EWM26409.1, cds4265 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|585108435|gb|EWM26409.1| (Ribosome-associated, Iojap [Nannochloropsis gaditana]) HSP 1 Score: 582.793 bits (1501), Expect = 0.000e+0 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
Query: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNGEEVDLSHILRPNLPPGSEGGREGGREGDGPGPDPSLMEDAFWS 286
MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNGEEVDLSHILRPNLPPGSEGGREGGREGDGPGPDPSLMEDAFWS
Sbjct: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNGEEVDLSHILRPNLPPGSEGGREGGREGDGPGPDPSLMEDAFWS 286
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|585108436|gb|EWM26410.1| (Ribosome-associated, Iojap [Nannochloropsis gaditana]) HSP 1 Score: 494.197 bits (1271), Expect = 4.034e-175 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
Query: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKN 242
MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKN
Sbjct: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKN 242
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|553193987|ref|XP_005855870.1| (iojap-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293195|gb|EKU20495.1| iojap-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 374.4 bits (960), Expect = 1.883e-129 Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0
Query: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIA 186
MLSFSRTRTASQRRIDGDISPP TTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIA
Sbjct: 1 MLSFSRTRTASQRRIDGDISPPNTTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIA 186
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|551674566|ref|XP_005840038.1| (hypothetical protein GUITHDRAFT_161153 [Guillardia theta CCMP2712] >gi|428184202|gb|EKX53058.1| hypothetical protein GUITHDRAFT_161153 [Guillardia theta CCMP2712]) HSP 1 Score: 134.806 bits (338), Expect = 5.660e-35 Identity = 65/125 (52.00%), Postives = 87/125 (69.60%), Query Frame = 0
Query: 131 PLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNGEEVDLSHILRPN 255
PLAED +LP+++ I A D RK E + A RVS LT + FF+ G+SRP +QAIA +E+ M EK+G E++ +G DSGWILLDYG V+VN+MT AR+FY LE+ W+NGE V L ++ PN
Sbjct: 58 PLAEDPSLPLVQDIIRAMDERKAESIWAARVSHLTYSTEFFINCQGSSRPMLQAIAANVEDIMNEKYGREIK--WQGNPDSGWILLDYGEVIVNIMTAAAREFYDLEEHWQNGELVPLEDLVTPN 180
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|299472319|emb|CBN77507.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 129.798 bits (325), Expect = 1.131e-33 Identity = 61/126 (48.41%), Postives = 86/126 (68.25%), Query Frame = 0
Query: 132 LAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNGEEVDLSHILRPNLP 257
+ +D TLP + T AAD RK +++A+RV+ LT ++ F V++ GNSRPQ QAIA IEE M E H + + +G +SGWILLDYG ++V++MTP +R +Y LE W NGE V L +L+PN+P
Sbjct: 32 MEDDPTLPEVLTAVKAADERKAGNIVAIRVATLTVMTEFMVVLEGNSRPQNQAIAQNIEEKMEEMH--QRKTKSQGAPESGWILLDYGDIIVHIMTPKSRSYYDLESFWSNGERVPLDGVLKPNVP 155
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|1210524500|dbj|GAX16758.1| (hypothetical protein FisN_21Hh205 [Fistulifera solaris]) HSP 1 Score: 132.109 bits (331), Expect = 1.193e-33 Identity = 98/267 (36.70%), Postives = 143/267 (53.56%), Query Frame = 0
Query: 29 SVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRRE--EALDGMKVGHRFEMGYDIEEETVPLAEDETL-PVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGG----EGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKN--GEEVDLSHILRPNLPPGSEGGREGGREGDGPGPDPSLMEDAFWS 286
SVLL L+ LY + E A+ L DR L P SS S+N P+ K G E + + + + E +D ++ M + ++ + DETL P++E I AAD RK ED++AL+V+ ++T++S V+VSGNSRPQ QAIA AI D+ ++ G R GG EG+A+SGWILLDYGSV+V++MTP +R +Y +E WK G ++ ++L PN G D +P+ +D FWS
Sbjct: 4 SVLLQLVFLYASDEVEAWSLA-----------DR------LTGRVPSSSRNGHRSHNYPRYGKVDDGNSELQSTSTKHDKREMIDFIQ----EPMSSTVGDDKYSINTDETLLPLLECIVKAADGRKAEDIVALQVNHVSTLTSVLVIVSGNSRPQNQAIAAAITRDVQDELGQ--RPGGNGVPEGSAESGWILLDYGSVMVHIMTPKSRLYYNVEGQWKEKGGVATNIDYLLIPNQVVGRR---------DDAKMEPAPEDDPFWS 238
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|1072227598|gb|OEU12337.1| (DUF143-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 129.798 bits (325), Expect = 2.159e-33 Identity = 77/168 (45.83%), Postives = 109/168 (64.88%), Query Frame = 0
Query: 126 EEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGG--EGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKN--GEEVDLSHILRPNLPPG--SEGGREGGREGD-GPGPDPSLMEDAFWS 286
+E VP +DE ++ I AD RK ++++A+RVS+++TV+SF V+V+GNSRPQ QAIA I++D+ E+ L G EG+ADSGW LLDYGSV+V+VMTP +R FY +E WK+ GE +D++ + PN P + +EG EG+ G S ED FWS
Sbjct: 17 DEILVPPEQDELAELVRCIVRGADGRKADNIVAMRVSKISTVTSFVVIVTGNSRPQNQAIAAVIKDDVNEEFALLPGATGVPEGSADSGWTLLDYGSVMVHVMTPKSRLFYNIEGKWKDQGGEIMDITAAILPNAPTAEQQKQQQEGKSEGESGTMQGLSEEEDPFWS 184
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|873222368|emb|CEM31303.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 125.176 bits (313), Expect = 1.608e-31 Identity = 66/161 (40.99%), Postives = 99/161 (61.49%), Query Frame = 0
Query: 131 PLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKN--GEEVDLSHILRPNLPPGSEGGRE---GGREGDGPGPDPSLMEDAFWS 286
P++ D +P I TIA A D+ K + + A+RV + V+ F VL+ G+S PQ +AIA AIE+ M KHG+E + +G+ D GW++LDYGS++VN+MTP R++Y +E W+ E V L+H+LR ++ G GR+ GG P + + D FWS
Sbjct: 33 PVSHDPQVPTIYTIAEAGDLHKADGISAMRVKYCSDVTDFIVLMHGHSVPQNKAIANAIEDAMARKHGIEAKR-RDGSVDGGWLVLDYGSILVNIMTPKKREYYNMEGHWRKQGSEPVPLAHVLRSDVREGYSTGRDVTYGGGNRQQPWEEEEV--DPFWS 190
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|1210530962|dbj|GAX10502.1| (hypothetical protein FisN_21Lh205 [Fistulifera solaris]) HSP 1 Score: 123.635 bits (309), Expect = 2.012e-30 Identity = 73/173 (42.20%), Postives = 108/173 (62.43%), Query Frame = 0
Query: 121 MGYDIEEETVPLAEDETL-PVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGG----EGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKN--GEEVDLSHILRPNLPPGSEGGREGGREGDGPGPDPSLMEDAFWS 286
M + ++ + DETL P++E I AAD RK ED++AL+V+ ++T++S V+VSGNSRPQ QAIA AI D+ ++ G R GG EG+A+SGWILLDYG+V+V++MTP +R +Y +E WK G +++ ++L PN G D +P+ +D FWS
Sbjct: 77 MSSTVGDDEYSINTDETLLPLLECIVKAADGRKAEDIVALQVNHVSTLTSVLVIVSGNSRPQNQAIAAAITRDVQDELGQ--RPGGNGVPEGSAESGWILLDYGNVMVHIMTPKSRLYYNVEGQWKEKGGVAMNIDYLLIPNQVIGKR---------DDAKMEPAPEDDPFWS 238
BLAST of EWM26409.1 vs. NCBI_GenBank
Match: gi|224006702|ref|XP_002292311.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220971953|gb|EED90286.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 107.842 bits (268), Expect = 5.523e-26 Identity = 55/100 (55.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query: 144 IASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKH-GLEVRNGG--EGTADSGWILLDYGSVVVNVMTPVARKFYALEKLW 240
I +ADMRK D++ALRV+ T++++F V+VSG SRPQ QAIA +I +D+ EK+ G G EG+ADSGWILLDYG V+V+VMTP +R FY +E W
Sbjct: 1 IVHSADMRKASDIVALRVTSCTSLTNFVVIVSGTSRPQNQAIANSIAKDVEEKYDGKRCLGKGVPEGSADSGWILLDYGEVMVHVMTPKSRLFYDIEGQW 100 The following BLAST results are available for this feature:
BLAST of EWM26409.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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