EWM26378.1, cds4301 (CDS) Nannochloropsis gaditana

Overview
NameEWM26378.1
Unique Namecds4301
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:257387..261238 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26378.1
ProductExocyst complex, component Exoc1
Orig transcript idgnl|cribi|Naga_100031g23.2261.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:257387..261238 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR019160Exocyst_Exoc1/SEC3
Homology
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|585108388|gb|EWM26378.1| (Exocyst complex, component Exoc1 [Nannochloropsis gaditana])

HSP 1 Score: 2618.96 bits (6787), Expect = 0.000e+0
Identity = 1283/1283 (100.00%), Postives = 1283/1283 (100.00%), Query Frame = 0
Query:    1 MYRMDARQSIKRLLKGKPAPSYYKRLSHVRNKSSLVDVSGFNAGAGNMGRVNSGSYSPTGPMGDELNGLLGDDIHRDQLLRIVHKEVLDTPDEQEVLFLGAVHKGKASKYHIGGLVGAASGERSRYLCIALETGSRPHFEVKSLDSCQGQEDRGRDGPVSPSSSFSTPRSVSCAGSECFVVVYYFTMAAGAMGADVQVTVKSDVYLNDLSSVEYGPGTDFTLTFEQDGAPGNVAKPHYQLAALTQAFRDEIVWNILTIADVCCQVQPKTQGIDLHGLGLTASAQNFLSRNEALGRFLVIALDFEKEKWEESRVGGIARGKRGGDGAALPGVLMEAVWSSQARDQELEGLLDRFQWPTQTVEEIDGQLSERLKGLESDTMEVLLSWESAASRRPSTMTGAQDGGKGPDTASPAPPPLGPAAPGVDGEGEGYLSTLKLVEMLEELAQELAEVEAWLAGKGEALTRLQTDMQEIEEENNRLERQWKNFSRLNAVLQPLVQELSLDHAQESLLRDPVRFLDGGTGQLPPGEGAPEPGRPGGQKGGGMSASETSALVEEKVAVVVAAAQVLHRGLALLEGREVLGAEDRDGSRSPATGEDVMAFHKLSLSSSPTRTGNRPWEPVKVSVPPVPDGRSSSSSRSPLPPSQPASTPVAGVAPLKTIPRRLMDMTSLRSRSSYYADLRAVFLERVLAYLSSLFPACTPAGRLPNPVAPGHGGSRGNQTLAQELADAQRAFHTQLLDYEPLVEVVVGMLQGVPKGPGWMDGLLHRYSEAGSSGLYRPFLKAYFAELHAKTQTQGGTGNSGWFEGGVPAPSIFSNQTTASMAALPRAHINDFGSQGVVAFPPPSLRGNGSEPMFGHPKVSSSIPGAATSYYQQQACLLQQERTGGKGMGLTRSMAIDQACAELVPVVRREQHFIVELFKLQVDDSEDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGIAEAALQQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDVLVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEPPAILVRQLAQECRTQASK 1283
            MYRMDARQSIKRLLKGKPAPSYYKRLSHVRNKSSLVDVSGFNAGAGNMGRVNSGSYSPTGPMGDELNGLLGDDIHRDQLLRIVHKEVLDTPDEQEVLFLGAVHKGKASKYHIGGLVGAASGERSRYLCIALETGSRPHFEVKSLDSCQGQEDRGRDGPVSPSSSFSTPRSVSCAGSECFVVVYYFTMAAGAMGADVQVTVKSDVYLNDLSSVEYGPGTDFTLTFEQDGAPGNVAKPHYQLAALTQAFRDEIVWNILTIADVCCQVQPKTQGIDLHGLGLTASAQNFLSRNEALGRFLVIALDFEKEKWEESRVGGIARGKRGGDGAALPGVLMEAVWSSQARDQELEGLLDRFQWPTQTVEEIDGQLSERLKGLESDTMEVLLSWESAASRRPSTMTGAQDGGKGPDTASPAPPPLGPAAPGVDGEGEGYLSTLKLVEMLEELAQELAEVEAWLAGKGEALTRLQTDMQEIEEENNRLERQWKNFSRLNAVLQPLVQELSLDHAQESLLRDPVRFLDGGTGQLPPGEGAPEPGRPGGQKGGGMSASETSALVEEKVAVVVAAAQVLHRGLALLEGREVLGAEDRDGSRSPATGEDVMAFHKLSLSSSPTRTGNRPWEPVKVSVPPVPDGRSSSSSRSPLPPSQPASTPVAGVAPLKTIPRRLMDMTSLRSRSSYYADLRAVFLERVLAYLSSLFPACTPAGRLPNPVAPGHGGSRGNQTLAQELADAQRAFHTQLLDYEPLVEVVVGMLQGVPKGPGWMDGLLHRYSEAGSSGLYRPFLKAYFAELHAKTQTQGGTGNSGWFEGGVPAPSIFSNQTTASMAALPRAHINDFGSQGVVAFPPPSLRGNGSEPMFGHPKVSSSIPGAATSYYQQQACLLQQERTGGKGMGLTRSMAIDQACAELVPVVRREQHFIVELFKLQVDDSEDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGIAEAALQQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDVLVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEPPAILVRQLAQECRTQASK
Sbjct:    1 MYRMDARQSIKRLLKGKPAPSYYKRLSHVRNKSSLVDVSGFNAGAGNMGRVNSGSYSPTGPMGDELNGLLGDDIHRDQLLRIVHKEVLDTPDEQEVLFLGAVHKGKASKYHIGGLVGAASGERSRYLCIALETGSRPHFEVKSLDSCQGQEDRGRDGPVSPSSSFSTPRSVSCAGSECFVVVYYFTMAAGAMGADVQVTVKSDVYLNDLSSVEYGPGTDFTLTFEQDGAPGNVAKPHYQLAALTQAFRDEIVWNILTIADVCCQVQPKTQGIDLHGLGLTASAQNFLSRNEALGRFLVIALDFEKEKWEESRVGGIARGKRGGDGAALPGVLMEAVWSSQARDQELEGLLDRFQWPTQTVEEIDGQLSERLKGLESDTMEVLLSWESAASRRPSTMTGAQDGGKGPDTASPAPPPLGPAAPGVDGEGEGYLSTLKLVEMLEELAQELAEVEAWLAGKGEALTRLQTDMQEIEEENNRLERQWKNFSRLNAVLQPLVQELSLDHAQESLLRDPVRFLDGGTGQLPPGEGAPEPGRPGGQKGGGMSASETSALVEEKVAVVVAAAQVLHRGLALLEGREVLGAEDRDGSRSPATGEDVMAFHKLSLSSSPTRTGNRPWEPVKVSVPPVPDGRSSSSSRSPLPPSQPASTPVAGVAPLKTIPRRLMDMTSLRSRSSYYADLRAVFLERVLAYLSSLFPACTPAGRLPNPVAPGHGGSRGNQTLAQELADAQRAFHTQLLDYEPLVEVVVGMLQGVPKGPGWMDGLLHRYSEAGSSGLYRPFLKAYFAELHAKTQTQGGTGNSGWFEGGVPAPSIFSNQTTASMAALPRAHINDFGSQGVVAFPPPSLRGNGSEPMFGHPKVSSSIPGAATSYYQQQACLLQQERTGGKGMGLTRSMAIDQACAELVPVVRREQHFIVELFKLQVDDSEDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGIAEAALQQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDVLVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEPPAILVRQLAQECRTQASK 1283          
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|298713469|emb|CBJ27024.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 175.637 bits (444), Expect = 1.084e-40
Identity = 97/284 (34.15%), Postives = 146/284 (51.41%), Query Frame = 0
Query: 1008 MGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGI--------------AEAALQQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDVLVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEPPAILVRQLAQEC 1277
            +  A LVT      L +L+  +  L  +F  F+ DQ  WI  Q  D K+AG+LA  AK P  + RL  A    ++G               A+ A Q+L  +L   +E ++ R + KY  +VRLENYHFF  TM P     +   VL  +++QA    E +  RY  W +GY FP +T FF  ++DL++ VG  DV+ H PK  L    +     K I++ L+   +R+ KH++ +  L  PLW ++S  L+  F RYE++   CY   L+P A+ V++ A E 
Sbjct:  832 LKQAHLVT------LGILMEFKGLLMHRFGKFIKDQVSWIQAQRGDAKKAGILAAVAKAPTLLKRLQAASNAAVVGTRGNAKAKEQDEGGEAQKAYQRLVIALFEHVEEVASR-NPKYEHMVRLENYHFFAATMRP-----LKVQVLSEYVEQADKLEEVSTTRYLEWLVGYQFPVLTQFFAKVEDLVMTVGAADVTYHEPKRNLEATLKRQGDMKVISEGLKATHQRMVKHVTKEGQLLGPLWAKLSDTLFAMFSRYEELCTLCYQHTLDPGAVAVKRAATEI 1103          

HSP 2 Score: 81.6481 bits (200), Expect = 8.228e-12
Identity = 51/147 (34.69%), Postives = 74/147 (50.34%), Query Frame = 0
Query:  428 EGYLSTLKLVEMLEELAQELAEVEAWLAGKGEALTRLQTDMQEIEEENNRLERQWKNFSRLNAVLQPLVQELSLDHAQESLLRDPVRFLDGGTGQLPPGEGAPEPGRPGGQKGGGMSASETSALVEEKVAVVVAAAQVLHRGLALLE 574
            E    T  L+ ML+E+ Q+L  +E WL   G+ L  +Q DM EIE +NN+L+ QW+N+  L+  L+ LV+ +S+  + ES+LR+P   LD     L P +  P P                       V  VVAAA+ L   LA +E
Sbjct:  474 EKTAETETLISMLDEVDQQLQVMEGWLEQHGKPLEAMQVDMAEIERKNNKLDVQWRNYQNLHEYLKHLVEAISISPSNESMLRNPQVVLDAA---LNPSDEDPTPA----------------------VEKVVAAAESLSTALASIE 595          
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|223999053|ref|XP_002289199.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974407|gb|EED92736.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 135.576 bits (340), Expect = 3.054e-28
Identity = 136/593 (22.93%), Postives = 252/593 (42.50%), Query Frame = 0
Query:  712 GGSRGNQTLAQELADAQRAFHTQLLDYEPLVEVVVGMLQGVPKGPGWMDGLLHRYSEAGSSGLY-RPFLKAYFAELHAKTQTQGGTGNSGWFEGGVPAPSIFSNQTTASMAALPRAHINDFGSQGVVAFPPPSLR-GNGSEPMFGHPKVSSSIPGAATSYYQQQACLLQQERTGGKGMGLTRSMAIDQACAELVPVVRREQHFIVELFKL---QVDDSEDLRKLQSV---LEVEFDKLRDKLKEQAEAAMDAD----PIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDI----KRAGVLAPFAKFPIFVDR-LALAVGGQM---------IGIAEAALQQLSSSLLAWLERLSLR--GDQKYA-DVVRLENYHFFVQTMSPRQQCLIGSDVLVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEPPAILVRQLAQ 1275
            G    + ++A+++ + QR F   LL Y  ++E++  +L+     P  +  +   YSE  + G+  +  +KAYFA L  +T  +                   +++T  +  ALP    +   +  +  +PP  LR  N  EP+     V+                                   I+ A +E++P++ RE +F   LF L    +D  +  R  ++    ++      R  +      A + D     ++G A++++V  +                        E  D      +K   H++ +    +++   ++ L++ + +++ ++V +Q  WI   NP +    KRAGV A  ++FP ++D  L   V G+          I +    LQ+++SSL + L   + R   DQ+YA +V+R+EN +FF Q +  R   L  + +    I  A    + +   Y  W +   F  + + F +I  +   VG  DV IHVP+    +  Q+  S++ + + +   + R+ KH+SD  GL    W  +  +LY+ F R+E +   CY   LEP AI V +LA+
Sbjct:  912 GKGDNHSSIAKKIRETQRRFQASLLSYIKIIEIL-ALLK-----PDILPAVRDAYSELVAEGIMSKKRMKAYFASLPGRTSVK------------------LAHET--NFDALP-GRASATVTHDLSEYPPAQLRYSNAPEPVGIMKPVNVE--------------------------------DIEAALSEMLPLIAREAYFTAALFGLSSRHLDGRQKKRNFEAAKKSVDNSSQYFRYYMNRICGIASEVDAEGKKVKGDAMLSLVASI---------------------HLNEAMDGYIDRNKKGGDHSLSL----AYVRATILDLRKRVDKQWVSWVEEQIKWI-RTNPGVPLNGKRAGVFASISRFPSYLDHVLICCVAGRSNDYTPNLANIKVVSYYLQKMASSLFSSLNECAERETTDQQYASNVMRMENSYFFTQCIKQRGMEL--TSLFQKQITGASVICKQSTDAYLGWMIKREFKAMHSLFSNISRIRKDVGDADVPIHVPRAQFVRTLQKESSKEIMKEKIGVVYARMEKHLSDSGGLLPMAWKALVKVLYEWFGRWEKLSTSCYKFILEPSAIDVVRLAK 1417          
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|570960612|gb|ETP25591.1| (hypothetical protein F441_01546 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 130.954 bits (328), Expect = 5.279e-27
Identity = 96/380 (25.26%), Postives = 164/380 (43.16%), Query Frame = 0
Query:  895 IDQACAELVPVVRREQHFIVELFKLQVDDS-------EDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGIAEAAL-QQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDV-LVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEP 1265
            + QA   L P++ REQ  +  +F     D         +L  L  ++E  F+KL  ++ E  EAA   + ++ L++V +V G L                          +E R+              Q +F+  +++S Q  + +    F  DQE WIN QN D K AGVL P  K    + R+  +V G+       ++   +  S + W+++++     KYA + RLENY F    +   +      D+ L  +  +AQ  Y   +QRY +    YAF ++     SI+ L+V V   ++  H+P+  + ++     S  A   S+R    RL+KH  ++S +   +W ++      R   Y  V   CY ++ EP
Sbjct:  611 MQQALDHLTPLILREQRLVTRVFFPATSDKTSYTGGKHELEDLTLMMENVFEKLLKRMNEFGEAAASRNILDALSLVVLVNGKL--------------------------EEFRQ--------------QSAFLYNVMVSFQLQMKRMLIKFTEDQEAWINAQNVDTKMAGVLGPTKKIVNMIARMEESVAGKSTDSTLVSIYNMIIPSTMHWIDKVA-DTRAKYAALTRLENYLFLSDNL---KTINASKDLPLAQYAAEAQERYTENLQRYVASVWEYAFKQLVPMIASIESLMVTVPAAEIQYHLPRQEVRRVLDSTSS--AFEKSVRVMHDRLKKHFRENSKILPSVWKQVIAYGSSRMAVYALVAGDCYQLRFEP 944          
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|566032887|gb|ETI55798.1| (hypothetical protein F443_01575 [Phytophthora parasitica P1569] >gi|567970554|gb|ETK95582.1| hypothetical protein L915_01503 [Phytophthora parasitica] >gi|568058677|gb|ETM55289.1| hypothetical protein L914_01486 [Phytophthora parasitica])

HSP 1 Score: 130.954 bits (328), Expect = 5.463e-27
Identity = 96/380 (25.26%), Postives = 164/380 (43.16%), Query Frame = 0
Query:  895 IDQACAELVPVVRREQHFIVELFKLQVDDS-------EDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGIAEAAL-QQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDV-LVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEP 1265
            + QA   L P++ REQ  +  +F     D         +L  L  ++E  F+KL  ++ E  EAA   + ++ L++V +V G L                          +E R+              Q +F+  +++S Q  + +    F  DQE WIN QN D K AGVL P  K    + R+  +V G+       ++   +  S + W+++++     KYA + RLENY F    +   +      D+ L  +  +AQ  Y   +QRY +    YAF ++     SI+ L+V V   ++  H+P+  + ++     S  A   S+R    RL+KH  ++S +   +W ++      R   Y  V   CY ++ EP
Sbjct:  611 MQQALDHLTPLILREQRLVTRVFFPATSDKTSYTGGKHELEDLTLMMENVFEKLLKRMNEFGEAAASRNILDALSLVVLVNGKL--------------------------EEFRQ--------------QSAFLYNVMVSFQLQMKRMLIKFTEDQEAWINAQNVDTKMAGVLGPTKKIVNMIARMEESVAGKSTDSTLVSIYNMIIPSTMHWIDKVA-DTRAKYAALTRLENYLFLSDNL---KTINASKDLPLAQYAAEAQERYTENLQRYVASVWEYAFKQLVPMIASIESLMVTVPAAEIQYHLPRQEVRRVLDSTSS--AFEKSVRVMHDRLKKHFRENSKILPSVWKQVIAYGSSRMAVYALVAGDCYQLRFEP 944          
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|675180249|ref|XP_008899009.1| (hypothetical protein PPTG_06719 [Phytophthora parasitica INRA-310] >gi|568100760|gb|ETN15450.1| hypothetical protein PPTG_06719 [Phytophthora parasitica INRA-310] >gi|570997167|gb|ETP53611.1| hypothetical protein F442_01524 [Phytophthora parasitica P10297])

HSP 1 Score: 130.568 bits (327), Expect = 5.557e-27
Identity = 96/380 (25.26%), Postives = 164/380 (43.16%), Query Frame = 0
Query:  895 IDQACAELVPVVRREQHFIVELFKLQVDDS-------EDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGIAEAAL-QQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDV-LVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEP 1265
            + QA   L P++ REQ  +  +F     D         +L  L  ++E  F+KL  ++ E  EAA   + ++ L++V +V G L                          +E R+              Q +F+  +++S Q  + +    F  DQE WIN QN D K AGVL P  K    + R+  +V G+       ++   +  S + W+++++     KYA + RLENY F    +   +      D+ L  +  +AQ  Y   +QRY +    YAF ++     SI+ L+V V   ++  H+P+  + ++     S  A   S+R    RL+KH  ++S +   +W ++      R   Y  V   CY ++ EP
Sbjct:  611 MQQALDHLTPLILREQRLVTRVFFPATSDKTSYTGGKHELEDLTLMMENVFEKLLKRMNEFGEAAASRNILDALSLVVLVNGKL--------------------------EEFRQ--------------QSAFLYNVMVSFQLQMKRMLIKFTEDQEAWINAQNVDTKMAGVLGPTKKIVNMIARMEESVAGKSTDSTLVSIYNMIIPSTMHWIDKVA-DTRAKYAALTRLENYLFLSDNL---KTINASKDLPLAQYAAEAQERYTENLQRYVASVWEYAFKQLVPMIASIESLMVTVPAAEIQYHLPRQEVRRVLDSTSS--AFEKSVRVMHDRLKKHFRENSKILPSVWKQVIAYGSSRMAVYALVAGDCYQLRFEP 944          
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|568028089|gb|ETM02032.1| (hypothetical protein L917_01457 [Phytophthora parasitica])

HSP 1 Score: 130.568 bits (327), Expect = 6.266e-27
Identity = 96/380 (25.26%), Postives = 164/380 (43.16%), Query Frame = 0
Query:  895 IDQACAELVPVVRREQHFIVELFKLQVDDS-------EDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGIAEAAL-QQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDV-LVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEP 1265
            + QA   L P++ REQ  +  +F     D         +L  L  ++E  F+KL  ++ E  EAA   + ++ L++V +V G L                          +E R+              Q +F+  +++S Q  + +    F  DQE WIN QN D K AGVL P  K    + R+  +V G+       ++   +  S + W+++++     KYA + RLENY F    +   +      D+ L  +  +AQ  Y   +QRY +    YAF ++     SI+ L+V V   ++  H+P+  + ++     S  A   S+R    RL+KH  ++S +   +W ++      R   Y  V   CY ++ EP
Sbjct:  611 MQQALDHLTPLILREQRLVTRVFFPATSDKTSYTGGKHELEDLTLMMENVFEKLLKRMNEFGEAAASRNILDALSLVVLVNGKL--------------------------EEFRQ--------------QSAFLYNVMVSFQLQMKRMLIKFTEDQEAWINAQNVDTKMAGVLGPTKKIVNMIARMEESVAGKSTDSTLVSIYNMIIPSTMHWIDKVA-DTRAKYAALTRLENYLFLSDNL---KTINASKDLPLAQYAAEAQERYTENLQRYVASVWEYAFKQLVPMIASIESLMVTVPAAEIQYHLPRQEVRRVLDSTSS--AFEKSVRVMHDRLKKHFRENSKILPSVWKQVIAYGSSRMAVYALVAGDCYQLRFEP 944          
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|570336596|gb|ETO84544.1| (hypothetical protein F444_01575 [Phytophthora parasitica P1976])

HSP 1 Score: 130.183 bits (326), Expect = 7.967e-27
Identity = 96/380 (25.26%), Postives = 164/380 (43.16%), Query Frame = 0
Query:  895 IDQACAELVPVVRREQHFIVELFKLQVDDS-------EDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGIAEAAL-QQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDV-LVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEP 1265
            + QA   L P++ REQ  +  +F     D         +L  L  ++E  F+KL  ++ E  EAA   + ++ L++V +V G L                          +E R+              Q +F+  +++S Q  + +    F  DQE WIN QN D K AGVL P  K    + R+  +V G+       ++   +  S + W+++++     KYA + RLENY F    +   +      D+ L  +  +AQ  Y   +QRY +    YAF ++     SI+ L+V V   ++  H+P+  + ++     S  A   S+R    RL+KH  ++S +   +W ++      R   Y  V   CY ++ EP
Sbjct:  611 MQQALDHLTPLILREQRLVTRVFFPATSDKTSYTGGKHELEDLTLMMENVFEKLLKRMNEFGEAAASRNILDALSLVVLVNGKL--------------------------EEFRQ--------------QSAFLYNVMVSFQLQMKRMLIKFTEDQEAWINAQNVDTKMAGVLGPTKKIVNMIARMEESVAGKSTDSTLVSIYNMIIPSTMHWIDKVA-DTRAKYAALTRLENYLFLSDNL---KTINASKDLPLAQYAAEAQERYTENLQRYVASVWEYAFKQLVPMIASIESLMVTVPAAEIQYHLPRQEVRRVLDSTSS--AFEKSVRVMHDRLKKHFRENSKILPSVWKQVIAYGSSRMAVYALVAGDCYQLRFEP 944          
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|567998919|gb|ETL48975.1| (hypothetical protein L916_01475, partial [Phytophthora parasitica])

HSP 1 Score: 129.028 bits (323), Expect = 1.889e-26
Identity = 96/380 (25.26%), Postives = 164/380 (43.16%), Query Frame = 0
Query:  895 IDQACAELVPVVRREQHFIVELFKLQVDDS-------EDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGPRASYQGGNVAGRREQEDEGRKPTRKAMGHAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDIKRAGVLAPFAKFPIFVDRLALAVGGQMIGIAEAAL-QQLSSSLLAWLERLSLRGDQKYADVVRLENYHFFVQTMSPRQQCLIGSDV-LVSFIDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEP 1265
            + QA   L P++ REQ  +  +F     D         +L  L  ++E  F+KL  ++ E  EAA   + ++ L++V +V G L                          +E R+              Q +F+  +++S Q  + +    F  DQE WIN QN D K AGVL P  K    + R+  +V G+       ++   +  S + W+++++     KYA + RLENY F    +   +      D+ L  +  +AQ  Y   +QRY +    YAF ++     SI+ L+V V   ++  H+P+  + ++     S  A   S+R    RL+KH  ++S +   +W ++      R   Y  V   CY ++ EP
Sbjct:  563 MQQALDHLTPLILREQRLVTRVFFPATSDKTSYTGGKHELEDLTLMMENVFEKLLKRMNEFGEAAASRNILDALSLVVLVNGKL--------------------------EEFRQ--------------QSAFLYNVMVSFQLQMKRMLIKFTEDQEAWINAQNVDTKMAGVLGPTKKIVNMIARMEESVAGKSTDSTLVSIYNMIIPSTMHWIDKVA-DTRAKYAALTRLENYLFLSDNL---KTINASKDLPLAQYAAEAQERYTENLQRYVASVWEYAFKQLVPMIASIESLMVTVPAAEIQYHLPRQEVRRVLDSTSS--AFEKSVRVMHDRLKKHFRENSKILPSVWKQVIAYGSSRMAVYALVAGDCYQLRFEP 896          
BLAST of EWM26378.1 vs. NCBI_GenBank
Match: gi|1072235719|gb|OEU20447.1| (hypothetical protein FRACYDRAFT_234073 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 123.635 bits (309), Expect = 1.240e-24
Identity = 111/441 (25.17%), Postives = 201/441 (45.58%), Query Frame = 0
Query:  861 SIPGAATSYYQQQACLLQQE---RTGGKGMGLTRSMAIDQACAELVPVVRREQHFIVELFKLQVDDSEDLRKLQSVLEVEFDKLRDKLKEQAEAAMDADPIEGLAVVAVVTGLLGPKPGSPSGP-RASYQGGNVAGRREQEDEGRKPTRKAMG--HAMLVTSQDSFMLELLISLQRSLGQKFHTFVADQEVWINHQNPDI----KRAGVLAPFAKFPIFVDRLALAV----------GGQMIGIAEAALQQLSSSLLAWLERLSLR--GDQKYAD-VVRLENYHFFVQTMSPRQQCLIGSDVLVSF---IDQAQAAYEAAVQRYASWSLGYAFPEVTAFFGSIDDLIVKVGVGDVSIHVPKTALFKLTQEACSRKAIADSLRTAFRRLRKHISDDSGLFLPLWDRISLLLYQRFVRYEDVILQCYDVKLEPPAILVRQLAQ 1275
            ++PG  ++Y    A  L+       G K M +  +  I  A +EL+PVV RE +F   LF L     +   K ++              E A+ ++D         +    G++      P+   RA      VA     E       R+  G  H++ +    +++   ++ L++ + +++  +V  Q  WI   NP +    KRAG+ A FA+FP ++D + L                I +    LQ+++++LL  L   S +   DQ+YA  V+++EN +FF Q++  R     GS++   F   I +A +  +++   Y  W +   F  + A F +I  +  +VG  DV +HVPK    +   +  +R+ + + +   + R+ KH+S++ GL    W  +  +LY+ F R+E +  Q Y   LEP A+ V ++A+
Sbjct:  837 ALPGKNSAYLNNAAKDLKNYSPYEPGSKEMTVN-AEDIKYALSELLPVVAREAYFTAALFGLSSKAKDGREKKRNF-------------EAAKKSVDHSTQYFRYYIQRTCGIVEDGEKDPNMRLRADPMLSLVASIHLNEAMENYIDREKKGGDHSLSL----AYVRATILDLRKKVDKQWVAWVEQQIEWI-RSNPGVPSNGKRAGIYAAFARFPCYIDHILLCCREGRTDNFTPNLANIKVVSYYLQKIATALLESLRICSEQETTDQQYASSVMQMENSYFFTQSLKNR-----GSEITALFQKQILKANSVCKSSTDAYLGWMIKREFKSLHALFSNISKIRREVGDRDVPMHVPKATFIRTLTKESNRETMKEKIAIIYSRMEKHLSEEGGLLPVAWKALVKVLYEWFGRWEKLSSQIYKHVLEPSAVDVVRIAK 1253          

HSP 2 Score: 65.4698 bits (158), Expect = 7.141e-7
Identity = 56/200 (28.00%), Postives = 89/200 (44.50%), Query Frame = 0
Query:  367 LSERLKGLESDTMEVLLSWESAASRRPSTMTGAQDGGKGPDTASPAPPPLGPAAPGVDGEGEGYLSTLKLVEMLEELAQELAEVEAWLAGKGEALTRLQTDMQEIEEENNRLERQWKNFSRLNAVLQPLVQELSLDHAQESLLRDPVRFL---DGGTGQLPPGEG----------APEPGRPGGQKGGGMSASETSALVE 553
            L  R++ LE++T   L++WE     +  ++TG                  G  A   + +    LS   L   LE L +EL E+E WL  +  A+  L  D ++IEEEN +LE+QWK++  L + ++ L++ L +D   E +L +P   L   D G  Q+   E           A +      +K GG+     S  VE
Sbjct:  551 LQRRMRDLEAETCRRLIAWED---EKHLSVTGQA----------------GLFAQTANRDTVDALSLAHLFTTLESLDRELIEMEDWLDDRVLAIKPLTDDCRDIEEENRQLEQQWKSYDLLGSEMRRLLKGLVIDEDLELILGNPASALVYDDAGNIQVEESEDGVDRVYDAGKALQEATEHAEKAGGLHLRAVSERVE 731          
The following BLAST results are available for this feature:
BLAST of EWM26378.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108388|gb|EWM26378.1|0.000e+0100.00Exocyst complex, component Exoc1 [Nannochloropsis ... [more]
gi|298713469|emb|CBJ27024.1|1.084e-4034.15conserved unknown protein [Ectocarpus siliculosus][more]
gi|223999053|ref|XP_002289199.1|3.054e-2822.93predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|570960612|gb|ETP25591.1|5.279e-2725.26hypothetical protein F441_01546 [Phytophthora para... [more]
gi|566032887|gb|ETI55798.1|5.463e-2725.26hypothetical protein F443_01575 [Phytophthora para... [more]
gi|675180249|ref|XP_008899009.1|5.557e-2725.26hypothetical protein PPTG_06719 [Phytophthora para... [more]
gi|568028089|gb|ETM02032.1|6.266e-2725.26hypothetical protein L917_01457 [Phytophthora para... [more]
gi|570336596|gb|ETO84544.1|7.967e-2725.26hypothetical protein F444_01575 [Phytophthora para... [more]
gi|567998919|gb|ETL48975.1|1.889e-2625.26hypothetical protein L916_01475, partial [Phytopht... [more]
gi|1072235719|gb|OEU20447.1|1.240e-2425.17hypothetical protein FRACYDRAFT_234073 [Fragilario... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4311rna4311Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications