EWM26354.1, cds4305 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26354.1 vs. NCBI_GenBank
Match: gi|585108364|gb|EWM26354.1| (hypothetical protein Naga_100031g19 [Nannochloropsis gaditana]) HSP 1 Score: 1217.99 bits (3150), Expect = 0.000e+0 Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0
Query: 1 MAYTGSTQAEKGGEGGIDKRGGGLPWQPPPRFPGPLGLLGSRHPATSDQDSAGRTYRDLDKQERQQTQEPLNPPSGTGSNAVNVNLLPYFKQPRGAWHQMCEDYGLPVSGVVNAQDLRAVLGCTCAEVALGWQDEALRVGKKMAGVLAALNYTSDGSVSVTFADPTGRVQGYLHPDVIDEYGPDLCVGSVMVLSGAAILVSGPGVQRWLNVVPENVRGFYKAVGIEKSEMKKKNGGERVEIGGIMAVDGEEPGRPSGVRYGEEEEGLVAMGVEDTERGGGVGVDESVRPQSVSAHTPNPPASSWHGGGQAGEVHSGMRLSMGWATEDSRMQALAMLGPGVDGVGGEEGGEEGMEEGAEDVWEGEEKGMDLQEGTSWAREGAGEGLGGGPEGMPRREARFQHPGKFFSMDHDCGRPLRGRAGAHSAGRGQEPVEKIGSDAASPSAYFLGLMGGRRRGEGRGEGGISRFEGPSSLDSTVAQPGDDVVERRKEKEGMGGRKSAEEEACEALLQEWVGRRKAGAEGEEGMEFEQGGRREGWSLSRGGVGEGGRGSGAGGAGREAIESGIIPPPPPLSVGPCVIEGGKDREREMLVGVGGGEGGEGGREEVDVLDEALEEDEALWA 621
MAYTGSTQAEKGGEGGIDKRGGGLPWQPPPRFPGPLGLLGSRHPATSDQDSAGRTYRDLDKQERQQTQEPLNPPSGTGSNAVNVNLLPYFKQPRGAWHQMCEDYGLPVSGVVNAQDLRAVLGCTCAEVALGWQDEALRVGKKMAGVLAALNYTSDGSVSVTFADPTGRVQGYLHPDVIDEYGPDLCVGSVMVLSGAAILVSGPGVQRWLNVVPENVRGFYKAVGIEKSEMKKKNGGERVEIGGIMAVDGEEPGRPSGVRYGEEEEGLVAMGVEDTERGGGVGVDESVRPQSVSAHTPNPPASSWHGGGQAGEVHSGMRLSMGWATEDSRMQALAMLGPGVDGVGGEEGGEEGMEEGAEDVWEGEEKGMDLQEGTSWAREGAGEGLGGGPEGMPRREARFQHPGKFFSMDHDCGRPLRGRAGAHSAGRGQEPVEKIGSDAASPSAYFLGLMGGRRRGEGRGEGGISRFEGPSSLDSTVAQPGDDVVERRKEKEGMGGRKSAEEEACEALLQEWVGRRKAGAEGEEGMEFEQGGRREGWSLSRGGVGEGGRGSGAGGAGREAIESGIIPPPPPLSVGPCVIEGGKDREREMLVGVGGGEGGEGGREEVDVLDEALEEDEALWA
Sbjct: 1 MAYTGSTQAEKGGEGGIDKRGGGLPWQPPPRFPGPLGLLGSRHPATSDQDSAGRTYRDLDKQERQQTQEPLNPPSGTGSNAVNVNLLPYFKQPRGAWHQMCEDYGLPVSGVVNAQDLRAVLGCTCAEVALGWQDEALRVGKKMAGVLAALNYTSDGSVSVTFADPTGRVQGYLHPDVIDEYGPDLCVGSVMVLSGAAILVSGPGVQRWLNVVPENVRGFYKAVGIEKSEMKKKNGGERVEIGGIMAVDGEEPGRPSGVRYGEEEEGLVAMGVEDTERGGGVGVDESVRPQSVSAHTPNPPASSWHGGGQAGEVHSGMRLSMGWATEDSRMQALAMLGPGVDGVGGEEGGEEGMEEGAEDVWEGEEKGMDLQEGTSWAREGAGEGLGGGPEGMPRREARFQHPGKFFSMDHDCGRPLRGRAGAHSAGRGQEPVEKIGSDAASPSAYFLGLMGGRRRGEGRGEGGISRFEGPSSLDSTVAQPGDDVVERRKEKEGMGGRKSAEEEACEALLQEWVGRRKAGAEGEEGMEFEQGGRREGWSLSRGGVGEGGRGSGAGGAGREAIESGIIPPPPPLSVGPCVIEGGKDREREMLVGVGGGEGGEGGREEVDVLDEALEEDEALWA 621
BLAST of EWM26354.1 vs. NCBI_GenBank
Match: gi|299115427|emb|CBN75592.1| (hypothetical protein Esi_0148_0028 [Ectocarpus siliculosus]) HSP 1 Score: 70.4774 bits (171), Expect = 2.812e-10 Identity = 43/132 (32.58%), Postives = 69/132 (52.27%), Query Frame = 0
Query: 94 RGAWHQMCEDYGLPVS--GVVNAQDLRAVL-GCTCAEVALGWQDEALRVGKKMAGVLAALNYTSDGSVSVTFADPTGRVQGYLHPDVIDEYGPDLCVGSVMVLSGAAILVSGPGVQRWLNVVPENVRGFYKA 222
+G W +C P++ G ++ ++A L G + + D LRV + V+ + S V V DP+GR++G+LHP ++E+GP L G+ ++L +I VSGPG R LNV P+ V + A
Sbjct: 52 KGPWLSLCSAIDAPIAEEGASGSKAVQAFLRGAVSPMLEVLAGDFDLRV-PVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPA 182 The following BLAST results are available for this feature:
BLAST of EWM26354.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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