EWM26396.1, cds4277 (CDS) Nannochloropsis gaditana

Overview
NameEWM26396.1
Unique Namecds4277
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:187377..188305 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26396.1
Productcalcium-dependent metacaspase cdp ii
Partialtrue
Orig transcript idgnl|cribi|Naga_100365g1.932.mrna
GbkeyCDS
End range.
End range188305
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:187377..188305 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004197cysteine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR011600Pept_C14_caspase
IPR029030Caspase-like_dom
Homology
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|585108413|gb|EWM26396.1| (calcium-dependent metacaspase cdp ii, partial [Nannochloropsis gaditana])

HSP 1 Score: 597.816 bits (1540), Expect = 0.000e+0
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
Query:    1 MVYPGARFRKQLQEQQQQGPLSVSIPVASVQQPSQPPAPSLPQHGSHYPAAPRPPPSYAPVVAAPSAFQNYQSSSPRPQPQQPIIATAYAVPVQNGAFSGPGAYGHGPPIPSAPPLPPPSAPLPPPWPSTQAPTNLYTPVGGFVANNAVATPPPSQQGRPSSSLSSFAPPSGYQPPPRPAPSFPPSSSAAYRPPHRPPSSSPSPLPEGSTYQRPNDLHGALPFSSPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLVGGGSAWGQVR 309
            MVYPGARFRKQLQEQQQQGPLSVSIPVASVQQPSQPPAPSLPQHGSHYPAAPRPPPSYAPVVAAPSAFQNYQSSSPRPQPQQPIIATAYAVPVQNGAFSGPGAYGHGPPIPSAPPLPPPSAPLPPPWPSTQAPTNLYTPVGGFVANNAVATPPPSQQGRPSSSLSSFAPPSGYQPPPRPAPSFPPSSSAAYRPPHRPPSSSPSPLPEGSTYQRPNDLHGALPFSSPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLVGGGSAWGQVR
Sbjct:    1 MVYPGARFRKQLQEQQQQGPLSVSIPVASVQQPSQPPAPSLPQHGSHYPAAPRPPPSYAPVVAAPSAFQNYQSSSPRPQPQQPIIATAYAVPVQNGAFSGPGAYGHGPPIPSAPPLPPPSAPLPPPWPSTQAPTNLYTPVGGFVANNAVATPPPSQQGRPSSSLSSFAPPSGYQPPPRPAPSFPPSSSAAYRPPHRPPSSSPSPLPEGSTYQRPNDLHGALPFSSPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLVGGGSAWGQVR 309          
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|628824843|ref|XP_007762725.1| (hypothetical protein CONPUDRAFT_78523 [Coniophora puteana RWD-64-598 SS2] >gi|392596554|gb|EIW85876.1| hypothetical protein CONPUDRAFT_78523 [Coniophora puteana RWD-64-598 SS2])

