EWM26359.1, cds4291 (CDS) Nannochloropsis gaditana

Overview
NameEWM26359.1
Unique Namecds4291
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:217970..219208 +
Alignment locationCM002463.1:219458..219931 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26359.1
Productsuccinate-semialdehyde dehydrogenase
Orig transcript idgnl|cribi|Naga_100031g34.2242.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:217970..219208 +
CM002463.1supercontigCM002463.1:219458..219931 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0008152metabolic process
GO:0009450gamma-aminobutyric acid catabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016491oxidoreductase activity
GO:0009013succinate-semialdehyde dehydrogenase [NAD(P)+] activity
Vocabulary: INTERPRO
TermDefinition
IPR016161Ald_DH/histidinol_DH
IPR029510Ald_DH_CS_GLU
IPR016163Ald_DH_C
IPR015590Aldehyde_DH_dom
IPR016162Ald_DH_N
IPR010102Succ_semiAld_DH
Homology
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|585108369|gb|EWM26359.1| (succinate-semialdehyde dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 1165.21 bits (3013), Expect = 0.000e+0
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 0
Query:    1 MLRHLVRRTSSIRAAFPPDSWQAFTACLPRTSRFMVGQLDAVAASAALHPIHPPNHSRGLTTGTTLTGNAASNIHAASAESASEFLDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLGSFR 570
            MLRHLVRRTSSIRAAFPPDSWQAFTACLPRTSRFMVGQLDAVAASAALHPIHPPNHSRGLTTGTTLTGNAASNIHAASAESASEFLDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLGSFR
Sbjct:    1 MLRHLVRRTSSIRAAFPPDSWQAFTACLPRTSRFMVGQLDAVAASAALHPIHPPNHSRGLTTGTTLTGNAASNIHAASAESASEFLDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLGSFR 570          
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|753900162|ref|WP_041635435.1| (NAD-dependent succinate-semialdehyde dehydrogenase [Marinobacter sp. BSs20148])

HSP 1 Score: 627.861 bits (1618), Expect = 0.000e+0
Identity = 296/485 (61.03%), Postives = 377/485 (77.73%), Query Frame = 0
Query:   86 LDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLGSFR 570
            L +P LLR+ AY+NG+W  A+ GKT+EVT+PA    +A VP M   DTR AIE+A AAW  W+    K+R  +LR+W++L+  +  DLA+++T E GKPLAESRGEVGYGASF+E++AEEAKR YG+VIPS    +R++ IKQPVGV A ITPWNFPIAMITRK APALAAGCPVV+KPAEDTPLSALA+  LAE+AGVP G++N++TC + +AA VG EL+ +  VRK+SFTGST VGK+LMR ++ TVKK+SLELGGNAP IVFDDAD++ A+ G++A+K+RN GQTCV  NR+ VQS +YD F   L   V+ + VG GL    Q GPLIN   L+KV+RH+ DA  KGA+++ GG  HALGGTFFEPT+L D   DML+ +EETFGPV  +F+F+ E EAI MAN + FGL+AY ++ ++ + W VAEA+E+GMVG+NEG+IST VAPFGGVKESG+GREG+  G+DEY+E KYLCLG  R
Sbjct:    3 LKNPELLRNRAYINGQWTAARSGKTFEVTNPANGEHLATVPDMDETDTRIAIESAEAAWPAWRSTPAKERAKILRKWFELLMENQEDLARLMTAEQGKPLAESRGEVGYGASFIEWFAEEAKRAYGDVIPSHGKDKRILVIKQPVGVVAAITPWNFPIAMITRKVAPALAAGCPVVVKPAEDTPLSALAITALAEQAGVPAGLINIVTCSKPNAAAVGGELTGNPVVRKISFTGSTPVGKLLMRQASDTVKKVSLELGGNAPFIVFDDADLDAAVIGLMASKYRNTGQTCVCANRVYVQSGVYDAFAEKLKVAVSKMVVGAGLDGDTQQGPLINKAALDKVKRHIADATSKGAKIILGGQPHALGGTFFEPTILIDATQDMLIASEETFGPVAPLFRFETEEEAIAMANDSAFGLSAYFYSNNIHRVWHVAEALESGMVGINEGIISTEVAPFGGVKESGLGREGSHYGLDEYMELKYLCLGGMR 487          
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|399158757|gb|AFP29320.1| (Succinate-semialdehyde dehydrogenase [NADP+] GabD [Marinobacter sp. BSs20148])

HSP 1 Score: 627.861 bits (1618), Expect = 0.000e+0
Identity = 296/485 (61.03%), Postives = 377/485 (77.73%), Query Frame = 0
Query:   86 LDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLGSFR 570
            L +P LLR+ AY+NG+W  A+ GKT+EVT+PA    +A VP M   DTR AIE+A AAW  W+    K+R  +LR+W++L+  +  DLA+++T E GKPLAESRGEVGYGASF+E++AEEAKR YG+VIPS    +R++ IKQPVGV A ITPWNFPIAMITRK APALAAGCPVV+KPAEDTPLSALA+  LAE+AGVP G++N++TC + +AA VG EL+ +  VRK+SFTGST VGK+LMR ++ TVKK+SLELGGNAP IVFDDAD++ A+ G++A+K+RN GQTCV  NR+ VQS +YD F   L   V+ + VG GL    Q GPLIN   L+KV+RH+ DA  KGA+++ GG  HALGGTFFEPT+L D   DML+ +EETFGPV  +F+F+ E EAI MAN + FGL+AY ++ ++ + W VAEA+E+GMVG+NEG+IST VAPFGGVKESG+GREG+  G+DEY+E KYLCLG  R
Sbjct:    5 LKNPELLRNRAYINGQWTAARSGKTFEVTNPANGEHLATVPDMDETDTRIAIESAEAAWPAWRSTPAKERAKILRKWFELLMENQEDLARLMTAEQGKPLAESRGEVGYGASFIEWFAEEAKRAYGDVIPSHGKDKRILVIKQPVGVVAAITPWNFPIAMITRKVAPALAAGCPVVVKPAEDTPLSALAITALAEQAGVPAGLINIVTCSKPNAAAVGGELTGNPVVRKISFTGSTPVGKLLMRQASDTVKKVSLELGGNAPFIVFDDADLDAAVIGLMASKYRNTGQTCVCANRVYVQSGVYDAFAEKLKVAVSKMVVGAGLDGDTQQGPLINKAALDKVKRHIADATSKGAKIILGGQPHALGGTFFEPTILIDATQDMLIASEETFGPVAPLFRFETEEEAIAMANDSAFGLSAYFYSNNIHRVWHVAEALESGMVGINEGIISTEVAPFGGVKESGLGREGSHYGLDEYMELKYLCLGGMR 489          
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|494591520|ref|WP_007350113.1| (NAD-dependent succinate-semialdehyde dehydrogenase [Marinobacter sp. ELB17] >gi|126629220|gb|EAZ99838.1| NAD-dependent aldehyde dehydrogenase [Marinobacter sp. ELB17])

HSP 1 Score: 626.32 bits (1614), Expect = 0.000e+0
Identity = 294/485 (60.62%), Postives = 377/485 (77.73%), Query Frame = 0
Query:   86 LDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLGSFR 570
            L +P LLRD AY+NG+W  A+ GKT++VT+PA    +A VP M   DTR AIE+A  AW  W+    K+R  +LR+W+DL+  +  DLA+++T E GKPLAESRGEVGYGASF+E++AEEAKR YG+VIPS    +R++ IKQP+GV A ITPWNFPIAMITRK APALAAGCPVV+KPAEDTPLSALA+  LAE+AGVP G++N++TC + +AA VG EL+ +  VRK+SFTGST VGK+LMR ++ TVKK+SLELGGNAP IVFDDAD++ A+ G++A+K+RN GQTCV  NR+ VQS +YD F   L   V+ + VG GL+   + GPLIN   L+KV+RH+ DA  KGA+++ GG  HALGGTFFEPT+L D   DML+ +EETFGPV  +F+F+ E EAI MAN + FGL+AY ++ ++ + W VAEA+E+GMVG+NEG+IST VAPFGGVKESG+GREG+  G+DEY+E KYLCLG  R
Sbjct:    5 LKNPELLRDRAYINGQWTAARSGKTFDVTNPANGEHLANVPDMDETDTRIAIESAETAWPAWRSAPAKERAKILRKWFDLLMENQEDLARLMTAEQGKPLAESRGEVGYGASFIEWFAEEAKRAYGDVIPSHGKDKRILVIKQPIGVVAAITPWNFPIAMITRKVAPALAAGCPVVVKPAEDTPLSALAITALAEQAGVPAGLINIITCSKPNAAAVGGELTGNPVVRKISFTGSTPVGKLLMRQASDTVKKVSLELGGNAPFIVFDDADLDAAVIGLMASKYRNTGQTCVCANRVYVQSGVYDAFAEKLKVAVSKMVVGAGLEGDTEQGPLINKPALDKVKRHIADATSKGAKIILGGQPHALGGTFFEPTILIDATQDMLIASEETFGPVAPLFRFETEEEAIAMANDSVFGLSAYFYSNNIHRIWHVAEALESGMVGINEGIISTEVAPFGGVKESGLGREGSHYGLDEYMELKYLCLGGMR 489          
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|780104106|ref|WP_045474187.1| (NAD-dependent succinate-semialdehyde dehydrogenase [Thioploca ingrica] >gi|686204609|dbj|BAP55742.1| succinate-semialdehyde dehydrogenase [Thioploca ingrica])

HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0
Identity = 299/485 (61.65%), Postives = 369/485 (76.08%), Query Frame = 0
Query:   86 LDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLT-CPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLGSF 569
            L D  L R +AY+NG WV A+      VT+PA + V+  VP++G  +T+ AI AA  AW  W+ +T K+R  ++RRW++LI  +  DLA+++T E GKPLAE++ EV YGA+F+E++AEEAKR YG+VIP P PGRR++ IKQP+GV A ITPWNFPIAMITRK APALAAGCPVVIKPAE TP  ALALAELAERAG P G++NV+T  P+E    +GLEL+++  VRKLSFTGST VGK+LM   ASTVK +SLELGGNAP IVFDDADI  AI G +A+K+RN GQTCV  NR L+Q+ IYDEF + LA+ V  LQVG+GL  G Q GPLIN   +EKV+ H+ DAV +GAQ++ GG  HALGGTFFEPTVL      M +  EETFGPV  +F+F  EAEAI +AN TPFGLAAY +  D+G+ WRVAEA+E GMVG+NEG+IST VAPFGG+KESG+GREG+K GID +LE KYLC+G  
Sbjct:    3 LTDSRLFRQQAYINGLWVDAQNKGVLSVTNPADNTVLGTVPNLGRLETKSAIVAAYDAWPSWRNQTAKERATIMRRWFNLIMENQTDLAQLMTAEQGKPLAEAQSEVAYGAAFIEWFAEEAKRVYGDVIPEPVPGRRIMVIKQPIGVVAAITPWNFPIAMITRKCAPALAAGCPVVIKPAESTPYCALALAELAERAGFPQGVINVVTGMPQE----IGLELTSNPLVRKLSFTGSTMVGKLLMEQCASTVKNISLELGGNAPFIVFDDADIPAAITGAIASKYRNTGQTCVCANRFLIQAGIYDEFATQLAQAVNQLQVGNGLAAGTQQGPLINMAAVEKVESHIQDAVTQGAQILCGGHRHALGGTFFEPTVLTGVTAQMRIAHEETFGPVAPLFRFNTEAEAIALANDTPFGLAAYFYTRDLGRAWRVAEALEYGMVGINEGIISTEVAPFGGMKESGIGREGSKYGIDAFLEMKYLCMGGL 483          
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|655497705|ref|WP_028879040.1| (NAD-dependent succinate-semialdehyde dehydrogenase [Terasakiella pusilla])

HSP 1 Score: 622.468 bits (1604), Expect = 0.000e+0
Identity = 296/482 (61.41%), Postives = 371/482 (76.97%), Query Frame = 0
Query:   86 LDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLG 567
            L +P LL+ +A++NG+WV A  G   E+T+PA   +I  VP MGAA+T  AI+ A AA+  WK +T K+RG VLRRW+DL+  +  DLA +++ E GKPL E+RGEV YGASF+E++AEEAKR YG+VIPS    +R+VT+KQP+GV A ITPWNFPIAMITRK  PALAAGCPVV+KPAEDTPLSALA+  LA+ AG+P G+LNV+TC + +   VG  L  S  +RK+SFTGST VGK+LM+ +A TVKK+SLELGGNAP I+FDDAD++ A+ G LA+K+RN GQTCV  NRLLVQ  +YD FV  LA KVA  +VG  L    Q GPLIN   LEKVQRHV DAV KGA+V  GG  HALGGTFFEPT+L D   DM+V  EETFGP+  +++F+ E EAI +AN T FGLA+Y ++ D+G+ WRVAEA+E+GMVG+NEG+IST VAPFGG+KESG+GREG+  G+DEY+E KYLC+G
Sbjct:    5 LSNPDLLKSQAFINGQWVDANDGSILEITNPADGSLITTVPDMGAAETSDAIDKANAAFNDWKARTAKERGAVLRRWFDLMLANQEDLAVLMSAEQGKPLVEARGEVAYGASFLEWFAEEAKRVYGDVIPSHGRDKRIVTVKQPIGVVAAITPWNFPIAMITRKVGPALAAGCPVVVKPAEDTPLSALAMCVLAQEAGLPDGLLNVVTCSKTNTPAVGTTLMESPIIRKVSFTGSTPVGKLLMKQAADTVKKVSLELGGNAPFILFDDADLDAAVEGALASKYRNTGQTCVCANRLLVQDSVYDAFVEKLAAKVATFKVGPSLDGDNQQGPLINQAALEKVQRHVDDAVSKGAKVKLGGKPHALGGTFFEPTILTDVTADMIVTKEETFGPLAPIYRFKTEEEAIALANDTEFGLASYFYSRDIGRIWRVAEALESGMVGINEGIISTEVAPFGGIKESGLGREGSAYGMDEYVEMKYLCMG 486          
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|152073225|gb|EDN70263.1| (Succinic semialdehyde dehydrogenase [Beggiatoa sp. PS])

HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0
Identity = 296/484 (61.16%), Postives = 370/484 (76.45%), Query Frame = 0
Query:   86 LDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLGSF 569
            L++  L   +AY+NG+WV A      EVT+P  + V+  VP MG  +TR AIEAA AAW  W+ K  K+R  ++R+W+ LI  +  DLA ++T E GKPLAES+GEV YGASF+E++AEEAKR YG+VIP P PGRR+V IKQP+GV A ITPWNFPIAMITRK APALAAGCPVVIKP+  TP SALALAELAE+AG P G++NV+T    +A ++G EL+ +  VRKLSFTGST+ GK LM   A+T+KK+SLELGGNAP IVFDDADIE A+ G +A+K+RN GQTCV  NR L+Q  IY EF + LA+ V+ L+VG GL+   Q GPLIN   LEKV+ H++DAV +GA+V+ GG  H LGGTFFEPT+L D  P M V  EETFGPV  +F+F+ EAEAI +AN TP+GLAAY ++ D+G+ WRVAEA+E GMVGVNEG+IST VAPFGG+KESG+GREG+K GI++YLE KY+C+G  
Sbjct:    5 LNNSNLFHQQAYINGQWVNAHQKTVLEVTNPVNNAVLGTVPKMGQIETREAIEAAQAAWVDWRSKLAKERSAIMRQWFQLIIENQQDLAILMTAEQGKPLAESQGEVAYGASFIEWFAEEAKRVYGDVIPEPEPGRRIVVIKQPIGVVAAITPWNFPIAMITRKVAPALAAGCPVVIKPSATTPFSALALAELAEQAGFPNGVVNVVTG---NAQDIGAELTANPLVRKLSFTGSTETGKRLMEQCAATIKKVSLELGGNAPFIVFDDADIEAAVAGAMASKYRNTGQTCVCANRFLIQDGIYQEFATQLAKVVSQLKVGDGLKGETQQGPLINLAALEKVENHINDAVDQGAKVMCGGKRHTLGGTFFEPTILTDVTPTMRVAHEETFGPVAPLFRFKTEAEAIALANDTPYGLAAYFYSRDLGRVWRVAEALEYGMVGVNEGIISTQVAPFGGIKESGIGREGSKYGIEDYLEIKYICMGGL 485          
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|1134158383|ref|WP_076401111.1| (succinate-semialdehyde dehydrogenase (NADP(+)) [Insolitispirillum peregrinum] >gi|1131919594|emb|SIS98855.1| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [Insolitispirillum peregrinum])

HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0
Identity = 295/486 (60.70%), Postives = 370/486 (76.13%), Query Frame = 0
Query:   84 EFLDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLGSF 569
            +FL D  LL  + Y+NG W  A  GKT+ VT+PAT   IA V  M  +DTR AIEAA AA+  W++KT K+RG +LR+W+DLI  +  DLA+++T E GKPL ESRGEV Y ASFVE++AEEAKR YG+ +P+     RLV +++P+GV A ITPWNFP+ MITRK APALAAGCPVV+KPAEDTPLSALAL ELAERAG P G+ NV+TC + HA  VG EL+++  VRK+SFTGST VGK+LM   A+TVKK+SLELGGNAP IVF+DAD++ A+ G +A+K+RNAGQTCV  NR++VQS +YD F + LAE VA L+VG+G+  GV  GPLIN   ++KV+R V+DA  KGA+ + GG  H LGG FFEPT+L     DM  F EE FGPV  +F+F+ E EAI+MAN TPFGLAAY +A D+G+ WRVAE +E GMVG+NEG+IS  VAPFGGVKESG+GREG+K G+D++ E KYLC+G  
Sbjct:    2 DFLKDRSLLHTDGYINGAWSAAASGKTFAVTNPATGAHIADVADMNDSDTRRAIEAANAAFPAWRKKTAKERGAILRKWFDLIIANGEDLAQLMTAEQGKPLTESRGEVVYSASFVEWFAEEAKRVYGDTVPTHKADARLVVVREPIGVVAAITPWNFPLGMITRKCAPALAAGCPVVVKPAEDTPLSALALVELAERAGFPAGVFNVVTCSKPHAIAVGGELTSNPIVRKVSFTGSTPVGKLLMAQCATTVKKVSLELGGNAPFIVFNDADLDAAVVGAMASKYRNAGQTCVCANRIMVQSGVYDAFAAKLAEAVAKLKVGNGIGDGVNQGPLINAAAIDKVERLVNDATSKGAKAIIGGKRHELGGQFFEPTILTGVTRDMACFAEEIFGPVAPLFRFETEEEAIQMANDTPFGLAAYFYARDIGRVWRVAEGLEYGMVGINEGLISNEVAPFGGVKESGLGREGSKYGMDDFTELKYLCMGGL 487          
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|550979082|ref|WP_022727193.1| (NAD-dependent succinate-semialdehyde dehydrogenase [Fodinicurvata sediminis])

HSP 1 Score: 617.076 bits (1590), Expect = 0.000e+0
Identity = 296/496 (59.68%), Postives = 376/496 (75.81%), Query Frame = 0
Query:   72 SNIHAASAESASEFLDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLG 567
            S + AA   SA + L D  L R EAY+NG+WV A  GKT EVT+PAT  V+  +P MGA +TR AIEAA  AW  W+ KT K+R  +LR+W+DL+  +  DLA ++T+E GKPLAE+RGE+ YGASF+E+++EEA+R YG+VIP+    +R++ IKQP+GV   ITPWNFP AMITRKAAPALAAGCP+V+KPAE TP SALALAELAERAG+P GI NV+T     A+++G E++++  VRKLSFTGST+VGK+LMR SA ++KKLSLELGGNA  IVFDDAD++ A+ G + +KFRN GQTCV  NR+ VQ  +YD F +   EK+ +L+VG+GL+ GV  GPLI+   LEKV+ HV DAV KGA+V  GG  H LGGTFFEPT++      M V  EETFGPV  +F+F+ E E IE AN TPFGLA+Y +A DVG+ WRV E +E G+VG+N G+IST VAPFGGVKESG+GREG+K GI+++LE KYLC+G
Sbjct:    2 SAVSAAEKTSAPQ-LKDAKLFRQEAYINGEWVGADSGKTSEVTNPATSDVLGTIPYMGANETRRAIEAANKAWPAWRAKTAKERAGILRKWFDLVMENQEDLATLMTVEQGKPLAEARGEIAYGASFIEWFSEEARRIYGDVIPAHQSDKRIMVIKQPIGVVGAITPWNFPNAMITRKAAPALAAGCPIVLKPAEQTPYSALALAELAERAGIPAGIFNVVTG---KASDIGGEMTSNKTVRKLSFTGSTEVGKLLMRQSADSIKKLSLELGGNASFIVFDDADLDAAVEGAMMSKFRNTGQTCVCANRIYVQDGVYDAFAAKFGEKIKSLKVGYGLEDGVAQGPLIDQPALEKVEEHVSDAVSKGAEVKVGGKRHELGGTFFEPTLMTGVTRQMKVAEEETFGPVAPLFRFKTEEEVIEQANDTPFGLASYFYARDVGRIWRVGEGLETGIVGINTGIISTEVAPFGGVKESGLGREGSKYGIEDFLEMKYLCVG 493          
BLAST of EWM26359.1 vs. NCBI_GenBank
Match: gi|1011232311|ref|WP_062151459.1| (NAD-dependent succinate-semialdehyde dehydrogenase [Beggiatoa leptomitiformis] >gi|933514405|gb|ALG67641.1| succinate-semialdehyde dehydrogenase [Beggiatoa leptomitiformis])

HSP 1 Score: 615.535 bits (1586), Expect = 0.000e+0
Identity = 297/482 (61.62%), Postives = 368/482 (76.35%), Query Frame = 0
Query:   86 LDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIARVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRTYGEVIPSPTPGRRLVTIKQPVGVAALITPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDLHALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLG 567
            L D  L R +AY+NG+WV A  GKT  VT+PAT  ++  VP MGA +T+ AI AA  AW  W+ KT K+R  V+R WY+LI  +  DLA ++T E GKPLAES+GE+ YGA+F+E++AEEAKR YG+VIP+   G+RLV +KQ +G+ A ITPWNFP+AMITRK APALA GCPVVIKPA  TP SALALAELA+RAG+P GI+NVLT    +A  +G E++ +  VRKLSFTGST++GK LM+  A TVKK+SLELGGNAP IVFDDADI+ AI G +A+K+RNAGQTCV  NRLL+Q  IY+ F   LA  V  L VG GLQ  +Q GPLI+   +EKV+ H+ DAV KGA++V GG  H LG TFFEPT+L D   DM V  EETFGPV  +F+F+ EAEAI+MAN T FGLAAY ++ DVG+ WRVAEA+E GMVG+NEG+IST VAPFGG+KESG+GREG+K G+D++LE KYLC+G
Sbjct:    4 LKDTRLFRQQAYLNGQWVNADSGKTIVVTNPATGEILGTVPEMGAVETQRAITAAQCAWAAWRDKTAKERAQVMRGWYNLILENQNDLAILMTAEQGKPLAESKGEINYGAAFIEWFAEEAKRVYGDVIPANKQGQRLVVLKQAIGIVAAITPWNFPMAMITRKCAPALAVGCPVVIKPASQTPFSALALAELADRAGIPAGIINVLT---GNARAIGGEMTANPLVRKLSFTGSTEIGKSLMQQCAGTVKKVSLELGGNAPFIVFDDADIDKAIIGAIASKYRNAGQTCVCANRLLIQEGIYETFAEKLAIAVKQLTVGDGLQADIQQGPLIDMHAVEKVEAHIQDAVAKGARIVCGGKRHVLGKTFFEPTILADVTSDMRVAHEETFGPVAPLFRFKTEAEAIQMANDTEFGLAAYFYSRDVGRVWRVAEALEYGMVGINEGIISTEVAPFGGIKESGIGREGSKYGVDDFLEIKYLCMG 482          
The following BLAST results are available for this feature:
BLAST of EWM26359.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108369|gb|EWM26359.1|0.000e+0100.00succinate-semialdehyde dehydrogenase [Nannochlorop... [more]
gi|753900162|ref|WP_041635435.1|0.000e+061.03NAD-dependent succinate-semialdehyde dehydrogenase... [more]
gi|399158757|gb|AFP29320.1|0.000e+061.03Succinate-semialdehyde dehydrogenase [NADP+] GabD ... [more]
gi|494591520|ref|WP_007350113.1|0.000e+060.62NAD-dependent succinate-semialdehyde dehydrogenase... [more]
gi|780104106|ref|WP_045474187.1|0.000e+061.65NAD-dependent succinate-semialdehyde dehydrogenase... [more]
gi|655497705|ref|WP_028879040.1|0.000e+061.41NAD-dependent succinate-semialdehyde dehydrogenase... [more]
gi|152073225|gb|EDN70263.1|0.000e+061.16Succinic semialdehyde dehydrogenase [Beggiatoa sp.... [more]
gi|1134158383|ref|WP_076401111.1|0.000e+060.70succinate-semialdehyde dehydrogenase (NADP(+)) [In... [more]
gi|550979082|ref|WP_022727193.1|0.000e+059.68NAD-dependent succinate-semialdehyde dehydrogenase... [more]
gi|1011232311|ref|WP_062151459.1|0.000e+061.62NAD-dependent succinate-semialdehyde dehydrogenase... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4301rna4301Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications