EWM26395.1, cds4279 (CDS) Nannochloropsis gaditana

Overview
NameEWM26395.1
Unique Namecds4279
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:190276..191013 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26395.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100715g3.2646.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:190276..191013 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel
Homology
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|585108410|gb|EWM26395.1| (hypothetical protein Naga_100715g3 [Nannochloropsis gaditana])

HSP 1 Score: 507.294 bits (1305), Expect = 0.000e+0
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query:    1 MHQSSVQKEAERPATLRPEPAIFCIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHFHVVQPGTHEVKDKMVKIVAVKPHTGKLNDLIAKLKKHDVALRKAGYTTGRPAMHMRGEKEGHVVEVAEWASVQKVKEAQKSDDVHGLWNEFNVSVEHNCPLTCLPEAKDRYSLFPAITLHTMSE 245
            MHQSSVQKEAERPATLRPEPAIFCIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHFHVVQPGTHEVKDKMVKIVAVKPHTGKLNDLIAKLKKHDVALRKAGYTTGRPAMHMRGEKEGHVVEVAEWASVQKVKEAQKSDDVHGLWNEFNVSVEHNCPLTCLPEAKDRYSLFPAITLHTMSE
Sbjct:    1 MHQSSVQKEAERPATLRPEPAIFCIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHFHVVQPGTHEVKDKMVKIVAVKPHTGKLNDLIAKLKKHDVALRKAGYTTGRPAMHMRGEKEGHVVEVAEWASVQKVKEAQKSDDVHGLWNEFNVSVEHNCPLTCLPEAKDRYSLFPAITLHTMSE 245          
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|1095017725|emb|SEN53122.1| (Antibiotic biosynthesis monooxygenase [Paenibacillus sp. OV219])

HSP 1 Score: 88.1965 bits (217), Expect = 1.021e-18
Identity = 41/100 (41.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:   22 IFCIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHF 121
            I  I T+ PHPG+E++L+  +++H   L A GL +    PL L++  G +LE+FEW  AEA + AHR   +++ W  L+EV  M  LASL E ++P+++F
Sbjct:    7 IVAIATYRPHPGKEEQLKDIVRRHLPTLRAEGL-ITEMTPLHLQAEDGSILEIFEWASAEAKDAAHRSPAVREVWGVLMEVAEMTALASLAEAAQPFSNF 105          
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|1125456916|gb|OLD82197.1| (hypothetical protein AUF67_05200 [Acidobacteria bacterium 13_1_20CM_58_21])

HSP 1 Score: 73.559 bits (179), Expect = 2.507e-13
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0
Query:   23 FCIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHFHVVQ 125
              I  + P PG+ + L +  + H   L A GL  P +E + + +  G ++EVFEWK  EA+E AH+   +Q  WK   +V   VP+AS+ E  + +A F  V+
Sbjct:    4 IVIVGYKPKPGKAEALRSLARTHIQGLRAEGLVTP-REAIIMEANDGTIIEVFEWKSKEAIESAHKNLAVQALWKGFSDVCDYVPVASIAEAKQLFAEFAAVR 105          
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|492910315|ref|WP_006040721.1| (hypothetical protein [Paenibacillus curdlanolyticus] >gi|304342602|gb|EFM08450.1| conserved hypothetical protein [Paenibacillus curdlanolyticus YK9])

HSP 1 Score: 72.7886 bits (177), Expect = 7.003e-13
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:   23 FCIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLF-LRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHF 121
            F I  + P+PG+E EL   +++H  AL   GL    + PL  L    G ++E+FEWK AEAM +AH+   +   W++++ V  M  LASL E ++P+ +F
Sbjct:    6 FAIALYRPNPGKENELRAIVKEHEPALRQEGLIT--EHPLTRLEGADGTIIEMFEWKSAEAMHQAHKSPVIWPIWERMMAVAEMANLASLQEANQPFPNF 103          
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|1054498724|ref|WP_066287195.1| (hypothetical protein [Fictibacillus arsenicus] >gi|1049089198|gb|ANX11397.1| hypothetical protein ABE41_005210 [Fictibacillus arsenicus])

HSP 1 Score: 71.2478 bits (173), Expect = 2.335e-12
Identity = 32/101 (31.68%), Postives = 59/101 (58.42%), Query Frame = 0
Query:   21 AIFCIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHF 121
            A+  +  + PH G+E++L   L+ H   L A  L + ++EP+  R+  G V+E+FEW+  +A + AH    +   W +++E+  +  L+SLGE + P+ +F
Sbjct:    3 ALITMALYQPHEGKEEQLNEVLRNHIKTLEAENL-ITSREPIRARAANGTVIEIFEWRSEQAKDAAHESPGVMRVWNEIMEIAEIKSLSSLGEANHPFPNF 102          
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|1180208007|ref|WP_083727359.1| (hypothetical protein [[Flexibacter] sp. ATCC 35208] >gi|1137570722|gb|OMP76354.1| hypothetical protein BW716_25520 [[Flexibacter] sp. ATCC 35208])

HSP 1 Score: 68.9366 bits (167), Expect = 1.361e-11
Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = 0
Query:   25 IKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHF 121
            I  + P PG+EKEL+T  +KH+  L  A L V ++ P+ ++++ G V+EVFEWK   A+E+AH    +   W++   V   VP+  L E    ++ F
Sbjct:    7 IVGYQPKPGKEKELDTLTRKHYSLLKGADL-VSDRTPIIMKAKNGTVVEVFEWKSDAAIEQAHTHPVVLKLWEEYAAVCEYVPVGGLEEMCNLFSTF 102          
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|502590576|ref|WP_012828215.1| (hypothetical protein [Haliangium ochraceum] >gi|262079646|gb|ACY15615.1| hypothetical protein Hoch_3113 [Haliangium ochraceum DSM 14365])

HSP 1 Score: 68.5514 bits (166), Expect = 2.310e-11
Identity = 38/97 (39.18%), Postives = 51/97 (52.58%), Query Frame = 0
Query:   25 IKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHF 121
            I  + P PG+  EL T L+ H   L A GL V  +  + + +  G V+EVFEW  AEA+  AH    +Q  W    EV   VP+ASL E S  ++ F
Sbjct:    6 IACYGPKPGKTAELHTLLKSHLPTLRAEGL-VTERAGIAMAAADGTVVEVFEWASAEAIAHAHENPSVQAMWAAYAEVCDYVPVASLAEASALFSEF 101          
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|1148701039|ref|WP_077439327.1| (hypothetical protein [Rhodanobacter sp. C01] >gi|1147846756|gb|OOG50904.1| hypothetical protein B0E50_01540 [Rhodanobacter sp. C01])

HSP 1 Score: 68.1662 bits (165), Expect = 3.154e-11
Identity = 36/108 (33.33%), Postives = 57/108 (52.78%), Query Frame = 0
Query:   23 FCIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHFHVV--QPGT 128
            F I  + P PG ++ L   ++KH   L +  L V ++ P  +R+  G ++EVFEW+ A+A+ +AH    +Q  W +       VPLA+L E  + +A F  V   PG 
Sbjct:    4 FVIVAYKPKPGMDEALLAAVKKHVAVLRSEQL-VSDRAPYAMRAADGTIVEVFEWRSADAIHQAHANAAVQALWDEFGAACDYVPLANLAEAQQMFAEFDSVDLSPGA 110          

HSP 2 Score: 62.3882 bits (150), Expect = 4.869e-9
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 0
Query:  138 IVAVKPHTGKLNDLIAKLKKHDVALRKAGYTTGRPAMHMRGEKEGHVVEVAEWASVQKVKEAQKSDDVHGLWNEFNVSVEHNCPLTCLPEAKDRYSLFPAITL 240
            IVA KP  G    L+A +KKH   LR     + R    MR   +G +VEV EW S   + +A  +  V  LW+EF  + ++  PL  L EA+  ++ F ++ L
Sbjct:    6 IVAYKPKPGMDEALLAAVKKHVAVLRSEQLVSDRAPYAMRA-ADGTIVEVFEWRSADAIHQAHANAAVQALWDEFGAACDY-VPLANLAEAQQMFAEFDSVDL 106          
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|950266009|ref|WP_057302198.1| (hypothetical protein [Paenibacillus sp. Root444D2] >gi|945713834|gb|KQX68162.1| hypothetical protein ASD40_25095 [Paenibacillus sp. Root444D2])

HSP 1 Score: 68.1662 bits (165), Expect = 3.294e-11
Identity = 34/104 (32.69%), Postives = 61/104 (58.65%), Query Frame = 0
Query:   21 AIFCIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHFHVV 124
            ++F +  + PHPG+E EL   ++ H   L   GL + +  P+ L+S  G ++E+FEW   EA ++AH   ++   W+ +++V  +V L+SL E  +P+ +F  V
Sbjct:    5 SMFTMAMYRPHPGKEGELAEIVKGHVPMLREEGL-ITDFTPVTLQSVDGTLIEIFEWLSEEAKDKAHTSPKVWPIWENMMKVAELVSLSSLPEADKPFPNFKRV 107          
BLAST of EWM26395.1 vs. NCBI_GenBank
Match: gi|522018001|ref|WP_020529272.1| (hypothetical protein [Flexithrix dorotheae])

HSP 1 Score: 67.781 bits (164), Expect = 4.923e-11
Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 0
Query:   24 CIKTFMPHPGQEKELETRLQKHWDALHAAGLTVPNQEPLFLRSRAGRVLEVFEWKDAEAMEEAHRRGELQDTWKKLLEVGTMVPLASLGECSEPYAHF 121
             I  + P  G++KEL+  ++ HW  L   GL V N++ + + ++ G ++EVF WK  +A+E AH+   +Q  W +  EV   VP+  + E  E ++ F
Sbjct:    5 VIIGYKPFAGKKKELKDLMKNHWLILSNEGL-VSNRKSIMMEAKDGTIIEVFGWKSKKAIESAHQNEAVQKMWAEFSEVCEFVPVGKIKESLELFSEF 101          
The following BLAST results are available for this feature:
BLAST of EWM26395.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108410|gb|EWM26395.1|0.000e+0100.00hypothetical protein Naga_100715g3 [Nannochloropsi... [more]
gi|1095017725|emb|SEN53122.1|1.021e-1841.00Antibiotic biosynthesis monooxygenase [Paenibacill... [more]
gi|1125456916|gb|OLD82197.1|2.507e-1334.95hypothetical protein AUF67_05200 [Acidobacteria ba... [more]
gi|492910315|ref|WP_006040721.1|7.003e-1338.00hypothetical protein [Paenibacillus curdlanolyticu... [more]
gi|1054498724|ref|WP_066287195.1|2.335e-1231.68hypothetical protein [Fictibacillus arsenicus] >gi... [more]
gi|1180208007|ref|WP_083727359.1|1.361e-1136.08hypothetical protein [[Flexibacter] sp. ATCC 35208... [more]
gi|502590576|ref|WP_012828215.1|2.310e-1139.18hypothetical protein [Haliangium ochraceum] >gi|26... [more]
gi|1148701039|ref|WP_077439327.1|3.154e-1133.33hypothetical protein [Rhodanobacter sp. C01] >gi|1... [more]
gi|950266009|ref|WP_057302198.1|3.294e-1132.69hypothetical protein [Paenibacillus sp. Root444D2]... [more]
gi|522018001|ref|WP_020529272.1|4.923e-1132.65hypothetical protein [Flexithrix dorotheae][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4289rna4289Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications