EWM26355.1, cds4284 (CDS) Nannochloropsis gaditana

Overview
NameEWM26355.1
Unique Namecds4284
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:200610..200697 +
Alignment locationCM002463.1:200944..201047 +
Alignment locationCM002463.1:201238..201333 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26355.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100031g41.2238.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:200610..200697 +
CM002463.1supercontigCM002463.1:200944..201047 +
CM002463.1supercontigCM002463.1:201238..201333 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR023614Porin_dom
Homology
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BLAST of EWM26355.1 vs. NCBI_GenBank
Match: gi|585108365|gb|EWM26355.1| (hypothetical protein Naga_100031g41 [Nannochloropsis gaditana])

HSP 1 Score: 185.652 bits (470), Expect = 1.829e-59
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 MSFLPPSLPPSLPPSLLPSVLLLLPPSQASDYGVTVGGIYKYSASTTLRAKTSLNGLLAFSAIHDVHPKVQLSATVEGSAKTLQDYRIGFGTVLG 95
            MSFLPPSLPPSLPPSLLPSVLLLLPPSQASDYGVTVGGIYKYSASTTLRAKTSLNGLLAFSAIHDVHPKVQLSATVEGSAKTLQDYRIGFGTVLG
Sbjct:    1 MSFLPPSLPPSLPPSLLPSVLLLLPPSQASDYGVTVGGIYKYSASTTLRAKTSLNGLLAFSAIHDVHPKVQLSATVEGSAKTLQDYRIGFGTVLG 95
The following BLAST results are available for this feature:
BLAST of EWM26355.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108365|gb|EWM26355.1|1.829e-59100.00hypothetical protein Naga_100031g41 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4294rna4294Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications