EWM26394.1, cds4280 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|585108409|gb|EWM26394.1| (Beta-lactamase/transpeptidase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1137.48 bits (2941), Expect = 0.000e+0 Identity = 556/556 (100.00%), Postives = 556/556 (100.00%), Query Frame = 0
Query: 1 MLRGTEAAAALAGESLPPNSSLPVPPVVAHKCSNTIRGAFNDIILKNKGFGGGILRIESLARGLLWEGSWGKVQHSSKEEDMTPSTRFEIASITKTFVASTLMLLLARHSLSDFRTNSNLDFSANFSTSCTIPCLPPSSCGPLPSPSSSSAPYYKIRLSLGLDTTLADAAPFPSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFPYLQSSPSFSPFRARGAGKNARGKSGGGSSTKRRPGNERIDKEAKKERLPKKDEREAPSPSEGGNEVGKKNGARLPTAGPILSHRYESEEDLVNVPRQSADWAGGGLVSSAQDLTLFARKGLLGSRSGGREGVSLADIMMAESVLTGMNGVWSSLGLFVMDLEEEEDGVDGRIWGHDGWGHSFMFVYEPPQSDQQHAESDILILTGTVNQQDERADPWQAIMEGLRCMLKAGNSFDKNEKF 556
MLRGTEAAAALAGESLPPNSSLPVPPVVAHKCSNTIRGAFNDIILKNKGFGGGILRIESLARGLLWEGSWGKVQHSSKEEDMTPSTRFEIASITKTFVASTLMLLLARHSLSDFRTNSNLDFSANFSTSCTIPCLPPSSCGPLPSPSSSSAPYYKIRLSLGLDTTLADAAPFPSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFPYLQSSPSFSPFRARGAGKNARGKSGGGSSTKRRPGNERIDKEAKKERLPKKDEREAPSPSEGGNEVGKKNGARLPTAGPILSHRYESEEDLVNVPRQSADWAGGGLVSSAQDLTLFARKGLLGSRSGGREGVSLADIMMAESVLTGMNGVWSSLGLFVMDLEEEEDGVDGRIWGHDGWGHSFMFVYEPPQSDQQHAESDILILTGTVNQQDERADPWQAIMEGLRCMLKAGNSFDKNEKF
Sbjct: 1 MLRGTEAAAALAGESLPPNSSLPVPPVVAHKCSNTIRGAFNDIILKNKGFGGGILRIESLARGLLWEGSWGKVQHSSKEEDMTPSTRFEIASITKTFVASTLMLLLARHSLSDFRTNSNLDFSANFSTSCTIPCLPPSSCGPLPSPSSSSAPYYKIRLSLGLDTTLADAAPFPSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFPYLQSSPSFSPFRARGAGKNARGKSGGGSSTKRRPGNERIDKEAKKERLPKKDEREAPSPSEGGNEVGKKNGARLPTAGPILSHRYESEEDLVNVPRQSADWAGGGLVSSAQDLTLFARKGLLGSRSGGREGVSLADIMMAESVLTGMNGVWSSLGLFVMDLEEEEDGVDGRIWGHDGWGHSFMFVYEPPQSDQQHAESDILILTGTVNQQDERADPWQAIMEGLRCMLKAGNSFDKNEKF 556
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|873220900|emb|CEM34603.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 100.138 bits (248), Expect = 8.743e-19 Identity = 80/299 (26.76%), Postives = 125/299 (41.81%), Query Frame = 0
Query: 34 NTIRGAFNDIILKNKGFGGGILRIESLARGLLWEGSWGKVQHSSKEEDMTPSTRFEIASITKTFVASTLMLLL--ARHSLSDFRTNSNLDFSANFSTSCTIPCLPPSSCGPLPSPSSSSAPYYKIRLSLGLDTTLADAAPFPSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFPYLQSSPSFSPFRAR 330
N ++ + + +N+G GGG+ R+ES +G+LW+ + G++ + DMT T FEIASITKT A+ ++ L+ R SL D + LP G +P + G D T+ + T+ LLSH G+ D+W + +FL + + + W E + AA P P +S + +AY DTNYV++G L+E TG+ LH V E +F PL + TY Y + + +P R
Sbjct: 115 NALQKVLDKQVRRNRGKGGGVARVESTDKGILWQSTSGRLYGGADAPDMTLDTLFEIASITKTVTAAVVLKLVEAGRISLRD----------------EVVDLLPD---GAVPE---------GLLTVNGTDGTV--------------------NLTVWHLLSHRGGLPDFWDNWNFLEEYDADPNYDWTPQETIAWAAAMDKEFP-----------------PQTSIKGN----------FAYGDTNYVILGLLVEHLTGKALHKVFREAIFDPLDMNSTYMSYKEEPRTDAPLSHR 338 HSP 2 Score: 67.0106 bits (162), Expect = 4.196e-8 Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 0
Query: 397 LSHRYESE-EDLVNVPRQSADWAGGGLVSSAQDLTLFARKGLLGSRSGGREGVSLADIMMAESVLTGM------NGVWSSLGLFVMDLEEEEDGVDGRIWGHDGWGHSFMFVYEPPQSDQQHAESDILILTGTVNQQD 527
LSHRY + EDL NV RQ+ADWA GGL+S D ++F R G EG ++ +A ++ G N W GL M+L+ + G+ G ++GH G+G+S+ F +++ L + GTVN ++
Sbjct: 335 LSHRYGYDSEDLHNVTRQAADWASGGLISDVHDTSIFIR--------GFMEGRIISPDTLANALDAGQAASSFSNAEWIYYGLGTMELQMDWIGL-GYVYGHVGYGNSYAF----------YSQKRKLAVVGTVNNEE 453
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|1125752484|ref|WP_075080154.1| (hypothetical protein [Terrimicrobium sacchariphilum] >gi|1012439753|dbj|GAT34534.1| CubicO group peptidase, beta-lactamase class C family [Terrimicrobium sacchariphilum]) HSP 1 Score: 88.1965 bits (217), Expect = 1.168e-14 Identity = 63/169 (37.28%), Postives = 88/169 (52.07%), Query Frame = 0
Query: 391 PTAGPILSHRYESEEDLVNVPRQSADWAGGGLVSSAQDLTLFARKGLLGSRSGGREGVSLADIMMAESVL----TGMNGVWSSLGLFVMDLEEEEDGVDGRIWGHDGWGHSFMFVYEPPQSDQQHAESDILILTGTVNQQDERADPWQAIMEGLRCMLKAGNSFDKNEK 555
P G SHRYE EDL +VPRQSADWAGGGLVS+A+DL F R G +G D +++L TG + LGL+ + L DG G +WGHDG G+SF + + PQ + TGT+NQ D + W ++E K+ + F+++ +
Sbjct: 234 PRRGAPQSHRYEGSEDLTDVPRQSADWAGGGLVSTARDLERFLR--------GLADGKLFHDPATLQAMLTFVPTGEQDISYGLGLYRVKL----DGGLGEVWGHDGHGNSFAYYW--PQRG--------VTFTGTLNQVD---NDWWPLVEAWVSGGKSLSDFEEDRQ 377
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|1113231510|gb|OJU98088.1| (hypothetical protein BGO12_06720, partial [Verrucomicrobia bacterium 61-8]) HSP 1 Score: 86.2705 bits (212), Expect = 3.242e-14 Identity = 61/158 (38.61%), Postives = 83/158 (52.53%), Query Frame = 0
Query: 398 SHRYESEEDLVNVPRQSADWAGGGLVSSAQDLTLFARKGLLGSRSGGREGVSLADIMMAESVLTGMNGVWSSLGLFVMDLEEEEDGVDGRIWGHDGWGHSFMFVYEPPQSDQQHAESDILILTGTVNQQDERADPWQAIMEGLRCMLKAGNSFDKNEK 555
SHRYE EDL +VPRQSADWAGGGLVS+A+DL F R G E + M V TG + LGL+ + L DG G +WGHDG G+SF + + PQ + TGT+NQ D + W ++E K+ + F+++ +
Sbjct: 172 SHRYEGSEDLTDVPRQSADWAGGGLVSTARDLERFLRGLADGKLFRNPETLQ----AMLTFVPTGEQDISYGLGLYRVKL----DGGLGEVWGHDGHGNSFAYYW--PQRG--------VTFTGTLNQVD---NDWWPLVEAWVSGGKSLSDFEEDRQ 308
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|873233079|emb|CEM04154.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 79.337 bits (194), Expect = 5.934e-12 Identity = 115/500 (23.00%), Postives = 175/500 (35.00%), Query Frame = 0
Query: 46 KNKGFGGGILRIESLARGLLWEGSW--GKVQHSSKEEDMTPSTRFEIASITKTFVASTLMLLLARHSLSDFRTNSNLDFSANFSTSCTIPCLPPSSCGPLPSPSSSSAPYYKIRLSLGLDTTLADAAPFPSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPP--LPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFPYLQSSPSFSPFRARGAGKNARGKSGGGSSTKRRPGNERIDKEAKKERLPKKDEREAPSPSEGGNEVGKKNGARLPTAGPILSHRYESEEDLVNVPRQSADWAGGGLVSSAQDLTLFARKGLLGSRSGG----REGVSL---ADIMMAESVLTGMNGVWSSL---GLFVMDLEEEEDGVDGRIWGHDGWGHSFMFVYEPPQSDQQHAESDILILTGTVNQQDERAD 531
+N G+G G++RI L+WEG++ G ++ +T +EIASI+K A+T+ + KI LS + + + P L + + T+ LL+H SG+ DYW P F F + +R W +E++ + AKM +P + P + + YSDTNYVL+G L+E G+ L V L+ PL + T+ Y + S P R K A GNE+ID K RQ+A+W GGGLVS+ +DL R GG E V D G W ++ G+F + ++E+ G I GH+G+G SF + + PP + L GT+NQ ++ D
Sbjct: 72 RNLGWGAGLMRIAKGDGTLVWEGAYDGGPPGRNANPPPVTRKHPYEIASISKMLTAATVFTYVDEG---------------------------------------------KINLSDKIMDLVPNETRVPPNLHQINGTNYTDQITVEMLLNHKSGLPDYWNSPDFNKTFLADINRRWEPEEVIP-FVAKMEAHYVPHTGEDEPYFAKY-------------------DQYAVYYSDTNYVLLGFLLEELEGKPLADVYKVRLYEPLNMTSTWLRYREKPRSSLPILNRYWSKPAIH------------GNEQIDMSTHK--------------------------------------------------RQTAEWGGGGLVSTTEDLVKVLRGIFESPGPGGLYKNNETVQRFFGPDAFHMHVDYDVKEGQWDNVYSSGIFAVKFDDED---MGEILGHEGFGSSFAYWW-PPVKTSDGRQVGGYHLVGTLNQLEQLPD 440
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|1008850232|gb|KYK33066.1| (hypothetical protein AYK18_05270 [Theionarchaea archaeon DG-70]) HSP 1 Score: 74.3294 bits (181), Expect = 9.645e-11 Identity = 85/356 (23.88%), Postives = 127/356 (35.67%), Query Frame = 0
Query: 190 LRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFPYLQSSPSFSPFRARGAGKNARGKSGGGSSTKRRPGNERIDKEAKKERLPKKDEREAPSPSEGGNEVGKKNGARLPTAGPILSHRYESEEDLVNVPRQSADWAGGGLVSSAQDLTLFARKGLLGSRSGGREGVSLAD-IMMAESVLTGMNGVWSSLGLFVMDLEEEEDGVD-GRIWGHDGWGHSFMFVYEPPQSDQQHAESDILILTGTVNQQDERADPWQAIMEGLRCM 543
+R LL+HTSG+ D W+D +F+ ++ + W +E + PP F+P+ + YSD NY L G +I+ TG+KLH V E L PLG+ TY P+ RE P PS G R P+ + Y L SADWAGGGL S+ +DL F R +A + ++ES+ G+ V V+D + D V G I GH G SFM+ + + + GT+NQ + + + + L+ +
Sbjct: 115 IRQLLNHTSGLGDNWSDINFIQLILTDTDKLWEPEETIAYVKMHCPP---QFAPAQG---------------------------FHYSDINYNLAGLIIQEITGKKLHEVYREMLLDPLGMNHTYRPF----------------------------------------------------REDPRPSIAG---------RAPSCSYMGDINYTFYRSL------SADWAGGGLQSTTEDLNRFLRAFFRNEILNPSTRNEMAQWVNVSESLYYGLGIVRC-----VLDEAGDPDLVGLGEILGHQGASGSFMYYWLDKDT----------TICGTMNQAENESKIGEIVANILKIL 358
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|931374469|gb|KPJ65294.1| (hypothetical protein AMJ43_11025 [Coxiella sp. DG_40]) HSP 1 Score: 72.7886 bits (177), Expect = 4.359e-10 Identity = 64/262 (24.43%), Postives = 92/262 (35.11%), Query Frame = 0
Query: 66 WEGSWGKVQHSSKEEDMTPSTRFEIASITKTFVASTLMLLLARHSLSDFRTNSNLDFSANFSTSCTIPCLPPSSCGPLPSPSSSSAPYYKIRLSLGLDTTLADAAPFPSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFPYLQSSPSFSPF 327
W+G+ G K E MT + +IASI KTF A+ ++ L+ L L P +D L + L + R T+ LL+HTSGIADY DP F+ E++ W+ EIL Y +F P + YSD NYVL+ +IE TG L + + +F PLG+ ++Y Y + P
Sbjct: 69 WKGAAGMA--DGKAEIMTADHKIKIASIGKTFTATLVLQLIEEGYLK------------------------------LDDP---------------IDMYLDNPIVMLDSLHIYEGTAYGRQITVGQLLNHTSGIADYMEDPQFVPDVIEHAEELWSPSEILSKYYEYQTNEKATFPPGEG---------------------------FNYSDVNYVLLAMIIENITGATLQSQLKARIFDPLGMENSYLEYYEEPRGTKPL 256
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|917118708|ref|WP_051725420.1| (hypothetical protein [Streptacidiphilus jeojiense]) HSP 1 Score: 70.8626 bits (172), Expect = 1.711e-9 Identity = 68/276 (24.64%), Postives = 108/276 (39.13%), Query Frame = 0
Query: 47 NKGFGGGILRIES-------LARGLLWEGSWGKVQHSSKEEDMTPSTRFEIASITKTFVASTLMLLLARHSLSDFRTNSNLDFSANFSTSCTIPCLPPSSCGPLPSPSSSSAPYYKIRLSLGLDTTLADAAPFPSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYF 315
N G G I+R++ +AR + W + H+ +T + RF + S TKT VA+ ++ L+A H ++RL+ P +L L P ++ T+R LL HTSG+ +Y DP L AF+ RTW +++ A + PL F+P + Y+YS+TNY+L+G L+E +G+ L ++ E + PL L DTY
Sbjct: 59 NAGAPGVIVRVDDGSGQVVRIAR----QSPWSRDDHT-----LTAADRFRMGSNTKTMVATVVLQLVAEH---------------------------------------------RVRLT----------DPVARWLPGLV--PGGQAITVRMLLDHTSGLFNYVNDPDVLKAFTGQDTRTWTPRQLVA-AAVRHDPL---FAPGTR---------------------------YSYSNTNYILLGMLVEKASGRSLADLVQERIARPLHLKDTYL 237
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|496579649|ref|WP_009280429.1| (serine hydrolase [Fibrisoma limi] >gi|387847273|emb|CCH51843.1| beta-lactamase [Fibrisoma limi BUZ 3]) HSP 1 Score: 69.3218 bits (168), Expect = 5.817e-9 Identity = 58/229 (25.33%), Postives = 88/229 (38.43%), Query Frame = 0
Query: 173 PSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFPYLQ----SSPSFSPFRARGAGK--NARGKSGGGSSTKRRPGNERIDKEAKKERLPKKDEREAPSPSEGGNEVGKKNGARLPTAGP 395
P L + +S T+ LL HTSG+ADY + +FL N + W+A+ I++ C + + + P YA DTNYVL+ LIE T + LH + E +F PLG+ +TY + Q +P P+ + + N GGG R + RL +K P+ + +N AR P
Sbjct: 127 PDRLHRFGGHDYGQSITVEHLLRHTSGLADYIDNEAFLANVMANPQQHWSAETIMQ-------------------------CFEELKLADKAVAPPGERMHYA--DTNYVLLAILIEQLTDKPLHQNLTERIFEPLGMDNTYLEFYQPPRGQAPLLYPYVGELSLRHINTSFDWGGGGLVSTHADLHRFIRNLVGGRLFRK-----PTTLTQMTDFRPENNARFMLGSP 323
BLAST of EWM26394.1 vs. NCBI_GenBank
Match: gi|559793358|ref|WP_023590074.1| (serine hydrolase [Streptomyces thermolilacinus] >gi|1070713829|gb|OEJ97446.1| peptidase S12 [Streptomyces thermolilacinus SPC6]) HSP 1 Score: 69.3218 bits (168), Expect = 6.768e-9 Identity = 43/157 (27.39%), Postives = 69/157 (43.95%), Query Frame = 0
Query: 160 LGLDTTLADAAPFPSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSCCSPSSSSSSSSSSSPSSSFPYAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFP 316
L LD T+ P P W TLR LL+HTSG+ DY P F ++N +++ +L D+ A P F+P + YAYS+++ + + ++EA TG++ ++ E ++ PLGL DT+ P
Sbjct: 141 LRLDDTIGRVLP--------ALPAAWHRVTLRQLLNHTSGLPDYSASPRFAAILNQNPRHRFDSRRLL-DFVADQP---LRFTPGSR---------------------------YAYSNSDNIAVALMVEAATGRRYEDLLQELVYRPLGLRDTHLP 258 The following BLAST results are available for this feature:
BLAST of EWM26394.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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