EWM26392.1, cds4278 (CDS) Nannochloropsis gaditana

Overview
NameEWM26392.1
Unique Namecds4278
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:188789..189223 +

Link to JBrowse

Properties
Property NameValue
Start range188789
Start range.
Protein idEWM26392.1
Productputative caspase
Partialtrue
Orig transcript idgnl|cribi|Naga_100715g5.2643.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:188789..189223 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004197cysteine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR011600Pept_C14_caspase
IPR029030Caspase-like_dom
Homology
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|585108407|gb|EWM26392.1| (putative caspase, partial [Nannochloropsis gaditana])

HSP 1 Score: 298.13 bits (762), Expect = 2.196e-102
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
Query:    1 PPALFPTLLPVLQVVNSLANAGLAYLSGNKAVALMSGLEAVGTMLFGPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKIDLFSPFKM 144
            PPALFPTLLPVLQVVNSLANAGLAYLSGNKAVALMSGLEAVGTMLFGPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKIDLFSPFKM
Sbjct:    1 PPALFPTLLPVLQVVNSLANAGLAYLSGNKAVALMSGLEAVGTMLFGPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKIDLFSPFKM 144          
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|1183377084|gb|ORY02639.1| (hypothetical protein K493DRAFT_277186 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 125.946 bits (315), Expect = 4.007e-31
Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 0
Query:   17 SLANAGLAYLSGNKAVALMSGLEAVGTMLFGPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKIDLFSPFKM 144
            +L  AGL+Y  G++A A+    E V + LF PK N +A+++ EE  +S ADVIQF GCRD+QTSAD  ID QATGA+S ALI  LSQ  N  Y Q+LK +R +L+GKY+QIPQ+S+   +D+ + F M
Sbjct:  399 ALLKAGLSYSRGDRAGAIGLVKEGV-SFLFRPKPNKEAQKKAEEEKKSNADVIQFSGCRDNQTSADAIIDNQATGAMSHALISALSQNSNLTYTQLLKQLRDILKGKYSQIPQMSTGRPMDMNTLFVM 525          
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|1183379777|gb|ORY05241.1| (metacaspase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 121.709 bits (304), Expect = 2.346e-30
Identity = 62/128 (48.44%), Postives = 88/128 (68.75%), Query Frame = 0
Query:   17 SLANAGLAYLSGNKAVALMSGLEAVGTMLFGPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKIDLFSPFKM 144
            SL  AGL+Y  G+ A A+    + +G  L  P TN +A+++TEE  +S ADVIQF GCRDDQTSAD  I+ QATGA+S+AL+  L Q  +  Y Q+L+N+R +L+ KY+QIPQ+S+   +D+ + F M
Sbjct:  248 SLLKAGLSYSRGDTAGAMSLVKDGLG-FLMRPPTNKEAQKKTEETRKSNADVIQFAGCRDDQTSADATINNQATGAMSYALVTALGQNRSLTYTQLLQNLRDILKSKYSQIPQMSTGRPMDMKTMFAM 374          
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|1183366682|gb|ORX92922.1| (metacaspase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 119.398 bits (298), Expect = 6.913e-30
Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 0
Query:   17 SLANAGLAYLSGNKAVALMSGLEAVGTMLFGPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKIDLFSPFKM 144
            +L  AGL+Y  G+K  AL    E V + LF P  N +A+++ E+  +S ADVIQF GCRD QTSAD  ID +ATGA+S ALI  LSQ  N  Y Q+L+ +R +L+GKY+QIPQ+S+   +D+ + F M
Sbjct:  205 ALLKAGLSYSRGDKMGALGLVKEGV-SFLFKPPANAEAQKKAEQEKKSNADVIQFSGCRDSQTSADAIIDSKATGAMSHALITALSQNSNLTYTQLLQQLRDILKGKYSQIPQMSTGRPMDMNTLFTM 331          
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|1026265928|gb|OAC99088.1| (hypothetical protein MUCCIDRAFT_149095, partial [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 115.931 bits (289), Expect = 9.480e-29
Identity = 61/125 (48.80%), Postives = 85/125 (68.00%), Query Frame = 0
Query:   16 NSLANAGLAYLSGNKAVALMSGLEAVGTMLF--GPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKIDL 138
            ++L NAGLAY+SG+ + A+ S + ++G+ L   G   + + ++   +   SPADVI F GC+DDQTSAD    G+ATGA+SWA+   L Q  NQ Y Q+L N+RQLLR KY Q PQ+SSSH +D+
Sbjct:  173 SNLKNAGLAYVSGDPSRAI-SSVMSLGSRLLNGGFGQSEEKKKFLRQQKGSPADVIMFSGCKDDQTSADASEAGRATGAMSWAITTALRQNKNQSYLQLLNNIRQLLRQKYQQRPQLSSSHPMDM 296          
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|1105523193|emb|SGZ56698.1| (CIC11C00000000483 [[Candida] intermedia])

HSP 1 Score: 110.923 bits (276), Expect = 3.561e-28
Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = 0
Query:   24 AYLSGNKAVALMSGLEAVGTMLFGPKTNHD----ARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKID 137
            AY  G++   ++ G++     LF    N D    A   T++NN SPADVI   GC+DDQTSAD +  GQ+TGA+S+A I+VL+  P+Q Y  +L+NMR++LR KY+Q PQ+ SSH ID
Sbjct:   55 AYSKGDQG-GMIKGIKG----LFNTVVNKDKAQLASEYTKKNNTSPADVISLSGCKDDQTSADAKEQGQSTGAMSYAFIKVLANNPDQSYLTLLQNMREILRDKYSQKPQLCSSHPID 167          
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|1045442130|gb|OCF36254.1| (metacaspase-1 [Kwoniella heveanensis BCC8398] >gi|1045451516|gb|OCF45104.1| metacaspase-1 [Kwoniella heveanensis CBS 569])

HSP 1 Score: 116.316 bits (290), Expect = 7.666e-28
Identity = 58/120 (48.33%), Postives = 82/120 (68.33%), Query Frame = 0
Query:   18 LANAGLAYLSGNKAVALMSGLEAVGTMLFGPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKID 137
            L  AG++YL G+    ++ GL  +G  + G  +N DAR++T+E   SPADVI + GC+D QTSADT+  G+ATGA+S+A I  L++ P Q Y Q+L  +R  L+GKY Q PQ+S+SH ID
Sbjct:  350 LLGAGMSYLKGDTG-GMIKGLMGIGKNIIG--SNSDARQKTQETKTSPADVIMWSGCKDSQTSADTQEAGRATGAMSYAFIAALTRYPQQSYVQLLNTIRDELKGKYDQKPQLSASHPID 466          
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|1101823448|ref|XP_019014601.1| (metacaspase-1 [Kwoniella pini CBS 10737] >gi|1045459954|gb|OCF53382.1| metacaspase-1 [Kwoniella pini CBS 10737])

HSP 1 Score: 115.931 bits (289), Expect = 9.728e-28
Identity = 61/131 (46.56%), Postives = 86/131 (65.65%), Query Frame = 0
Query:    6 PTLLPVLQVVNSLANAGLAYLSGNKAVALMSGLEAVGTMLFGPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKI 136
            P LL   +    L  AG++YL G+    ++ GL  +G  L     N DAR+RT+E   SPADVI + GC+D QTSADT+  G+ATGA+S+A I  L++ P Q Y Q+LK +R  L+GKY+Q PQ+S+SH++
Sbjct:  326 PNLL--AEAGQGLLGAGMSYLKGDTG-GMIKGLMGLGKNLV--NQNSDARKRTQETKTSPADVIMWSGCKDSQTSADTQEAGKATGAMSYAFIAALTKYPQQSYVQLLKTIRDELKGKYSQKPQLSASHRM 451          
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|511004640|gb|EPB86005.1| (hypothetical protein HMPREF1544_07249 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 115.161 bits (287), Expect = 2.684e-27
Identity = 60/124 (48.39%), Postives = 84/124 (67.74%), Query Frame = 0
Query:   17 SLANAGLAYLSGNKAVALMSGLEAVGTMLF--GPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKIDL 138
            +L NAGLAY+SG+ + A+ S + ++G+ +   G   + + ++   +   SPADVI F GC+DDQTSAD    G+ATGA+SWA+   L Q  NQ Y Q+L N+RQLLR KY Q PQ+SSSH +D+
Sbjct:  360 NLKNAGLAYVSGDPSRAI-SSVMSLGSRILNGGFGQSEEKKKFLRQQKGSPADVIMFSGCKDDQTSADASEAGRATGAMSWAITTALRQNKNQSYLQLLNNIRQLLRQKYQQRPQLSSSHPMDM 482          
BLAST of EWM26392.1 vs. NCBI_GenBank
Match: gi|1183516146|gb|ORZ39364.1| (caspase domain-domain-containing protein [Catenaria anguillulae PL171])

HSP 1 Score: 113.235 bits (282), Expect = 4.385e-27
Identity = 57/117 (48.72%), Postives = 74/117 (63.25%), Query Frame = 0
Query:   22 GLAYLSGNKAVALMSGLEAVGTMLFGPKTNHDARRRTEENNQSPADVIQFGGCRDDQTSADTRIDGQATGALSWALIRVLSQGPNQDYAQVLKNMRQLLRGKYTQIPQISSSHKIDL 138
            G+  L+GNK  ALM   + +   L   K +    +R E+   S A VI F GC+D QTSAD  IDG ATGA+SWAL++ L   P Q Y QVL++ R LLR KY+QIPQ+SS H +D+
Sbjct:  276 GMQVLTGNKIGALMGAFK-MAKNLASAKGDERHMQRVEQEKTSRAQVIMFSGCKDSQTSADAHIDGSATGAMSWALLKSLRANPGQSYTQVLQSTRDLLRAKYSQIPQLSSGHMLDM 391          
The following BLAST results are available for this feature:
BLAST of EWM26392.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108407|gb|EWM26392.1|2.196e-102100.00putative caspase, partial [Nannochloropsis gaditan... [more]
gi|1183377084|gb|ORY02639.1|4.007e-3151.56hypothetical protein K493DRAFT_277186 [Basidiobolu... [more]
gi|1183379777|gb|ORY05241.1|2.346e-3048.44metacaspase [Basidiobolus meristosporus CBS 931.73... [more]
gi|1183366682|gb|ORX92922.1|6.913e-3049.22metacaspase [Basidiobolus meristosporus CBS 931.73... [more]
gi|1026265928|gb|OAC99088.1|9.480e-2948.80hypothetical protein MUCCIDRAFT_149095, partial [M... [more]
gi|1105523193|emb|SGZ56698.1|3.561e-2847.46CIC11C00000000483 [[Candida] intermedia][more]
gi|1045442130|gb|OCF36254.1|7.666e-2848.33metacaspase-1 [Kwoniella heveanensis BCC8398] >gi|... [more]
gi|1101823448|ref|XP_019014601.1|9.728e-2846.56metacaspase-1 [Kwoniella pini CBS 10737] >gi|10454... [more]
gi|511004640|gb|EPB86005.1|2.684e-2748.39hypothetical protein HMPREF1544_07249 [Mucor circi... [more]
gi|1183516146|gb|ORZ39364.1|4.385e-2748.72caspase domain-domain-containing protein [Catenari... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4288rna4288Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications