EWM26427.1, cds4246 (CDS) Nannochloropsis gaditana

Overview
NameEWM26427.1
Unique Namecds4246
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:102224..102332 +
Alignment locationCM002463.1:103459..103646 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26427.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100241g2.3011.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:102224..102332 +
CM002463.1supercontigCM002463.1:103459..103646 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26427.1 vs. NCBI_GenBank
Match: gi|585108467|gb|EWM26427.1| (hypothetical protein Naga_100241g2 [Nannochloropsis gaditana])

HSP 1 Score: 208.379 bits (529), Expect = 2.493e-68
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 
Query:    1 MEPASNKQLLMHITPDEEDGVPLIRGAIFLKPLFQWPPSTLNTRRNRISKRRPGNQSHHMDATEDRFHVICGEHGVFQIGSKVVGSFSVPDSYNARCT 98
            MEPASNKQLLMHITPDEEDGVPLIRGAIFLKPLFQWPPSTLNTRRNRISKRRPGNQSHHMDATEDRFHVICGEHGVFQIGSKVVGSFSVPDSYNARCT
Sbjct:    1 MEPASNKQLLMHITPDEEDGVPLIRGAIFLKPLFQWPPSTLNTRRNRISKRRPGNQSHHMDATEDRFHVICGEHGVFQIGSKVVGSFSVPDSYNARCT 98
The following BLAST results are available for this feature:
BLAST of EWM26427.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108467|gb|EWM26427.1|2.493e-68100.00hypothetical protein Naga_100241g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4256rna4256Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications