EWM26403.1, cds4270 (CDS) Nannochloropsis gaditana

Overview
NameEWM26403.1
Unique Namecds4270
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:169162..169377 +
Alignment locationCM002463.1:169503..169636 +
Alignment locationCM002463.1:169796..169927 +
Alignment locationCM002463.1:170181..170254 +
Alignment locationCM002463.1:170457..170764 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26403.1
Productubiquinone menaquinone biosynthesis methyltransferase-like protein
Orig transcript idgnl|cribi|Naga_100697g2.1311.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:169162..169377 +
CM002463.1supercontigCM002463.1:169503..169636 +
CM002463.1supercontigCM002463.1:169796..169927 +
CM002463.1supercontigCM002463.1:170181..170254 +
CM002463.1supercontigCM002463.1:170457..170764 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR013216Methyltransf_11
Homology
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|585108422|gb|EWM26403.1| (ubiquinone menaquinone biosynthesis methyltransferase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
Query:    1 MAWIAQDETRFRPRAAQASGEQARRPGKGEIDGLLEGKSEEALWPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287
            MAWIAQDETRFRPRAAQASGEQARRPGKGEIDGLLEGKSEEALWPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL
Sbjct:    1 MAWIAQDETRFRPRAAQASGEQARRPGKGEIDGLLEGKSEEALWPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287          
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|593705100|ref|XP_007152914.1| (hypothetical protein PHAVU_004G171000g [Phaseolus vulgaris] >gi|561026223|gb|ESW24908.1| hypothetical protein PHAVU_004G171000g [Phaseolus vulgaris])

HSP 1 Score: 220.705 bits (561), Expect = 3.357e-67
Identity = 113/279 (40.50%), Postives = 162/279 (58.06%), Query Frame = 0
Query:    9 TRFRPRAAQASGEQARRPGKGEIDGLLEGKSEEALWPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287
            ++F      +    AR  G   +D LL+    +  WPE  P + + DF R DET D+LFY+ P+ V HID  A+ +L+ YY + F          +   + ILD  +SWVSHFPP Y +              RV GLGM+ EEL  NP LTE+ VQDLN NP+LP+ D SFD++ + +++DYL +P+ + +EM R+L+PGG+  + FSNR F+TKA++ W    D DHV+ VA+Y HYA G             P A DISP+P + DP+Y+V++ +L
Sbjct:   58 SQFLTMGTNSFIASARIKGGPSVDELLK----DVDWPEQFP-FKEEDFQRFDETPDSLFYEAPRFVTHIDDPAIAALTKYYSKVFPP-------SNTPGVSILDTCSSWVSHFPPGYKQE-------------RVVGLGMNEEELKRNPVLTEYAVQDLNVNPKLPFEDNSFDIITNVVSVDYLTKPLDVFKEMCRILKPGGQAIMSFSNRCFWTKAISIWTSTGDADHVMIVASYFHYAGG----------FEPPQAVDISPNPGRSDPMYIVYSRKL 301          
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|971505446|dbj|GAQ92758.1| (S-adenosyl-L-methionine dependent methyltransferases [Klebsormidium nitens])

HSP 1 Score: 218.394 bits (555), Expect = 7.095e-67
Identity = 109/253 (43.08%), Postives = 153/253 (60.47%), Query Frame = 0
Query:   35 LEGKSEEALWPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287
            +E   +E  WPE  P +   DF R DET D  FY +P+ V HID  A+++L+ YY   F +        +   + +LD+ +SW+SHFPP+Y +              R+AGLG++  EL  N  LTEFTVQDLN NP+LPY D SFD++V+A+++DYL +P+ + +EM RVL+PGG   + FSNR F+TKA++ W G  DVDHV  V +Y HY  G             P A DISP+P + DP+YVV++ +L
Sbjct:   36 IEKALKEVDWPEEFP-FSAKDFERYDETPDTTFYSSPRFVTHIDDYAIKALTNYYASVFPQ-------SNTPGIAVLDLCSSWISHFPPNYKQE-------------RIAGLGLNEAELKENKVLTEFTVQDLNVNPKLPYEDNSFDVIVNAVSVDYLKKPLEIFKEMHRVLKPGGLCAMSFSNRCFWTKAISIWTGTSDVDHVYIVGSYFHYTGG----------FEAPQALDISPNPGRSDPMYVVYSRKL 257          
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|1021520916|ref|XP_016203838.1| (uncharacterized protein LOC107644486 isoform X2 [Arachis ipaensis])

HSP 1 Score: 217.238 bits (552), Expect = 1.500e-66
Identity = 107/244 (43.85%), Postives = 146/244 (59.84%), Query Frame = 0
Query:   44 WPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287
            WPE  P +   DF R DE+ DALFYD P+ V HID  A+ +L+ YY E F          +   + ILD+ +SWVSHFPP Y +              RV GLGM+ EEL  NP LTE+ VQDLN NP+LP+ D SFD++ + +++DYL +P+ + +EM R+L+PGG   + FSNR F+TKA++ W    D DHV+ V  Y HYA G             P A DISP+P + DP+Y+V++ +L
Sbjct:   44 WPEQFP-FKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSEVFPP-------SNTPGVSILDMCSSWVSHFPPGYKQE-------------RVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDNSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG----------FEPPQAVDISPNPGRSDPMYIVYSRKL 256          
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|641838800|gb|KDO57738.1| (hypothetical protein CISIN_1g021661mg [Citrus sinensis])

HSP 1 Score: 217.624 bits (553), Expect = 6.031e-66
Identity = 110/254 (43.31%), Postives = 153/254 (60.24%), Query Frame = 0
Query:   33 GLLEGKSEEALWPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADR 286
            G +E   ++  WPE  P + + DF R DE+ D+LFY+TP+ V HID  A+ +L+ YY E F          +   + ILD+ +SWVSHFPP Y        QD      R+ G+GM+ EEL  NP LTE+ VQDLN NP+LP+ D SFD++ + +++DYL +PI + +EM +VL+PGG   V FSNR F+TKA++ W    D DHV+ V  Y HYA G             P A DISP+P + DP+YVV++ +
Sbjct:   83 GAVEQVLKDVQWPEQFP-FKEEDFQRFDESPDSLFYETPRFVTHIDDPAIAALTKYYSEVFPP-------SNTPGVSILDLCSSWVSHFPPGYK-------QD------RIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG----------YEPPQAVDISPNPGRSDPMYVVYSRK 305          
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|950926664|ref|XP_014515604.1| (PREDICTED: uncharacterized protein LOC106773396 [Vigna radiata var. radiata])

HSP 1 Score: 217.624 bits (553), Expect = 6.829e-66
Identity = 110/266 (41.35%), Postives = 155/266 (58.27%), Query Frame = 0
Query:   22 QARRPGKGEIDGLLEGKSEEALWPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287
             A+  G   +D LL+       WPE  P + + DF R DET D+LFY+ P+ V HID  A+ +L+ YY + F          +   + ILD+ +SWVSHFPP Y +              RV GLGM+  EL  NP LTE+ VQDLN NP+LP+ D SFD++ + +++DYL +P+ + +EM RVL+PGG   + FSNR F+TKA++ W    D DHV+ V +Y HYA G             P A DISP+P + DP+Y+V++ +L
Sbjct:   78 SAKITGGSSVDELLKNYE----WPEQFP-FKEEDFQRFDETPDSLFYEAPRFVTHIDDPAIAALTKYYSKVFPP-------SNTPGVSILDMCSSWVSHFPPGYKQE-------------RVVGLGMNEAELKRNPVLTEYAVQDLNVNPKLPFEDNSFDIITNVVSVDYLTKPLDVFKEMSRVLKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIVGSYFHYAGG----------FEPPQAVDISPNPGRSDPMYIVYSRKL 308          
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|1044545193|ref|XP_017438703.1| (PREDICTED: uncharacterized protein LOC108344737 [Vigna angularis])

HSP 1 Score: 216.853 bits (551), Expect = 1.336e-65
Identity = 110/266 (41.35%), Postives = 155/266 (58.27%), Query Frame = 0
Query:   22 QARRPGKGEIDGLLEGKSEEALWPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287
             A+  G   +D LL+       WPE  P +   DF R DET D+LFY+ P+ V HID  A+ +L+ YY + F          +   + ILD+ +SWVSHFPP Y +              RV GLGM+ EEL  NP LTE+ V+DLN NP+LP+ D SFD++ + +++DYL +P+ + +EM RVL+PGG   + FSNR F+TKA++ W    D DHV+ V +Y HYA G             P A DISP+P + DP+Y+V++ +L
Sbjct:   78 SAKITGGSSVDELLKNYE----WPEQFP-FKDEDFQRFDETPDSLFYEAPRFVTHIDDPAIAALTKYYSKVFPP-------SNTPGVSILDMCSSWVSHFPPGYKQE-------------RVVGLGMNEEELNRNPVLTEYAVKDLNVNPKLPFEDNSFDIITNVVSVDYLTKPLDVFKEMSRVLKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIVGSYFHYAGG----------FEPPQAVDISPNPGRSDPMYIVYSRKL 308          
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|1021520914|ref|XP_016203837.1| (uncharacterized protein LOC107644486 isoform X1 [Arachis ipaensis])

HSP 1 Score: 217.238 bits (552), Expect = 2.073e-65
Identity = 107/244 (43.85%), Postives = 146/244 (59.84%), Query Frame = 0
Query:   44 WPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287
            WPE  P +   DF R DE+ DALFYD P+ V HID  A+ +L+ YY E F          +   + ILD+ +SWVSHFPP Y +              RV GLGM+ EEL  NP LTE+ VQDLN NP+LP+ D SFD++ + +++DYL +P+ + +EM R+L+PGG   + FSNR F+TKA++ W    D DHV+ V  Y HYA G             P A DISP+P + DP+Y+V++ +L
Sbjct:  126 WPEQFP-FKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSEVFPP-------SNTPGVSILDMCSSWVSHFPPGYKQE-------------RVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDNSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG----------FEPPQAVDISPNPGRSDPMYIVYSRKL 338          
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|1012173730|ref|XP_015966394.1| (uncharacterized protein LOC107490140 isoform X2 [Arachis duranensis])

HSP 1 Score: 214.542 bits (545), Expect = 2.286e-65
Identity = 106/244 (43.44%), Postives = 145/244 (59.43%), Query Frame = 0
Query:   44 WPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287
            WPE  P +   DF R DE+ DALFYD P+ V HID  A+ +L+ YY   F          +   + ILD+ +SWVSHFPP Y +              RV GLGM+ EEL  NP LTE+ VQDLN NP+LP+ D SFD++ + +++DYL +P+ + +EM R+L+PGG   + FSNR F+TKA++ W    D DHV+ V  Y HYA G             P A DISP+P + DP+Y+V++ +L
Sbjct:   44 WPEQFP-FKDEDFQRFDESSDALFYDAPRFVTHIDDPAIAALTKYYSVVFPP-------SNTPGVSILDMCSSWVSHFPPGYKQE-------------RVVGLGMNEEELKRNPVLTEYVVQDLNVNPKLPFEDSSFDVITNVVSVDYLTKPLDVFKEMRRILKPGGLAIMSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGG----------FEPPQAVDISPNPGRSDPMYIVYSRKL 256          
BLAST of EWM26403.1 vs. NCBI_GenBank
Match: gi|1021029769|gb|KZM87554.1| (hypothetical protein DCAR_024684 [Daucus carota subsp. sativus])

HSP 1 Score: 213.386 bits (542), Expect = 3.305e-65
Identity = 106/260 (40.77%), Postives = 153/260 (58.85%), Query Frame = 0
Query:   28 KGEIDGLLEGKSEEALWPEPLPPYVKSDFARLDETDDALFYDTPKLVEHIDKAAVRSLSAYYRETFQEVGDRLYGESGRLLDILDVGASWVSHFPPSYTRAQEADGQDPLGMRCRVAGLGMSAEELALNPQLTEFTVQDLNKNPRLPYADGSFDLVVSALTIDYLVRPITLCREMGRVLRPGGRVCVLFSNRLFFTKAVANWAGKDDVDHVLDVATYLHYANGESGSGVGEKMLSKPHAKDISPSPTKGDPLYVVWADRL 287
            K E+D +LE       WPE  P + + DF R DE+ D +FYD P+ V HID  A+ +L+ YY + F          +   + ILD+ +SWVSHFP  Y +              R+AG+G++ EEL  NP LTE+ VQDLN NPRLP+ + SFD++ + +++DYL +P+ + +EM RVL+P G   + FSNR F+TKA++ W    D DHV+ V +Y HYA G             P A DISP+P + DP+Y+V++ +L
Sbjct:   17 KSEVDKILENVE----WPEQFP-FKEEDFQRFDESPDTVFYDAPRFVTHIDDPAIAALTKYYSQVFPP-------SNTPGIAILDMCSSWVSHFPAGYKQE-------------RIAGMGLNDEELKRNPVLTEYVVQDLNTNPRLPFEENSFDVITNVVSVDYLTKPLDVFKEMNRVLKPDGLAIMSFSNRCFWTKAISIWTSTSDADHVMIVGSYFHYAGG----------FEPPKAMDISPNPGRTDPMYIVYSKKL 241          
The following BLAST results are available for this feature:
BLAST of EWM26403.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108422|gb|EWM26403.1|0.000e+0100.00ubiquinone menaquinone biosynthesis methyltransfer... [more]
gi|593705100|ref|XP_007152914.1|3.357e-6740.50hypothetical protein PHAVU_004G171000g [Phaseolus ... [more]
gi|971505446|dbj|GAQ92758.1|7.095e-6743.08S-adenosyl-L-methionine dependent methyltransferas... [more]
gi|1021520916|ref|XP_016203838.1|1.500e-6643.85uncharacterized protein LOC107644486 isoform X2 [A... [more]
gi|641838800|gb|KDO57738.1|6.031e-6643.31hypothetical protein CISIN_1g021661mg [Citrus sine... [more]
gi|950926664|ref|XP_014515604.1|6.829e-6641.35PREDICTED: uncharacterized protein LOC106773396 [V... [more]
gi|1044545193|ref|XP_017438703.1|1.336e-6541.35PREDICTED: uncharacterized protein LOC108344737 [V... [more]
gi|1021520914|ref|XP_016203837.1|2.073e-6543.85uncharacterized protein LOC107644486 isoform X1 [A... [more]
gi|1012173730|ref|XP_015966394.1|2.286e-6543.44uncharacterized protein LOC107490140 isoform X2 [A... [more]
gi|1021029769|gb|KZM87554.1|3.305e-6540.77hypothetical protein DCAR_024684 [Daucus carota su... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4280rna4280Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications