EWM30630.1, cds43 (CDS) Nannochloropsis gaditana

Overview
NameEWM30630.1
Unique Namecds43
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:123156..123305 -
Alignment locationCM002455.1:122920..123037 -
Alignment locationCM002455.1:122696..122757 -
Alignment locationCM002455.1:122041..122279 -

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Properties
Property NameValue
Start range122041
Start range.
Protein idEWM30630.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100806g1.1300.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:123156..123305 -
CM002455.1supercontigCM002455.1:122920..123037 -
CM002455.1supercontigCM002455.1:122696..122757 -
CM002455.1supercontigCM002455.1:122041..122279 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30630.1 vs. NCBI_GenBank
Match: gi|585113310|gb|EWM30630.1| (hypothetical protein Naga_100806g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 372.474 bits (955), Expect = 2.403e-130
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 
Query:    1 MPLQPLSSLARPAQETGDSQSFLPTSPSSLSSSPSPFRKRRTGFGRFEISKHLHAYRHGKLSKEELCSYLKIHRHDLLVEDAGEGNIVHGLIRKGHTRALLQVVLPNIPEVVLALERSRAGDGQSGVTLLRRAVERKDRAVVEGIVKVGREGENEGGREGGRVETNSGRRVCRQARLRGGREGGREEGR 189
            MPLQPLSSLARPAQETGDSQSFLPTSPSSLSSSPSPFRKRRTGFGRFEISKHLHAYRHGKLSKEELCSYLKIHRHDLLVEDAGEGNIVHGLIRKGHTRALLQVVLPNIPEVVLALERSRAGDGQSGVTLLRRAVERKDRAVVEGIVKVGREGENEGGREGGRVETNSGRRVCRQARLRGGREGGREEGR
Sbjct:    1 MPLQPLSSLARPAQETGDSQSFLPTSPSSLSSSPSPFRKRRTGFGRFEISKHLHAYRHGKLSKEELCSYLKIHRHDLLVEDAGEGNIVHGLIRKGHTRALLQVVLPNIPEVVLALERSRAGDGQSGVTLLRRAVERKDRAVVEGIVKVGREGENEGGREGGRVETNSGRRVCRQARLRGGREGGREEGR 189
The following BLAST results are available for this feature:
BLAST of EWM30630.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113310|gb|EWM30630.1|2.403e-130100.00hypothetical protein Naga_100806g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna43rna43Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications