EWM26425.1, cds4248 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|585108464|gb|EWM26425.1| (protein transport protein sec23a [Nannochloropsis gaditana]) HSP 1 Score: 267.7 bits (683), Expect = 8.703e-91 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
Query: 1 MGYCGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGGERREGGGEGCLWATGQGWRRRVEESG 131
MGYCGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGGERREGGGEGCLWATGQGWRRRVEESG
Sbjct: 1 MGYCGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGGERREGGGEGCLWATGQGWRRRVEESG 131
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|589277330|ref|XP_007004395.1| (hypothetical protein TREMEDRAFT_71580 [Tremella mesenterica DSM 1558] >gi|392577168|gb|EIW70298.1| hypothetical protein TREMEDRAFT_71580 [Tremella mesenterica DSM 1558]) HSP 1 Score: 120.553 bits (301), Expect = 3.557e-29 Identity = 56/93 (60.22%), Postives = 70/93 (75.27%), Query Frame = 0
Query: 6 PPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQP 98
PP+FL VVDTC+D+ EL+ L+++L L LLP TALVGLITFGT MVHEL +DC +SYVFRGSKEY P+++ D+L + P R QA GQP
Sbjct: 125 PPIFLYVVDTCVDEDELKALRETLVVSLSLLPPTALVGLITFGTMTMVHELAYSDCPKSYVFRGSKEYQPKQIADMLGLNPSNRMQAVRPGQP 217
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|1009365328|gb|KYM90359.1| (Protein transport protein Sec23A [Atta colombica]) HSP 1 Score: 117.857 bits (294), Expect = 3.992e-28 Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 0
Query: 4 CGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGG 105
C PP+FLLVVDTCLDD EL LKDSLQ L LLP AL+GLITFG V VHEL C++SYVFRG+K+ P++VQD+L I P+ GQ P QP RG G
Sbjct: 126 CLPPIFLLVVDTCLDDEELGALKDSLQMSLSLLPSNALIGLITFGKMVQVHELGCDGCSKSYVFRGTKDLQPKQVQDMLGIGRPIPGQNP--NQP---RGSG 222
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|1009413371|gb|KYN32271.1| (Protein transport protein Sec23A [Trachymyrmex septentrionalis]) HSP 1 Score: 117.472 bits (293), Expect = 4.226e-28 Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 0
Query: 4 CGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGG 105
C PP+FLLVVDTCLDD EL LKDSLQ L LLP AL+GLITFG V VHEL C++SYVFRG+K+ P++VQD+L I P+ GQ P QP RG G
Sbjct: 126 CLPPIFLLVVDTCLDDEELGALKDSLQMSLSLLPSNALIGLITFGKMVQVHELGCDGCSKSYVFRGTKDLQPKQVQDMLGIGRPIPGQNP--NQP---RGSG 222
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|1069673831|ref|XP_018318367.1| (PREDICTED: protein transport protein Sec23A [Trachymyrmex zeteki]) HSP 1 Score: 117.472 bits (293), Expect = 4.330e-28 Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 0
Query: 4 CGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGG 105
C PP+FLLVVDTCLDD EL LKDSLQ L LLP AL+GLITFG V VHEL C++SYVFRG+K+ P++VQD+L I P+ GQ P QP RG G
Sbjct: 126 CLPPIFLLVVDTCLDDEELGALKDSLQMSLSLLPSNALIGLITFGKMVQVHELGCDGCSKSYVFRGTKDLQPKQVQDMLGIGRPIPGQNP--NQP---RGSG 222
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|815893450|ref|XP_012243471.1| (PREDICTED: protein transport protein Sec23A [Bombus impatiens]) HSP 1 Score: 117.472 bits (293), Expect = 4.330e-28 Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 0
Query: 4 CGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPG 94
C PP+FLLVVDTC+DD EL LKDSLQ L LLP AL+GLITFG V VHEL C++SYVFRG+K+ P++VQD+L I PM GQ P
Sbjct: 126 CLPPIFLLVVDTCMDDEELGSLKDSLQMSLSLLPSNALIGLITFGRMVQVHELGCEGCSKSYVFRGTKDLQPKQVQDMLGIGRPMPGQNPN 216
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|332030321|gb|EGI70064.1| (Protein transport protein Sec23A [Acromyrmex echinatior]) HSP 1 Score: 117.472 bits (293), Expect = 4.381e-28 Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 0
Query: 4 CGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGG 105
C PP+FLLVVDTCLDD EL LKDSLQ L LLP AL+GLITFG V VHEL C++SYVFRG+K+ P++VQD+L I P+ GQ P QP RG G
Sbjct: 133 CLPPIFLLVVDTCLDDEELGALKDSLQMSLSLLPSNALIGLITFGKMVQVHELGCDGCSKSYVFRGTKDLQPKQVQDMLGIGRPIPGQNP--NQP---RGSG 229
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|1070200042|ref|XP_018369517.1| (PREDICTED: protein transport protein Sec23A [Trachymyrmex cornetzi] >gi|1009394085|gb|KYN15158.1| Protein transport protein Sec23A [Trachymyrmex cornetzi]) HSP 1 Score: 117.472 bits (293), Expect = 4.679e-28 Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 0
Query: 4 CGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGG 105
C PP+FLLVVDTCLDD EL LKDSLQ L LLP AL+GLITFG V VHEL C++SYVFRG+K+ P++VQD+L I P+ GQ P QP RG G
Sbjct: 126 CLPPIFLLVVDTCLDDEELGALKDSLQMSLSLLPSNALIGLITFGKMVQVHELGCDGCSKSYVFRGTKDLQPKQVQDMLGIGRPIPGQNP--NQP---RGSG 222
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|746833593|ref|XP_011064305.1| (PREDICTED: protein transport protein Sec23A [Acromyrmex echinatior] >gi|801382897|ref|XP_012054580.1| PREDICTED: protein transport protein Sec23A [Atta cephalotes] >gi|1068382888|ref|XP_018058916.1| PREDICTED: protein transport protein Sec23A [Atta colombica] >gi|1070193219|ref|XP_018352873.1| PREDICTED: protein transport protein Sec23A [Trachymyrmex septentrionalis]) HSP 1 Score: 117.472 bits (293), Expect = 4.679e-28 Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 0
Query: 4 CGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGG 105
C PP+FLLVVDTCLDD EL LKDSLQ L LLP AL+GLITFG V VHEL C++SYVFRG+K+ P++VQD+L I P+ GQ P QP RG G
Sbjct: 126 CLPPIFLLVVDTCLDDEELGALKDSLQMSLSLLPSNALIGLITFGKMVQVHELGCDGCSKSYVFRGTKDLQPKQVQDMLGIGRPIPGQNP--NQP---RGSG 222
BLAST of EWM26425.1 vs. NCBI_GenBank
Match: gi|1012984458|gb|KYQ58107.1| (Protein transport protein Sec23A [Trachymyrmex zeteki]) HSP 1 Score: 117.472 bits (293), Expect = 4.716e-28 Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 0
Query: 4 CGPPVFLLVVDTCLDDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSTDCARSYVFRGSKEYTPQRVQDLLNIAPPMRGQAPGMGQPGKGRGGG 105
C PP+FLLVVDTCLDD EL LKDSLQ L LLP AL+GLITFG V VHEL C++SYVFRG+K+ P++VQD+L I P+ GQ P QP RG G
Sbjct: 126 CLPPIFLLVVDTCLDDEELGALKDSLQMSLSLLPSNALIGLITFGKMVQVHELGCDGCSKSYVFRGTKDLQPKQVQDMLGIGRPIPGQNP--NQP---RGSG 222 The following BLAST results are available for this feature:
BLAST of EWM26425.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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