EWM26391.1, cds4283 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|585108403|gb|EWM26391.1| (voltage-dependent anion-selective channel [Nannochloropsis gaditana]) HSP 1 Score: 170.629 bits (431), Expect = 8.953e-54 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
Query: 1 MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85
MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL
Sbjct: 1 MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|585109984|gb|EWM27711.1| (voltage-dependent anion-selective channel protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 68.9366 bits (167), Expect = 4.465e-12 Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = 0
Query: 8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETG 83
FFKDF + +LNDD++ KR LK+K TPDGV T+E EL+ K + AK++ KYKH +G S+DKL+ K G
Sbjct: 2 FFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSSK----GVMAKLAAKYKH-PSGISLDKLEFKSDG 72
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|299471067|emb|CBN78926.1| (Voltage dependent anion channel [Ectocarpus siliculosus]) HSP 1 Score: 67.3958 bits (163), Expect = 2.440e-11 Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 0
Query: 8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELT-GKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85
F+ D NK A IL+DDY+LKRTLK+KH TP GV VT ++E + G +G + K+ HA +G S+DK +L G +
Sbjct: 53 FYNDLNKVARDILSDDYNLKRTLKMKHTTPHGVTVTAKSEHSKGVNGALE------AKFFHAKSGVSIDKAKLNPDGSM 125
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|325192646|emb|CCA27069.1| (voltagedependent anionselective channel protein puta [Albugo laibachii Nc14]) HSP 1 Score: 58.9214 bits (141), Expect = 2.024e-8 Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 0
Query: 7 AFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85
+KD +K A+ IL DDY R LK+K +GV+ TTE E++ + AK++ +KH TG + +LQ+ G L
Sbjct: 3 VLYKDISKTAENILKDDYDFSRKLKIKSTASNGVSFTTEGEMSANK---SILAKVTASFKHYNTGLHIKRLQVNTQGRL 78
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|635365444|emb|CCI46193.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 57.7658 bits (138), Expect = 6.362e-8 Identity = 30/79 (37.97%), Postives = 41/79 (51.90%), Query Frame = 0
Query: 7 AFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85
+KD K A+ IL DDY R LK+K + +GV TTE E+ + KIS +KH TG + +LQ+ G L
Sbjct: 3 VLYKDIAKTAENILKDDYDFSRKLKIKSTSSNGVTFTTEGEMNANK---SILGKISASFKHYNTGLHIKRLQVNTQGRL 78
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|301090229|ref|XP_002895339.1| (voltage-dependent anion-selective channel protein, putative [Phytophthora infestans T30-4] >gi|262100453|gb|EEY58505.1| voltage-dependent anion-selective channel protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 57.3806 bits (137), Expect = 7.775e-8 Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 0
Query: 6 PAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETG 83
+KD K A+ +L DDY R LK+K +GV+ TTE L G + AK+SG + H A+G KLQ+ G
Sbjct: 2 AVLYKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGALNGNK---SILAKVSGGFTHGASGVVFKKLQITTQG 76
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|1214710429|gb|OWZ21520.1| (Voltage-dependent anion-selective channel protein [Phytophthora megakarya]) HSP 1 Score: 56.225 bits (134), Expect = 2.203e-7 Identity = 30/76 (39.47%), Postives = 40/76 (52.63%), Query Frame = 0
Query: 8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETG 83
+KD K A+ +L DDY R LK+K +GVA TTE L + AK+SG + H A+G KLQ+ G
Sbjct: 4 LYKDLAKTAENVLRDDYDFSRKLKIKSKASNGVAFTTEGALNANK---SILAKVSGGFTHGASGVVFKKLQITTQG 76
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|695431826|ref|XP_009530783.1| (hypothetical protein PHYSODRAFT_354972 [Phytophthora sojae] >gi|348673535|gb|EGZ13354.1| hypothetical protein PHYSODRAFT_354972 [Phytophthora sojae]) HSP 1 Score: 55.0694 bits (131), Expect = 5.308e-7 Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 0
Query: 8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETG 83
+KD K A+ +L DDY R LK+K +GV+ TTE L + AK+SG + H A+G KLQ+ G
Sbjct: 4 LYKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGALNANK---SILAKVSGGFTHGASGVVFKKLQITTQG 76
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|568040654|gb|ETM38102.1| (hypothetical protein L914_15470 [Phytophthora parasitica]) HSP 1 Score: 55.0694 bits (131), Expect = 6.353e-7 Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 0
Query: 8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETG 83
+KD K A+ +L DDY R LK+K +GV+ TTE L + AK+SG + H A+G KLQ+ G
Sbjct: 4 LYKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGALNANK---SILAKVSGGFTHGASGVVFKKLQITTQG 76
BLAST of EWM26391.1 vs. NCBI_GenBank
Match: gi|675204517|ref|XP_008911143.1| (hypothetical protein PPTG_15631 [Phytophthora parasitica INRA-310] >gi|566015146|gb|ETI38057.1| hypothetical protein F443_16075 [Phytophthora parasitica P1569] >gi|567952603|gb|ETK78275.1| hypothetical protein L915_15619 [Phytophthora parasitica] >gi|567981262|gb|ETL31705.1| hypothetical protein L916_15515 [Phytophthora parasitica] >gi|568010809|gb|ETL84992.1| hypothetical protein L917_15336 [Phytophthora parasitica] >gi|568088513|gb|ETN03370.1| hypothetical protein PPTG_15631 [Phytophthora parasitica INRA-310] >gi|570318878|gb|ETO66826.1| hypothetical protein F444_16059 [Phytophthora parasitica P1976] >gi|570942685|gb|ETP07942.1| hypothetical protein F441_15904 [Phytophthora parasitica CJ01A1] >gi|570973324|gb|ETP35985.1| hypothetical protein F442_15925 [Phytophthora parasitica P10297] >gi|970633335|gb|KUF79046.1| Voltage-dependent anion-selective channel protein 2 [Phytophthora nicotianae] >gi|970646817|gb|KUF86844.1| hypothetical protein AM588_10001387 [Phytophthora nicotianae] >gi|970658422|gb|KUF96188.1| Voltage-dependent anion-selective channel protein 2 [Phytophthora nicotianae]) HSP 1 Score: 54.6842 bits (130), Expect = 6.612e-7 Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 0
Query: 8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETG 83
+KD K A+ +L DDY R LK+K +GV+ TTE L + AK+SG + H A+G KLQ+ G
Sbjct: 4 LYKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGALNANK---SILAKVSGGFTHGASGVVFKKLQITTQG 76 The following BLAST results are available for this feature:
BLAST of EWM26391.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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