EWM26369.1, cds4295 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|585108379|gb|EWM26369.1| (sentrin-specific protease 1 [Nannochloropsis gaditana]) HSP 1 Score: 1316.6 bits (3406), Expect = 0.000e+0 Identity = 629/629 (100.00%), Postives = 629/629 (100.00%), Query Frame = 0
Query: 1 MSHSTSFFTRPRFMLRRKWGHHDEREARYGTKPSAESNSSETPNSFFRGSWRTSTSWAPFSQVYNGASTSSMVPGNEACQYDQQDTGHFPSSDPSIPEATTPHWPPSHPHQRQTACSPIDSNFWHFVDRVIFTREEVRGRAPLIKLVDGIRSERYLINCYGQTQIDKLLAPIDTKADYIHLPRGLSGRPLVKWVSMSEFRGMCASLTPIPSPSAVSMGFRKGVLAESSSPVAGYAFSPKRHRGEGYSHDQSAAPRALVEGGDPSTCFRESHSTPLPPPSIAAGINMDKQKLLEHLQQISDEYLADDGATTAALEAEARVEGVLGGFGGARDPLRHALAAVEETLRKHSAARREAGGKDWRDRAAEIEARMVKDVKEEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSIVKKALTWNGEDA 629
MSHSTSFFTRPRFMLRRKWGHHDEREARYGTKPSAESNSSETPNSFFRGSWRTSTSWAPFSQVYNGASTSSMVPGNEACQYDQQDTGHFPSSDPSIPEATTPHWPPSHPHQRQTACSPIDSNFWHFVDRVIFTREEVRGRAPLIKLVDGIRSERYLINCYGQTQIDKLLAPIDTKADYIHLPRGLSGRPLVKWVSMSEFRGMCASLTPIPSPSAVSMGFRKGVLAESSSPVAGYAFSPKRHRGEGYSHDQSAAPRALVEGGDPSTCFRESHSTPLPPPSIAAGINMDKQKLLEHLQQISDEYLADDGATTAALEAEARVEGVLGGFGGARDPLRHALAAVEETLRKHSAARREAGGKDWRDRAAEIEARMVKDVKEEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSIVKKALTWNGEDA
Sbjct: 1 MSHSTSFFTRPRFMLRRKWGHHDEREARYGTKPSAESNSSETPNSFFRGSWRTSTSWAPFSQVYNGASTSSMVPGNEACQYDQQDTGHFPSSDPSIPEATTPHWPPSHPHQRQTACSPIDSNFWHFVDRVIFTREEVRGRAPLIKLVDGIRSERYLINCYGQTQIDKLLAPIDTKADYIHLPRGLSGRPLVKWVSMSEFRGMCASLTPIPSPSAVSMGFRKGVLAESSSPVAGYAFSPKRHRGEGYSHDQSAAPRALVEGGDPSTCFRESHSTPLPPPSIAAGINMDKQKLLEHLQQISDEYLADDGATTAALEAEARVEGVLGGFGGARDPLRHALAAVEETLRKHSAARREAGGKDWRDRAAEIEARMVKDVKEEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSIVKKALTWNGEDA 629
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|568018107|gb|ETL92284.1| (hypothetical protein, variant 2 [Phytophthora parasitica] >gi|570326509|gb|ETO74457.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976]) HSP 1 Score: 218.394 bits (555), Expect = 1.459e-61 Identity = 108/242 (44.63%), Postives = 156/242 (64.46%), Query Frame = 0
Query: 376 EEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSI 617
EE ++R L P ++ V + L +G +V+ +NVD+ R+ LQ PGTWLNDEVINF+ +L +RD++ A GV +++ FFNSFF +K+ NGY + NVRRW+RK DLF+ DK+F PVN+ N HWC+AVI+M EK+IQY+DS+ G+G L L +Y+ DE + KKK + WELV++ PQQ NG+DCG F+ FA LS + P++++ Q D+P R R+V +
Sbjct: 125 EEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALVKA----GVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFAEYLSLNKPLSFV-QKDIPFHRHRMVLHV 357
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|675167717|ref|XP_008892743.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|566022887|gb|ETI45798.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|568106257|gb|ETN20887.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|570983962|gb|ETP43685.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 217.624 bits (553), Expect = 2.486e-61 Identity = 108/242 (44.63%), Postives = 156/242 (64.46%), Query Frame = 0
Query: 376 EEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSI 617
EE ++R L P ++ V + L +G +V+ +NVD+ R+ LQ PGTWLNDEVINF+ +L +RD++ A GV +++ FFNSFF +K+ NGY + NVRRW+RK DLF+ DK+F PVN+ N HWC+AVI+M EK+IQY+DS+ G+G L L +Y+ DE + KKK + WELV++ PQQ NG+DCG F+ FA LS + P++++ Q D+P R R+V +
Sbjct: 125 EEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALVKA----GVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHV 357
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|570950381|gb|ETP15638.1| (hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 217.624 bits (553), Expect = 2.818e-61 Identity = 108/242 (44.63%), Postives = 156/242 (64.46%), Query Frame = 0
Query: 376 EEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSI 617
EE ++R L P ++ V + L +G +V+ +NVD+ R+ LQ PGTWLNDEVINF+ +L +RD++ A GV +++ FFNSFF +K+ NGY + NVRRW+RK DLF+ DK+F PVN+ N HWC+AVI+M EK+IQY+DS+ G+G L L +Y+ DE + KKK + WELV++ PQQ NG+DCG F+ FA LS + P++++ Q D+P R R+V +
Sbjct: 125 EEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALVKA----GVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHV 357
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|567988909|gb|ETL39179.1| (hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 216.468 bits (550), Expect = 7.061e-61 Identity = 107/242 (44.21%), Postives = 156/242 (64.46%), Query Frame = 0
Query: 376 EEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSI 617
EE ++R L P ++ V + L +G +V+ +NVD+ R+ LQ PGTWLNDEVINF+ +L +RD++ A GV +++ FFNSFF +K+ NGY + NVRRW+RK DLF+ DK+F PVN+ N HWC+AVI+M EK+IQY+DS+ G+G L L +Y+ DE + KKK + WEL+++ PQQ NG+DCG F+ FA LS + P++++ Q D+P R R+V +
Sbjct: 125 EEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALVKA----GVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELMTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHV 357
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|567960186|gb|ETK85750.1| (hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 216.468 bits (550), Expect = 8.087e-61 Identity = 107/242 (44.21%), Postives = 156/242 (64.46%), Query Frame = 0
Query: 376 EEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSI 617
EE ++R L P ++ V + L +G +V+ +NVD+ R+ LQ PGTWLNDEVINF+ +L +RD++ A GV +++ FFNSFF +K+ NGY + NVRRW+RK DLF+ DK+F PVN+ N HWC+AVI+M EK+IQY+DS+ G+G L L +Y+ DE + KKK + WEL+++ PQQ NG+DCG F+ FA LS + P++++ Q D+P R R+V +
Sbjct: 125 EEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALVKA----GVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELMTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHV 357
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|568048551|gb|ETM45595.1| (hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 215.698 bits (548), Expect = 1.363e-60 Identity = 107/242 (44.21%), Postives = 156/242 (64.46%), Query Frame = 0
Query: 376 EEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSI 617
EE ++R L P ++ V + L +G +V+ +NVD+ R+ LQ PGTWLNDEVINF+ +L +RD++ A GV +++ FFNSFF +K+ NGY + NVRRW+RK DLF+ DK+F PVN+ N HWC+AVI++ EK+IQY+DS+ G+G L L +Y+ DE + KKK + WELV++ PQQ NG+DCG F+ FA LS + P++++ Q D+P R R+V +
Sbjct: 125 EEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALVKA----GVLPKRSHFFNSFFYTKV--SENGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHVTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHV 357
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|568018105|gb|ETL92282.1| (hypothetical protein L917_09368 [Phytophthora parasitica] >gi|570326507|gb|ETO74455.1| hypothetical protein F444_09801 [Phytophthora parasitica P1976]) HSP 1 Score: 216.853 bits (551), Expect = 1.397e-59 Identity = 108/242 (44.63%), Postives = 157/242 (64.88%), Query Frame = 0
Query: 376 EEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSI 617
EE ++R L P ++ V + L +G +V+ +NVD+ R+ LQ PGTWLNDEVINF+ +L +RD++ A GV +++ FFNSFF +K+ + NGY + NVRRW+RK DLF+ DK+F PVN+ N HWC+AVI+M EK+IQY+DS+ G+G L L +Y+ DE + KKK + WELV++ PQQ NG+DCG F+ FA LS + P++++ Q D+P R R+V +
Sbjct: 255 EEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALVKA----GVLPKRSHFFNSFFYTKVSE--NGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFAEYLSLNKPLSFV-QKDIPFHRHRMVLHV 487
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|568018106|gb|ETL92283.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570326508|gb|ETO74456.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976]) HSP 1 Score: 216.853 bits (551), Expect = 1.545e-59 Identity = 108/242 (44.63%), Postives = 157/242 (64.88%), Query Frame = 0
Query: 376 EEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSI 617
EE ++R L P ++ V + L +G +V+ +NVD+ R+ LQ PGTWLNDEVINF+ +L +RD++ A GV +++ FFNSFF +K+ + NGY + NVRRW+RK DLF+ DK+F PVN+ N HWC+AVI+M EK+IQY+DS+ G+G L L +Y+ DE + KKK + WELV++ PQQ NG+DCG F+ FA LS + P++++ Q D+P R R+V +
Sbjct: 254 EEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALVKA----GVLPKRSHFFNSFFYTKVSE--NGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFAEYLSLNKPLSFV-QKDIPFHRHRMVLHV 486
BLAST of EWM26369.1 vs. NCBI_GenBank
Match: gi|675167713|ref|XP_008892741.1| (hypothetical protein PPTG_01258 [Phytophthora parasitica INRA-310] >gi|566022885|gb|ETI45796.1| hypothetical protein F443_09736 [Phytophthora parasitica P1569] >gi|568106255|gb|ETN20885.1| hypothetical protein PPTG_01258 [Phytophthora parasitica INRA-310] >gi|570983960|gb|ETP43683.1| hypothetical protein F442_09637 [Phytophthora parasitica P10297]) HSP 1 Score: 216.468 bits (550), Expect = 2.132e-59 Identity = 108/242 (44.63%), Postives = 157/242 (64.88%), Query Frame = 0
Query: 376 EEMVRARMSSLAPAEVKEVHHVLRQGKATDVVARGFNVDMRRQDLQTCNPGTWLNDEVINFFMSLLKERDDSFCAAAAARGVERRKNWFFNSFFMSKLLDDNNGYKYANVRRWSRKAGDLFSYDKVFFPVNIRNTHWCLAVIYMQEKKIQYFDSLVGTGREYLVALRQYIADEHQDKKKSALDISDWELVSSDRQVVPQQGNGADCGCFASAFAYLLSEDLPINYISQADMPAFRQRLVYSI 617
EE ++R L P ++ V + L +G +V+ +NVD+ R+ LQ PGTWLNDEVINF+ +L +RD++ A GV +++ FFNSFF +K+ + NGY + NVRRW+RK DLF+ DK+F PVN+ N HWC+AVI+M EK+IQY+DS+ G+G L L +Y+ DE + KKK + WELV++ PQQ NG+DCG F+ FA LS + P++++ Q D+P R R+V +
Sbjct: 255 EEEEKSRNKELPPELLEIVENALHEGPMEEVLINKYNVDITRRHLQCMLPGTWLNDEVINFYFQMLSDRDEALVKA----GVLPKRSHFFNSFFYTKVSE--NGYNFINVRRWTRKI-DLFAMDKIFMPVNVGNMHWCMAVIHMTEKRIQYYDSMHGSGAACLKVLLRYLHDESEHKKKQKFNDEGWELVTTTPD-TPQQNNGSDCGVFSCMFADYLSLNKPLSFV-QKDIPFHRHRMVLHV 487 The following BLAST results are available for this feature:
BLAST of EWM26369.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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