HSP 1 Score: 103.605 bits (257), Expect = 3.520e-21
Identity = 90/312 (28.85%), Postives = 126/312 (40.38%), Query Frame = 0
Query:   48 YPAAPRPPPSYAPVV---AAPSAFQNYQSSSPRPQPQQPIIATAYAVPVQNGA-------FSGPGAYGHGPPIPSAPPLPPPSAPLPPPWPSTQAPTNLYTPVGGFVANNAVATPPPSQQGRPSSSLSSFAP-------PSG---------------YQPPPRPAPSFPPSSSAAYRPPHRPPSSSPSPLPE---GST------------------YQRPNDLHGALPFSSP-----CNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLVGG 301
            YP + RPP  Y PV       S  + + SSS RP+    +                     S  GA G      S   L PP +P+ P                G   + ++   P SQ+ RPS+S  + A        P+G               +  P  P  S  P+ +   R PHR  +S P   P    GST                     PN LH  LP  SP     C G +KAL +GI Y G + ELKGC+NDV+ +  F+ + +G+QP ++ +L DD       PT++N++ GM+WLV G
Sbjct:   11 YPNSARPPSPYTPVQPLGYTYSHHERHNSSSTRPRRHSDVPPPPPPKHHPTSGSTRHQPQTSANGATGAVHHFSSTHRLRPPPSPVIP----------------GITGSTSIHHTPSSQRLRPSTSTPAVAQLHPALHHPAGAGGVQRAKIRPQGVRFDVPETPVTSIRPTVNG--RHPHRRATSQPVVAPNAPSGSTPNSARAEPPRSASTPSSKTVHPNGLHSVLPAHSPLHYSKCTGTKKALLIGINYIGQKRELKGCINDVRKIREFLIKHWGYQPNDIVLLMDDTTHPRRMPTKKNMLDGMKWLVKG 304          
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|1183361120|gb|ORX88438.1| (hypothetical protein K493DRAFT_341283 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 102.834 bits (255), Expect = 5.261e-21
Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  222 PFSSPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLVGG 301
            P  S C+GRRKAL +GI Y GT AEL+GC+NDV N+  F+ + YGF+ ++M VLTDD       PTR NI  GM WLV G
Sbjct:  186 PMVSQCSGRRKALLIGINYFGTSAELRGCINDVNNIKKFLMQQYGFRTEDMVVLTDDQKDPRFQPTRANITSGMYWLVNG 265          
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|1183381572|gb|ORY06989.1| (hypothetical protein K493DRAFT_332938 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 101.679 bits (252), Expect = 2.322e-20
Identity = 42/80 (52.50%), Postives = 53/80 (66.25%), Query Frame = 0
Query:  222 PFSSPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLVGG 301
            P  S C+G RKAL +GI Y GT A+L+GC+NDV N+  F+   YGF+ Q+M +LTDD       PTR NI+ GM WLV G
Sbjct:  260 PMISQCSGNRKALLIGINYIGTSAQLRGCINDVHNMKRFLMEHYGFRSQDMVILTDDQRDPRFQPTRANIINGMNWLVNG 339          
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|1147414092|ref|XP_020077630.1| (Metacaspase-1 [Hyphopichia burtonii NRRL Y-1933] >gi|1064978554|gb|ODV68563.1| Metacaspase-1 [Hyphopichia burtonii NRRL Y-1933])

HSP 1 Score: 98.9821 bits (245), Expect = 7.419e-20
Identity = 54/137 (39.42%), Postives = 74/137 (54.01%), Query Frame = 0
Query:  168 APPSGYQ----PPPRPAPSFPPSSSAAYRPPHRPPSSSPSPLPE-GSTYQRPNDLHGALPFSSPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLV 299
            +P  GYQ    PPP           A Y+ P  PP S P    + G TYQ            S CNGR+KA+ VGI Y G++  L GC+NDVKN+  F+++ +G+   +M +LTDD       PT+QNI++ M+WLV
Sbjct:   57 SPNQGYQRPSAPPPLNHSQGGGGYQATYQRPMGPPPSVPQAFGQTGMTYQY-----------SACNGRKKAVLVGINYIGSKNALNGCINDVKNMSRFLNKRFGYSYDDMVILTDDQREMGRIPTKQNIIRAMQWLV 182          
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|511004640|gb|EPB86005.1| (hypothetical protein HMPREF1544_07249 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 99.7525 bits (247), Expect = 7.630e-20
Identity = 55/148 (37.16%), Postives = 75/148 (50.68%), Query Frame = 0
Query:  170 PSGYQPPPRPAPSFPPSS----SAAY-RPPHRPPSSSPSPLPEGSTYQRPNDLHGALPFS-------------SPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLV 299
            P  Y PPPR  P F P       A Y +PP+   + SP+P+P G      N     +                S C GR++AL +GI Y GT  ELKGC+NDV N+  F+ + Y F+  +M +LTDD       PT++NI+  M+WLV
Sbjct:  111 PQHYPPPPRQDPMFSPHDPTVAQANYPQPPYSNHNQSPNPVPYGQQQDNVNANDFVMHVDPKYRNMPPPNFQLSNCQGRKRALLIGINYFGTSNELKGCINDVHNIKTFLIQLYNFREADMVILTDDQSDPRHVPTKRNIIDAMQWLV 258          
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|1028526873|gb|OAJ00729.1| (hypothetical protein A4X13_g6558 [Tilletia indica])

HSP 1 Score: 99.3673 bits (246), Expect = 9.787e-20
Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 0
Query:  211 YQRPN--DLHGALPFS-SPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFS-EGTPTRQNIVQGMRWLVGGGS 303
            +QRP     HG + +  S  NG+RKAL +GI Y GTRAEL+GC NDV+N+  FI +  G++  +M +LTD PG      PTRQNI   M WL+ G S
Sbjct:  163 FQRPQGPQTHGNMTYEYSSMNGKRKALLIGINYVGTRAELRGCHNDVENMKNFIMQRAGYKTDDMVILTDKPGSDMRSIPTRQNITAAMNWLIRGAS 259          
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|1028546183|gb|OAJ16778.1| (hypothetical protein A4X09_g4105 [Tilletia walkeri])

HSP 1 Score: 99.3673 bits (246), Expect = 1.022e-19
Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 0
Query:  211 YQRPN--DLHGALPFS-SPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFS-EGTPTRQNIVQGMRWLVGGGS 303
            +QRP     HG + +  S  NG+RKAL +GI Y GTRAEL+GC NDV+N+  FI +  G++  +M +LTD PG      PTRQNI   M WL+ G S
Sbjct:  164 FQRPQGPQTHGNMTYEYSSMNGKRKALLIGINYVGTRAELRGCHNDVENMKNFIMQRAGYKTDDMVILTDKPGSDMRSIPTRQNITAAMNWLIRGAS 260          
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|648159334|gb|KDR73066.1| (hypothetical protein GALMADRAFT_252495 [Galerina marginata CBS 339.88])

HSP 1 Score: 99.3673 bits (246), Expect = 1.278e-19
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0
Query:  225 SPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLVGG 301
            S CNG++KAL VGI Y G + EL+GC+NDVKN+  F+   YG++ ++M +LTDD       PTR+NI+Q M+WLV G
Sbjct:  212 SQCNGKKKALCVGINYFGQQGELRGCINDVKNIQGFLISEYGYKREDMVILTDDATNPRMQPTRENIIQAMQWLVRG 288          
BLAST of EWM26396.1 vs. NCBI_GenBank
Match: gi|727141357|emb|CEG76260.1| (Putative Metacaspase-1A [Rhizopus microsporus])

HSP 1 Score: 95.9005 bits (237), Expect = 1.788e-19
Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  225 SPCNGRRKALFVGITYAGTRAELKGCVNDVKNLHAFIHRTYGFQPQEMRVLTDDPGFSEGTPTRQNIVQGMRWLV 299
            S C GR++AL +GI Y GT AELKGC+NDV N+  F+   Y F+ ++M +LTDD    +  PT+QN+++ M+WLV
Sbjct:  190 SNCQGRKRALLIGINYFGTSAELKGCINDVHNIKDFLITLYNFRLEDMVILTDDQQNPQNIPTKQNMIRAMQWLV 264          
The following BLAST results are available for this feature:
BLAST of EWM26396.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108413|gb|EWM26396.1|0.000e+0100.00calcium-dependent metacaspase cdp ii, partial [Nan... [more]
gi|628824843|ref|XP_007762725.1|3.520e-2128.85hypothetical protein CONPUDRAFT_78523 [Coniophora ... [more]
gi|1183361120|gb|ORX88438.1|5.261e-2155.00hypothetical protein K493DRAFT_341283 [Basidiobolu... [more]
gi|1183381572|gb|ORY06989.1|2.322e-2052.50hypothetical protein K493DRAFT_332938 [Basidiobolu... [more]
gi|1147414092|ref|XP_020077630.1|7.419e-2039.42Metacaspase-1 [Hyphopichia burtonii NRRL Y-1933] >... [more]
gi|511004640|gb|EPB86005.1|7.630e-2037.16hypothetical protein HMPREF1544_07249 [Mucor circi... [more]
gi|1028526873|gb|OAJ00729.1|9.787e-2048.45hypothetical protein A4X13_g6558 [Tilletia indica][more]
gi|1028546183|gb|OAJ16778.1|1.022e-1948.45hypothetical protein A4X09_g4105 [Tilletia walkeri... [more]
gi|648159334|gb|KDR73066.1|1.278e-1951.95hypothetical protein GALMADRAFT_252495 [Galerina m... [more]
gi|727141357|emb|CEG76260.1|1.788e-1949.33Putative Metacaspase-1A [Rhizopus microsporus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4287rna4287Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications