EWM26360.1, cds4296 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|585108370|gb|EWM26360.1| (atp-dependent rna helicase ddx55 [Nannochloropsis gaditana]) HSP 1 Score: 1467.21 bits (3797), Expect = 0.000e+0 Identity = 718/718 (100.00%), Postives = 718/718 (100.00%), Query Frame = 0
Query: 1 MTASSPDGDNSPHRLAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAARKMRLAEAARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKELRRRGSDEEGEGEASNEDAAHVSAASGSDSDGGGNESDAEQGAQSATLNGMRMSARPNGQTRPPPQLSKKQGKFAQNNKMKQKQKQSRRGWVSRK 718
MTASSPDGDNSPHRLAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAARKMRLAEAARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKELRRRGSDEEGEGEASNEDAAHVSAASGSDSDGGGNESDAEQGAQSATLNGMRMSARPNGQTRPPPQLSKKQGKFAQNNKMKQKQKQSRRGWVSRK
Sbjct: 1 MTASSPDGDNSPHRLAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAARKMRLAEAARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKELRRRGSDEEGEGEASNEDAAHVSAASGSDSDGGGNESDAEQGAQSATLNGMRMSARPNGQTRPPPQLSKKQGKFAQNNKMKQKQKQSRRGWVSRK 718
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|224001628|ref|XP_002290486.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973908|gb|EED92238.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 538.11 bits (1385), Expect = 0.000e+0 Identity = 293/618 (47.41%), Postives = 402/618 (65.05%), Query Frame = 0
Query: 17 FQAMIPSLHERTLAAVA--ALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDI--VGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLA-RAGMRNPATVAVQV---VNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWA--TDTRSIEYQDKKREAARKMRLAE--AARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEK 622
F ++ P L L + NF TPVQ++TIPLFLT+ DV V AVTGSGKTLAF+IP VEMILRR LK H+VGA+++ PTRELA+Q V C G+ PLLLVGG + V + ++F + +DI++GTPGR+ DVL R+ + I V ELEVLILDE+D LL+MGF+ TLT+IL LP+ RRTGLFSAT T V++L ++GMRNP V V V V + QATP +L N+ + + +EKL RLL+FL++H +KV+VFF+TCA V+Y++ +L K+ K+ +G LHGK+VQK+R+ + RF + G LLCTDVAARGLD+ DV W +Q++ P DPS ++HRVGR+ARAGRVG+SL FL EE YV+FLRL+ VP+ LE+DEV + V+ ++ L L+DR+VLE+GT+A+T+++RAYKEH C FIFRFA LDLG LA ++ LLRLPKMPEL ++FQ + +I + DK REAAR+ RLA AA ++ + +A R R R K + + + R K++G+ +I +EW+EL +EERL+K+LR KI++EEY++
Sbjct: 1 FTSINPPLSPSILTFLTKPPYNFPTPTPVQSTTIPLFLTHHDVFVRAVTGSGKTLAFLIPVVEMILRRTVLLKGHQVGALVLEPTRELARQTFSVCRDLCGECGMNEPLLLVGGASVSAVAHDLQQFQKLKSDIVIGTPGRVEDVLTRFDN-IDVSELEVLILDESDVLLDMGFEVTLTSILSRLPRMRRTGLFSATNTSGVKKLCVKSGMRNPVVVDVAVSAIVKSKGNSQQATPSSLTNY-YIISPLDEKLSRLLSFLTQHSNEKVIVFFLTCACVEYYSSVL-------------------KELKL-PCKGYEYEALHGKLVQKRREKAMERFREKTE--GSALLCTDVAARGLDISDVSWTIQFDAPVDPSSYVHRVGRSARAGRVGKSLVFLTRKEEAYVDFLRLRKVPVRELEDDEVS--GSNVFVPDVLPSIRKLVLKDRDVLEKGTKAYTSYIRAYKEHHCGFIFRFASLDLGVLATSFSLLRLPKMPELRDKLGKLNFQAAGPEINIHAIPFLDKTREAARQKRLAAELAAGGKNAKQIKAEERAAERIRKQKERRQAEIA----KGRNPNKKRGRQARIFDEWDELAKEERLYKKLRTNKITKEEYDR 588
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|298714126|emb|CBJ27307.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 531.946 bits (1369), Expect = 7.649e-178 Identity = 293/590 (49.66%), Postives = 386/590 (65.42%), Query Frame = 0
Query: 48 IPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQT---------REVQATPQTLLNFHWTCARPEEKLGRLLAFL-SRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQ-EWATDTRSIEYQDKKREAARKMRLAEAARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKELRR 626
+PLF+ NKDVCVEAVTGSGKTLAFV+PA+EMILRR+ LK+++VGAII++PTRELA QI V + F PLLLVGGT V + F + GA ILVGTPGR+ D+L Y + RELE L+LDEADTLL+MGF TL +I LPKQRRTGLFSATQTRE + LARAG+RNPATV+V V ++ ++ QATP +L NF+ C PEEKL +L+ FL +R +K +VF TCA VD+F++ L+Q P+ + + G RV LHG+MVQK+R A +G VAARG+D+PDV WIVQ++PPQDPS+F+HRVGRTARAG+ GRSLT L AE+ Y+ FL + VPL +E +E ++E VK + DR+VLE+GT+AF +FVR YKEHQC FIFRF LDL A+ARA+ LLRLPK+ ELS+ +A F+ E D +I+Y DK RE AR+ +L E ++ + + R G+ G+E+ ++KRKG+HQQ++EEW++L EERL+K+LR +K++REEY+ ELR+
Sbjct: 1 MPLFMCNKDVCVEAVTGSGKTLAFVVPAIEMILRREVDLKRNQVGAIILTPTRELANQIFGVVSKFSEALDEAKPLLLVGGTS-VEECLAAFRKGGASILVGTPGRVEDMLNNY-NVFDTRELEALVLDEADTLLDMGFAGTLNSIFSLLPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKSGGAGAGGVPGQKTQATPSSLENFYIVC-EPEEKLAQLVGFLKARPEGEKTIVFLSTCAGVDFFSKTLSQLPSVKAL-------------------GLRVESLHGRMVQKRR--------TAVKDG-------HVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFTSVNASE------ILEEVKGMVKTDRDVLEKGTKAFISFVRGYKEHQCSFIFRFNDLDLAAVARAFCLLRLPKIAELSNPAVAESFEKEKTVDFTAIKYADKAREKARQKQLVR-QDEENKQRAIEEEEEARRAEKELAAGGGKNNASGKEEGGKRKRKGRHQQLLEEWDDLANEERLYKKLRNKKLTREEYDHELRK 546
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|695376720|ref|XP_009515846.1| (hypothetical protein PHYSODRAFT_309392 [Phytophthora sojae] >gi|348688757|gb|EGZ28571.1| hypothetical protein PHYSODRAFT_309392 [Phytophthora sojae]) HSP 1 Score: 510.76 bits (1314), Expect = 1.512e-169 Identity = 298/625 (47.68%), Postives = 406/625 (64.96%), Query Frame = 0
Query: 15 LAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGA-----------IIISPTRELAKQILKVTTHFCSHTGLRPPLLL-VGGTDIVGD-NFKRFSQDGADILVGTPGRLHDVLER-YGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAARKMRLAEAARER-DRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKEL 624
+ F P+L LA AL F MTPVQA+T+PLFL+NKDVCV+A TGSGKTLAFV+P V+++ K+ L + A ++ISPTRELA+QI + F +H LLL VGGT + D + R + +++GTPGR D+L R G ++ RE E+LILDEADTLL+MGF+ +L IL+HLPKQRRTGLFSATQT+EV+ LARAG+RNPAT++VQV N Q TP TL N++ +++L L F+ + +K++VFF TC +VD+FAR+L + F+ G + V LHGKM QKKR F+ S G+L+CTDV ARG+D+PDVDWIVQY+PPQDP+FF+HRVGRTARAGR G +L+FL E+ YV FL+++ VP +E+ LP + V+ VK+ L DR++LE+GT+AF AFVR+YKEHQCQFIFRF +LDLGA+AR + LL+LPK+ EL + + ++F++ T I+++DK RE R+ +LA A+E +R K+ A R+ R R EEE + + R+R+K+KG HQQIVEEW+EL EE+L+K+L++ KI+ EEYE L
Sbjct: 1 MRFHDFQPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLL---KTKLADGSITAPRHADVTKLVAMVISPTRELARQIFECAEKFVAHALPSVQLLLFVGGTSVDEDLSLIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVANN----TQVTPSTLQNYYCLVGH-DQRLSALHNFVHSKKGEKLIVFFSTCGSVDFFARVLEE--LFK------------------GTKDMPVVALHGKMPQKKRTTNYDLFSSLKS---GLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPC-----EEMTLPLD--TMEDVLPKVKSFILEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRN--VRINFEKTDIKTTDIKFKDKAREKERQKKLAAIAKENEEREKKNAEMREKKRKRP--LEEENQ-----KHPRRREKKKGLHQQIVEEWDELAEEEQLYKKLKKGKITEEEYEMAL 578
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|1072230833|gb|OEU15566.1| (P-loop containing nucleoside triphosphate hydrolase protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 508.449 bits (1308), Expect = 3.696e-168 Identity = 298/683 (43.63%), Postives = 423/683 (61.93%), Query Frame = 0
Query: 12 PHRLAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDI----------VGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLL--NMGFKATLTAILDHLPKQRRTGLFSATQT----REVRQLA-RAGMRNPATVAVQV-VNQQTREVQA---TPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGT-------DQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAAL---EEDEVRLP-NEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWA---TDTRSIEYQDKKREAARKMR----LAEAARERDRVK-EQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKELRRRGSDEEGEGEASNEDAAHVSAASGSDSD 654
P + +F+ + P L + L + + NF MTPVQ +TIPLFL NKDV V+AVTGSGKT+AF++P V+ I +R +PL KH++GA+I+SPTRELA Q V + C + PPLLLVGG V ++ K F ++ DI++GTPGR+ D+L RY + + V ELE+LILDEAD LL T+ +IL+ LPK RRTG+FSAT T + V+ L RAGMRNP + VQV N+++R V + TP +L N+ + + EEK+ RL AFL HR +K +VFF+TCA VD++ AF+ +L + D+GE N + + G + +LHGK++QKKR+ + RF + S+ G VL TDVAARGLDV D+DW+VQ + PQDPS F+HRVGR+ARAGR+G SL FL E EE YV+ L + V + L E+D+ P N++ + ++ + L+DR+ LE+GT+AFT+++RAYKEH C+FIFRFA LDLG LA ++ LLRLPKMPEL + + A D I + DK RE R+ R LA + ++K EQ +V+R + E V+ G R K++G++ QIV+EWEEL +EERL+K+ R+ KI++E+YE+ + G + +++ +V+A S SD
Sbjct: 30 PKKGSFRNIQPPLTQGILDFLDSKNFHTMTPVQEATIPLFLQNKDVAVQAVTGSGKTIAFLVPTVQRIRQRLTPLLKHQIGALILSPTRELALQTWTVCSELCEAVQMAPPLLLVGGGRSGKSGGLNHRPVTEDLKTFHRESNDIIIGTPGRMDDILTRY-NVLDVTELEILILDEADVLLFGRTVIDPTIASILNRLPKMRRTGIFSATTTFTSNKSVKPLLQRAGMRNPVLINVQVAANEKSRPVLSTTYTPTSLTNY-YLVTKLEEKICRLAAFLQSHRHEKTIVFFLTCACVDFYG------TAFQHLLDSTKSNKSNDKGEDNDAQDQ----DGLTIELLHGKLLQKKREKAMVRFRE--SKSGAVLFATDVAARGLDVTDIDWVVQVDAPQDPSQFVHRVGRSARAGRLGSSLLFLTEKEESYVDLLANRQVSMQELPEREKDDTMTPINDNGNIIPFLPKIRGIVLKDRDFLEKGTKAFTSYIRAYKEHVCRFIFRFASLDLGHLATSFCLLRLPKMPELREFNGKLKYFLSAGPEVDIYKIPFLDKARETTRQKRLAVELAAGGKNAKQIKAEQKKADQVMRSK----ERRKVAVDKG---RNPDKKRGRNAQIVDEWEELAKEERLYKKFRRGKITKEQYEELMF-------GSLKTNDDTPKNVAAEQESSSD 684
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|156384956|ref|XP_001633398.1| (predicted protein [Nematostella vectensis] >gi|156220467|gb|EDO41335.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 502.671 bits (1293), Expect = 2.527e-167 Identity = 279/616 (45.29%), Postives = 381/616 (61.85%), Query Frame = 0
Query: 22 PSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIG----VRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRL-KGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVD-FQEWATDTRSIEYQDKKREAARKMRL-------AEAARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKEL 624
PSL + TL ++ +NF+ MTPVQA+ IPLF++NKDV VEAVTGSGKTLAFVIP +E+ILRR+ LKKHE+GA+II+PTRELA+QI +V + LLL+GG D D K F +GA+I++GTPGRL D L R I ++ LEVL+LDEAD LL+MGF+A++ IL +LPKQRRTGLFSATQT EV L RAG+RNP V V+ +T+ VQ TP TL NF+ C R EK +L+AFL ++KK MVFF TCA V+YF++ LT+ L + LHGKM + R + F + S G+L+CTDV ARG+D+P+V+W++QY+PP + F+HR GRTAR G G ++ FLL E+ YV+F+ + + VPL ALE P++D + +K LA +DR++ E+GT+AF +FV+AYK+H+C IFRF +LDLG LA +GLLRLP MPEL + +D F D I YQ+K RE R+ R+ E ++ R KE A + +E ++ + R+ +RK KH+ + +EL E RL K+L+Q KIS E++ +E
Sbjct: 10 PSLSQTTLNSMKKMNFSTMTPVQAAAIPLFMSNKDVAVEAVTGSGKTLAFVIPIIEIILRREDKLKKHEIGALIITPTRELAQQIDEVVSTLVEDIPNIRRLLLIGGADPNAD-LKAFKYEGANIIIGTPGRLEDFLARQQDGINLASHLKSLEVLVLDEADRLLDMGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVREKLTKTKNVQRTPSTLQNFYLIC-RSHEKFSQLVAFLKARKDKKNMVFFSTCACVNYFSKALTKF-----------------------LPNVHIMALHGKM-KSNRHKIFDSFRKLES---GILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRCGRTARIGNEGNAVVFLLPTEDSYVDFISINQKVPLQALE------PDKD--APNITAKLKKLATKDRDLFEKGTKAFVSFVQAYKKHECSLIFRFKELDLGLLAEGFGLLRLPSMPEL--RGVTIDSFTPHDIDYDKIRYQEKAREKQRQKRIQALVESGGEGVAKKKRKKETVAWSR---------NKERQIKREKRRARREFQRKQKHKFDQNDLDELASEARLVKKLKQGKISSEQFNEEF 577
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|1173934110|gb|OQR85585.1| (DEAD/DEAH box RNA helicase [Achlya hypogyna]) HSP 1 Score: 503.056 bits (1294), Expect = 1.615e-166 Identity = 293/628 (46.66%), Postives = 391/628 (62.26%), Query Frame = 0
Query: 15 LAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPL----------KKH--EVGAIIISPTRELAKQILKVTTHFCSHTGLRPP---LLLVGGTDIVGDNFK-RFSQDGADILVGTPGRLHDVLERYGHA--IGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAARKMRLAEAARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKEL 624
+ F P L LA VA FT MTPVQA+TIPLFLTNKDV V+A TGSGKTL+FV+P VEM+ RR KK ++ A+++SPTRELA+QI + F S P +L VGGT + D R ++ ++VGTPGR+ D+L R + +E E LILDEADTLL+MGF+ ++TAIL LPKQRRTGLFSATQT+EV+ LARAG+RNPATV+VQ+ Q TP TL N++ + KL L+ F++ +K +VFF TCA+VD++ ++L VL L + V LHGKM KKR F ++ G+L+CTDV ARG+D+PDVDWIVQ++PPQDPSFF+HRVGRTARAGR G +LTFL E+ YV FLR++ VP+A ++E L +D T V+ VKAL L DR+++E+GT+AF +F+R+YKEHQCQFIFRF LDL +A + L +LPK+ EL ++ F+ I Y+DK RE R+ +LA A + K + +K+ K E E + E R+R+K+KG+HQQIVEEW+EL REERL+K+ ++ KIS+ EYE+ L
Sbjct: 1 MKFAECTPPLCAEVLAGVAEKGFTDMTPVQAATIPLFLTNKDVAVDASTGSGKTLSFVLPIVEMLRRRAQATGNDDAANIATKKQVTQLMAMVLSPTRELARQIHECACFFFSRA--LPSVQVILFVGGTSVDEDMASIRAAKGRMSVIVGTPGRIDDILNRVAPMGILETKEFEALILDEADTLLDMGFEQSITAILGRLPKQRRTGLFSATQTQEVKALARAGLRNPATVSVQLAVDQK-----TPTTLTNWYAE-VEYDAKLAALVQFVAARPSEKCIVFFSTCASVDFYGKVL-------EVL----------------LPEAAVVSLHGKMAPKKRVLCYESFE---AQTAGLLVCTDVVARGIDLPDVDWIVQFDPPQDPSFFVHRVGRTARAGRTGSALTFLSANEDAYVNFLRIRKVPVAKMDE----LAVDDAFRTDVLARVKALQLTDRDIVEKGTKAFISFLRSYKEHQCQFIFRFRDLDLARVAVGFCLFQLPKINELRALE-SIAFEPAGVKVVDIPYKDKVREKQRQAKLAAIAAQHKAEKLENYEKKL-----AKKELEAKAKEAP---RRREKKKGQHQQIVEEWDELDREERLYKKFKRGKISKAEYEEAL 581
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|1214713659|gb|OWZ24543.1| (DEAD/DEAH box RNA helicase [Phytophthora megakarya]) HSP 1 Score: 494.197 bits (1271), Expect = 4.364e-163 Identity = 295/624 (47.28%), Postives = 404/624 (64.74%), Query Frame = 0
Query: 15 LAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMI----------LRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLL-VGGTDIVGD-NFKRFSQDGADILVGTPGRLHDVLER-YGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAARKMRLAEAARERD-RVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKEL 624
+ F P+L LA AL F MTPVQA+T+PLFL+NKDVCV+A TGSGKTLAFV+P V+++ R S + K + A++ISPTRELA+QI + F + LLL VGGT + D R + +++GTPGR D+L R G ++ RE E+LILDEADTLL+MGF+ +L IL+HLPKQRRTGLFSATQT+EV+ LARAG+RNPAT++VQV N Q TP TL N++ +++L L F+ + +K++VFF TC +VD+F+R+L + F+ G + V LHGKM QKKR F+ S G+L+CTDV ARG+D+PDVDWIVQY+PPQDP+FF+HRVGRTARAGR G +L+FL E+ YV FL+++ VP +E+ LP + V+ VK+ + DR++LE+GT+AF AFVR+YKEHQCQFIFRF +LDLGA+AR + LL+LPK+ EL + + +DF++ T I+++DK RE R+ +L A+E + R K+ A R+ R R + E Q+ R+R+K+KG HQQIVEEW+EL EE+L+K++++ KI+ EEYEK L
Sbjct: 1 MRFHDFQPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKAKLADGSITAPRHSNVTK--LAAMVISPTRELARQIFECAEKFFTRALPSVQLLLFVGGTSVDEDLALIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVANN----TQVTPATLENYYCLVGH-DQRLSALQHFVQSKKGEKLIVFFSTCGSVDFFSRVLEE--LFK------------------GNKDFPVVALHGKMPQKKRTTNYDHFSALKS---GLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPC-----EEMTLPLD--TMEDVLPKVKSFIMEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRN--VRIDFEKTDIKTTDIKFKDKAREKERQKKLVAIAKENEARDKKNAEMREKKRKRP--------LEEDTQKPRRREKKKGIHQQIVEEWDELAEEEKLYKKMKKGKITEEEYEKAL 577
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|570981115|gb|ETP41601.1| (hypothetical protein F442_11333, partial [Phytophthora parasitica P10297]) HSP 1 Score: 494.967 bits (1273), Expect = 4.391e-163 Identity = 296/624 (47.44%), Postives = 403/624 (64.58%), Query Frame = 0
Query: 15 LAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMI----------LRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLL-VGGTDIVGD-NFKRFSQDGADILVGTPGRLHDVLER-YGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAARKMRLAEAARERD-RVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKEL 624
+ F P+L LA AL F MTPVQA+T+PLFL+NKDVCV+A TGSGKTL+FV+P V+++ R + L K + A+IISPTRELA+QI + F + LLL VGGT + D + R + +++GTPGR D+L R G ++ RE E+LILDEADTLL+MGF+ +L IL+HLPKQRRTGLFSATQT+EV+ LARAG+RNPAT++VQV N Q TP TL N++ +++L L F+ + +K++VFF TC +VD+F+R+L + F+ G V LHGKM QKKR F+ S G+L+CTDV ARG+D+PDVDWIVQY+PPQDP+FF+HRVGRTARAGR G +L+FL E+ YV FL+++ VP +E+ LP + V+ VK+ L DR++LE+GT+AF AFVR+YKEHQCQFIFRF +LDLGA AR + LL+LPK+ EL + + ++F++ T I+Y+DK RE R+ +LA A+E + R K+ R+ R R GE + + R+R+K+KG HQQIVEEW+EL EE+L+K++++ KI+ EEYEK L
Sbjct: 16 MRFHDFKPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLSFVLPIVQLLKAKLADGSITAPRHADLTK--LVAMIISPTRELARQIFECAEKFFTRALPSVQLLLFVGGTSVDEDLSLIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVANN----TQVTPATLQNYYCLVGH-DQRLSALHHFVQSKKGEKLIVFFSTCGSVDFFSRVLEE--LFK------------------GKNDFPVVALHGKMPQKKRTTNYDHFSTLKS---GLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPC-----EEMTLPLD--TMEDVLPKVKSFILEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAAARGFCLLQLPKINELRN--VRINFEKTDIKTTDIKYKDKAREKERQKKLAVIAKENEARDKKNVEMREKKRKRPLDGENQ-------KHPRRREKKKGLHQQIVEEWDELAEEEKLYKKMKKGKITEEEYEKAL 593
BLAST of EWM26360.1 vs. NCBI_GenBank
Match: gi|325179717|emb|CCA14120.1| (DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]) HSP 1 Score: 495.352 bits (1274), Expect = 5.050e-163 Identity = 291/670 (43.43%), Postives = 402/670 (60.00%), Query Frame = 0
Query: 15 LAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEM----ILRRKS---PLKKH----EVGAIIISPTRELAKQILKVTTHFCSHTGLRPPL---LLVGGTDIVGDNFKRFSQDG---ADILVGTPGRLHDVLERYGHA---IGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRH--------------REKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAARKMRLAEAARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKELR-RRGSDEEGEGEASNEDAAHVSAAS 649
+ F+ + P L + L V AL FT TPVQ+STIP FLT KDVCV A TGSGKTLAF++P + I+ KS P K +V A+I+SPTRELAKQI + F T + P + L VGG D +R + ++VGTPGR+ D+ R+ + V + E+LILDEADTLL++GFK + IL ++PKQRRTGLFSATQT+EVR LARAG+RNP ++VQV ++ Q P TL N+ + +++L L+ FLS E K +VF TCAAVD+F IL P F VL G+ + +LHGKMVQKKR RF + S GVL+CTDV ARG+D+PDVDWI+QY+PPQDP+FF+HR+GRTARAGR G +L+F+ + E+ Y+ +LR++ VP L E E A ++ +K L ++DR+ LE+GTRAF AFVR+YKEHQCQFIFRF LDLG +AR + LL+LPK+ E + I+++ + D I+++DK RE R+ +L E A R + RK +E+G+ P + R+R+K+KG HQQIV+EW+EL EERL+K+ ++ KI+ +YE+ L ++ + +E + ++ E VS S
Sbjct: 1 MEFRQLQPPLCKAILDVVEALEFTHTTPVQSSTIPHFLTGKDVCVNACTGSGKTLAFLLPLAQTLYSKIINYKSIHIPTKNCNTNPKVVAMILSPTRELAKQIHSLCEQF--FTRVLPQVFTGLFVGGNATEMD-LQRIIDETMGKCLVMVGTPGRILDIWTRFAKKNTPLNVEDFEMLILDEADTLLDLGFKQEIDQILQYVPKQRRTGLFSATQTQEVRDLARAGLRNPIVISVQV---ESGSQQVIPTTLNNY-YVVVEHDQRLSVLVKFLSDAFGIGNPVKDEGMAVSEFKCIVFISTCAAVDFFGTILKHLPNFCHVLNGTTGD---------------IVLLHGKMVQKKRVSNYKRFQEIKS---GVLICTDVVARGIDLPDVDWILQYDPPQDPNFFVHRIGRTARAGRTGNALSFISQKEDVYINYLRIRKVPCEELPESYGLRSLE--AVEDILPAIKNLIIQDRDFLEKGTRAFIAFVRSYKEHQCQFIFRFQDLDLGRVARGFALLQLPKIKEFRKYKISLEPTK-GIDISQIKFKDKAREKERQKKLVEYAELR-------SERKPYETLPVFQKEKGK---PTKNPRRREKKKGLHQQIVDEWDELAEEERLYKKFKRGKITENDYEQVLLCKKTTKDEDDKQSDTETTEGVSLES 632 The following BLAST results are available for this feature:
BLAST of EWM26360.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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