSSLPAVPTGCVCCGCRRQRRGPNGGSSSEDLRGRRRRRGWRQGEGEEGGEAGKEEAAEPGLSIGRGVGRKTAANRACQGLCAGGRSVLHASRGIEMGGAAGGRKEGGEEREEVKTYLDREHGADFGRETCCG
Sbjct: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHSTDSRGGGSEEGAGEVKKEEEEADIGQDGVPNSSLPAVPTGCVCCGCRRQRRGPNGGSSSEDLRGRRRRRGWRQGEGEEGGEAGKEEAAEPGLSIGRGVGRKTAANRACQGLCAGGRSVLHASRGIEMGGAAGGRKEGGEEREEVKTYLDREHGADFGRETCCG 345
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|553179356|ref|XP_005852687.1| (adp-ribosylation factor, partial [Nannochloropsis gaditana CCMP526] >gi|422295845|gb|EKU23144.1| adp-ribosylation factor, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 466.077 bits (1198), Expect = 5.069e-164 Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHSTDSRGGGSEEGAGEVKKEEEEADIGQDGVPNSSLPAVPTGCVCCGCR 229
MGQLCTRL ELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIV GL+VKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHSTDSRGGGSEEGAGEVKKEEEEADIGQDGVPNSSLPAVPTGCVCCGCR
Sbjct: 1 MGQLCTRLAELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVHGLDVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHSTDSRGGGSEEGAGEVKKEEEEADIGQDGVPNSSLPAVPTGCVCCGCR 229
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|585106427|gb|EWM24831.1| (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 195.282 bits (495), Expect = 1.026e-57 Identity = 86/179 (48.04%), Postives = 131/179 (73.18%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLE 179
MGQL TR+++++ + ++R+++LGLD AGKTT +YRL LG+ V ++PT+GFN E+V Y+ +F +WD+GGQ ++RKLW+HY + DALIFV+D+ DRARL EARS +L L +++LL+ ANK D A+S E+ + L++ V RPW++Q +CA++G GL EG+DWL + L+
Sbjct: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLK 179
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|290986091|ref|XP_002675758.1| (ARF/SAR family small GTPase [Naegleria gruberi] >gi|284089356|gb|EFC43014.1| ARF/SAR family small GTPase [Naegleria gruberi]) HSP 1 Score: 190.274 bits (482), Expect = 2.637e-56 Identity = 89/174 (51.15%), Postives = 123/174 (70.69%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWL 174
MGQ +L E + + E R++L+GLD AGKTT +Y+L L + V T+PT+GFN E V+Y++ NF MWD+GGQ KIR LW+HY + +A+IFVVD+ DR R+ EAR ++ML L+ V+LILANK D +AMS+AE+ L + + +R W++Q CAISGQGL EG+DWL
Sbjct: 1 MGQSIAKLFENLFKNKEARILLVGLDAAGKTTILYKLKLDENVTTIPTIGFNVETVQYKKINFTMWDVGGQDKIRPLWRHYYANTNAVIFVVDSNDRDRIGEARDELQKMLSDDQLRECVVLILANKQDLPNAMSAAEMTDKLSLHN-LKQRNWFIQPCCAISGQGLFEGLDWL 173
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|50310595|ref|XP_455317.1| (hypothetical protein [Kluyveromyces lactis NRRL Y-1140] >gi|49644453|emb|CAG98025.1| KLLA0F05225p [Kluyveromyces lactis] >gi|574144006|dbj|BAO41796.1| ADP-ribosylation factor [Kluyveromyces marxianus DMKU3-1042] >gi|693904431|dbj|BAP73236.1| hypothetical protein KMAR_60497 [Kluyveromyces marxianus]) HSP 1 Score: 189.889 bits (481), Expect = 4.235e-56 Identity = 88/182 (48.35%), Postives = 125/182 (68.68%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHS 182
MG ++L + E R++++GLD AGKTT +Y+L LG+ V T+PT+GFN E V Y+ +F +WD+GGQ KIR LW+HY + + +IFVVD+ DRAR+AEAR +RML ++N VLL+ ANK D AM +AEI + L + + +RPW++Q TCA SG+GL EG++WL TL+ S
Sbjct: 1 MGVSFSKLFSNLFGHKEMRILMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRARIAEAREVLQRMLNEDEIRNAVLLVFANKQDLPEAMPAAEITEKLGLHS-IRQRPWYIQATCATSGEGLYEGLEWLSTTLKNQS 181
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|761759793|emb|CEP62540.1| (LALA0S05e07910g1_1 [Lachancea lanzarotensis]) HSP 1 Score: 189.504 bits (480), Expect = 6.666e-56 Identity = 86/182 (47.25%), Postives = 126/182 (69.23%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHS 182
MG ++L + E R++++GLD AGKTT +Y+L LG+ V T+PT+GFN E V Y+ +F +WD+GGQ KIR LW+HY + + +IFVVD+ DR+R++EAR +RML ++N VLL+ ANK D AMS+AEI + L + + +RPW++Q TCA SG+GL EG++WL +L+ S
Sbjct: 1 MGLYISKLFNSLVGSKEMRILMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRISEAREVLQRMLNEDEIRNAVLLVFANKQDLPEAMSAAEITEKLGLHS-IRQRPWFIQATCATSGEGLYEGLEWLSNSLKNQS 181
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|1092386773|emb|SCV99832.1| (LAFE_0B03488g1_1 [Lachancea fermentati]) HSP 1 Score: 189.504 bits (480), Expect = 7.113e-56 Identity = 86/182 (47.25%), Postives = 127/182 (69.78%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHS 182
MG ++L + E R++++GLD AGKTT +Y+L LG+ V T+PT+GFN E V Y+ +F +WD+GGQ KIR LW+HY + + +IFVVD+ DR+R++EAR +RML ++N VLL+ ANK D AMS+AEI + L + + +RPW++Q TCA SG+GL EG++WL +L+ +S
Sbjct: 1 MGLYISKLFNSLVGSREMRILMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRISEAREVLQRMLNEDEIRNAVLLVFANKQDLPEAMSAAEITEKLGLHS-IRQRPWFIQATCATSGEGLYEGLEWLSNSLKNNS 181
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|255719392|ref|XP_002555976.1| (KLTH0H02222p [Lachancea thermotolerans CBS 6340] >gi|238941942|emb|CAR30114.1| KLTH0H02222p [Lachancea thermotolerans CBS 6340]) HSP 1 Score: 188.734 bits (478), Expect = 1.288e-55 Identity = 86/182 (47.25%), Postives = 125/182 (68.68%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHS 182
MG ++L + E R++++GLD AGKTT +Y+L LG+ V T+PT+GFN E V Y+ +F +WD+GGQ KIR LW+HY + + +IFVVD+ DR+R++EAR +RML ++N VLL+ ANK D AMS+AEI + L + + +RPW++Q TCA SG+GL EG++WL L+ S
Sbjct: 1 MGTSFSKLFSSLFGHKEMRILMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRISEAREVLQRMLNEDEIRNAVLLVFANKQDLPEAMSAAEITEKLGLHS-IRQRPWFIQATCATSGEGLYEGLEWLSNNLKNQS 181
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|145239679|ref|XP_001392486.1| (ADP-ribosylation factor [Aspergillus niger CBS 513.88] >gi|317030395|ref|XP_003188741.1| ADP-ribosylation factor [Aspergillus niger CBS 513.88] >gi|134076997|emb|CAK45406.1| unnamed protein product [Aspergillus niger] >gi|350629619|gb|EHA17992.1| hypothetical protein ASPNIDRAFT_208201 [Aspergillus niger ATCC 1015] >gi|358372822|dbj|GAA89423.1| ADP-ribosylation factor [Aspergillus kawachii IFO 4308] >gi|966765802|dbj|GAQ41653.1| ADP-ribosylation factor [Aspergillus niger] >gi|1002323938|dbj|GAT29453.1| ADP-ribosylation factor [Aspergillus luchuensis] >gi|1111703923|gb|OJI90848.1| hypothetical protein ASPTUDRAFT_26342 [Aspergillus tubingensis CBS 134.48] >gi|1111907941|gb|OJJ73804.1| hypothetical protein ASPBRDRAFT_41524 [Aspergillus brasiliensis CBS 101740] >gi|1114063251|gb|OJZ88249.1| hypothetical protein ASPFODRAFT_130886 [Aspergillus luchuensis CBS 106.47] >gi|1147635400|gb|OOG00959.1| hypothetical protein ASPCADRAFT_202804 [Aspergillus carbonarius ITEM 5010] >gi|1213319088|gb|OWW28323.1| ADP-ribosylation factor family protein [Aspergillus niger]) HSP 1 Score: 188.734 bits (478), Expect = 1.373e-55 Identity = 88/184 (47.83%), Postives = 126/184 (68.48%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHSTD 184
MG ++L + + R E R++++GLD AGKTT +Y+L LG+ V T+PT+GFN E V Y+ F +WD+GGQ KIR LW+HY ++ +IFVVD+ DR R+ EAR +RML L++ +LL+ ANK D +AMS AEI Q L ++ + RRPW++Q TCA +G GL EG++WL +TL + D
Sbjct: 1 MGLTFSKLFDRLWGRKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLT-RRPWYIQSTCATTGDGLYEGLEWLAETLRKTNRD 183
BLAST of EWM26356.1 vs. NCBI_GenBank
Match: gi|949381319|emb|CUS23096.1| (LAQU0S08e02036g1_1 [Lachancea quebecensis]) HSP 1 Score: 190.66 bits (483), Expect = 2.128e-55 Identity = 86/182 (47.25%), Postives = 125/182 (68.68%), Query Frame = 0
Query: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLEGHS 182
MG ++L + E R++++GLD AGKTT +Y+L LG+ V T+PT+GFN E V Y+ +F +WD+GGQ KIR LW+HY + + +IFVVD+ DR+R++EAR +RML ++N VLL+ ANK D AMS+AEI + L + + +RPW++Q TCA SG+GL EG++WL L+ S
Sbjct: 75 MGTSFSKLFSSLFGHKEMRILMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRISEAREVLQRMLNEDEIRNAVLLVFANKQDLPEAMSAAEITEKLGLHS-IRQRPWFIQATCATSGEGLYEGLEWLSNNLKNQS 255 The following BLAST results are available for this feature:
BLAST of EWM26356.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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