EWM26410.1, cds4264 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|585108436|gb|EWM26410.1| (Ribosome-associated, Iojap [Nannochloropsis gaditana]) HSP 1 Score: 594.349 bits (1531), Expect = 0.000e+0 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
Query: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSVLPSLLSLLLPSLPPSRPLPFPPFFFPSFLPLSFPPLHSILYSGTD 295
MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSVLPSLLSLLLPSLPPSRPLPFPPFFFPSFLPLSFPPLHSILYSGTD
Sbjct: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSVLPSLLSLLLPSLPPSRPLPFPPFFFPSFLPLSFPPLHSILYSGTD 295
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|585108435|gb|EWM26409.1| (Ribosome-associated, Iojap [Nannochloropsis gaditana]) HSP 1 Score: 494.967 bits (1273), Expect = 1.789e-175 Identity = 248/264 (93.94%), Postives = 251/264 (95.08%), Query Frame = 0
Query: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSVLPSLLSLLLPSLPP 264
MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKN + L +L P+LPP
Sbjct: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNGEEV------DLSHILRPNLPP 258
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|553193987|ref|XP_005855870.1| (iojap-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293195|gb|EKU20495.1| iojap-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 373.629 bits (958), Expect = 4.167e-129 Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0
Query: 1 MLSFSRTRTASQRRIDGDISPPITTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIA 186
MLSFSRTRTASQRRIDGDISPP TTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIA
Sbjct: 1 MLSFSRTRTASQRRIDGDISPPNTTFTTSVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGREGYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIA 186
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|1210524500|dbj|GAX16758.1| (hypothetical protein FisN_21Hh205 [Fistulifera solaris]) HSP 1 Score: 129.413 bits (324), Expect = 1.581e-32 Identity = 88/229 (38.43%), Postives = 127/229 (55.46%), Query Frame = 0
Query: 29 SVLLFLLALYPAPETSAFFLPSPICQSPASYIDRTGSAWSLVSPRPQSSLYSSESNNTPQRPKQKKGGRE--GYNRNRRREEALDGMKVGHRFEMGYDIEEETVPLAEDETL-PVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGG----EGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSV 250
SVLL L+ LY + E A+ L DR L P SS S+N P+ K G E + + E +D ++ M + ++ + DETL P++E I AAD RK ED++AL+V+ ++T++S V+VSGNSRPQ QAIA AI D+ ++ G R GG EG+A+SGWILLDYGSV+V++MTP +R +Y +E WK G + ++
Sbjct: 4 SVLLQLVFLYASDEVEAWSLA-----------DR------LTGRVPSSSRNGHRSHNYPRYGKVDDGNSELQSTSTKHDKREMIDFIQ----EPMSSTVGDDKYSINTDETLLPLLECIVKAADGRKAEDIVALQVNHVSTLTSVLVIVSGNSRPQNQAIAAAITRDVQDELGQ--RPGGNGVPEGSAESGWILLDYGSVMVHIMTPKSRLYYNVEGQWKEKGGVATNI 209
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|551674566|ref|XP_005840038.1| (hypothetical protein GUITHDRAFT_161153 [Guillardia theta CCMP2712] >gi|428184202|gb|EKX53058.1| hypothetical protein GUITHDRAFT_161153 [Guillardia theta CCMP2712]) HSP 1 Score: 125.561 bits (314), Expect = 2.396e-31 Identity = 66/138 (47.83%), Postives = 90/138 (65.22%), Query Frame = 0
Query: 131 PLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSVLPSLLSLLLPSLPPSRPL 268
PLAED +LP+++ I A D RK E + A RVS LT + FF+ G+SRP +QAIA +E+ M EK+G E++ +G DSGWILLDYG V+VN+MT AR+FY LE+ W+N G L P L L+ P+ + P+
Sbjct: 58 PLAEDPSLPLVQDIIRAMDERKAESIWAARVSHLTYSTEFFINCQGSSRPMLQAIAANVEDIMNEKYGREIK--WQGNPDSGWILLDYGEVIVNIMTAAAREFYDLEEHWQN-GELVP-----LEDLVTPNSQSTSPV 187
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|1072227598|gb|OEU12337.1| (DUF143-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 120.553 bits (301), Expect = 1.028e-29 Identity = 64/143 (44.76%), Postives = 95/143 (66.43%), Query Frame = 0
Query: 126 EEETVPLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGG--EGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSVLPSLLSLLLPSLPPSR 266
+E VP +DE ++ I AD RK ++++A+RVS+++TV+SF V+V+GNSRPQ QAIA I++D+ E+ L G EG+ADSGW LLDYGSV+V+VMTP +R FY +E WK+ G + + + +LP+ P +
Sbjct: 17 DEILVPPEQDELAELVRCIVRGADGRKADNIVAMRVSKISTVTSFVVIVTGNSRPQNQAIAAVIKDDVNEEFALLPGATGVPEGSADSGWTLLDYGSVMVHVMTPKSRLFYNIEGKWKDQGGE----IMDITAAILPNAPTAE 155
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|1210530962|dbj|GAX10502.1| (hypothetical protein FisN_21Lh205 [Fistulifera solaris]) HSP 1 Score: 119.783 bits (299), Expect = 6.188e-29 Identity = 63/135 (46.67%), Postives = 93/135 (68.89%), Query Frame = 0
Query: 121 MGYDIEEETVPLAEDETL-PVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGG----EGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSV 250
M + ++ + DETL P++E I AAD RK ED++AL+V+ ++T++S V+VSGNSRPQ QAIA AI D+ ++ G R GG EG+A+SGWILLDYG+V+V++MTP +R +Y +E WK G + ++
Sbjct: 77 MSSTVGDDEYSINTDETLLPLLECIVKAADGRKAEDIVALQVNHVSTLTSVLVIVSGNSRPQNQAIAAAITRDVQDELGQ--RPGGNGVPEGSAESGWILLDYGNVMVHIMTPKSRLYYNVEGQWKEKGGVAMNI 209
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|873222368|emb|CEM31303.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 115.931 bits (289), Expect = 5.452e-28 Identity = 55/140 (39.29%), Postives = 86/140 (61.43%), Query Frame = 0
Query: 131 PLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSVLPSLLSLLLPSLPPSRPLPF 270
P++ D +P I TIA A D+ K + + A+RV + V+ F VL+ G+S PQ +AIA AIE+ M KHG+E + +G+ D GW++LDYGS++VN+MTP R++Y +E W+ G+ P + L S + R + +
Sbjct: 33 PVSHDPQVPTIYTIAEAGDLHKADGISAMRVKYCSDVTDFIVLMHGHSVPQNKAIANAIEDAMARKHGIEAKR-RDGSVDGGWLVLDYGSILVNIMTPKKREYYNMEGHWRKQGSEPVPLAHVLRSDVREGYSTGRDVTY 171
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|299472319|emb|CBN77507.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.775 bits (286), Expect = 1.039e-27 Identity = 58/132 (43.94%), Postives = 85/132 (64.39%), Query Frame = 0
Query: 132 LAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNVGALPPSVLPSLLSLLLPSLP 263
+ +D TLP + T AAD RK +++A+RV+ LT ++ F V++ GNSRPQ QAIA IEE M E H + ++ +G +SGWILLDYG ++V++MTP +R +Y LE W N +P L +L P++P
Sbjct: 32 MEDDPTLPEVLTAVKAADERKAGNIVAIRVATLTVMTEFMVVLEGNSRPQNQAIAQNIEEKMEEMHQRKTKS--QGAPESGWILLDYGDIIVHIMTPKSRSYYDLESFWSNGERVP------LDGVLKPNVP 155
BLAST of EWM26410.1 vs. NCBI_GenBank
Match: gi|224006702|ref|XP_002292311.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220971953|gb|EED90286.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 108.997 bits (271), Expect = 2.331e-26 Identity = 55/100 (55.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query: 144 IASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKH-GLEVRNGG--EGTADSGWILLDYGSVVVNVMTPVARKFYALEKLW 240
I +ADMRK D++ALRV+ T++++F V+VSG SRPQ QAIA +I +D+ EK+ G G EG+ADSGWILLDYG V+V+VMTP +R FY +E W
Sbjct: 1 IVHSADMRKASDIVALRVTSCTSLTNFVVIVSGTSRPQNQAIANSIAKDVEEKYDGKRCLGKGVPEGSADSGWILLDYGEVMVHVMTPKSRLFYDIEGQW 100 The following BLAST results are available for this feature:
BLAST of EWM26410.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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