EWM26430.1, cds4245 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|585108470|gb|EWM26430.1| (thioredoxin-1 [Nannochloropsis gaditana]) HSP 1 Score: 508.449 bits (1308), Expect = 0.000e+0 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0 Query: 1 MNPIHFLLFLIVIASTTAFHTAPWASPSSTASLLPLHRQYKQNEQRPQSALTRLATIRGGVSGKVRTHMIEEGEKGKKDNFSHFLVILPVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQKFGSERPTGRCQSRQASRGRLPPSVGKRRVRKRHVAFLLTKWRRKIGQGGLGLHFSSLSEAKVCTKVKPFRPTRLI 248 MNPIHFLLFLIVIASTTAFHTAPWASPSSTASLLPLHRQYKQNEQRPQSALTRLATIRGGVSGKVRTHMIEEGEKGKKDNFSHFLVILPVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQKFGSERPTGRCQSRQASRGRLPPSVGKRRVRKRHVAFLLTKWRRKIGQGGLGLHFSSLSEAKVCTKVKPFRPTRLI Sbjct: 1 MNPIHFLLFLIVIASTTAFHTAPWASPSSTASLLPLHRQYKQNEQRPQSALTRLATIRGGVSGKVRTHMIEEGEKGKKDNFSHFLVILPVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQKFGSERPTGRCQSRQASRGRLPPSVGKRRVRKRHVAFLLTKWRRKIGQGGLGLHFSSLSEAKVCTKVKPFRPTRLI 248
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|553187771|ref|XP_005854675.1| (thioredoxin-1 [Nannochloropsis gaditana CCMP526] >gi|422294382|gb|EKU21682.1| thioredoxin-1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 277.715 bits (709), Expect = 2.983e-92 Identity = 141/172 (81.98%), Postives = 144/172 (83.72%), Query Frame = 0 Query: 1 MNPIHFLLFLIVIASTTAFHTAPWASPSSTASLLPLHRQYKQNEQRPQSALTRLATIRGGVSGKVRTHMIEEGEKGKKDNFSHFLVILPVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQ 172 MNPIHFLLFLIVIASTTAFHTAPWASPSSTASLLPLHRQYKQNEQRPQSALTRLATIRGGVSGKV SEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMP +I ++ Sbjct: 1 MNPIHFLLFLIVIASTTAFHTAPWASPSSTASLLPLHRQYKQNEQRPQSALTRLATIRGGVSGKV-------------------------SEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPTFIFVKN 147
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|298710531|emb|CBJ25595.1| (similar to thioredoxin-like protein [Ectocarpus siliculosus]) HSP 1 Score: 102.064 bits (253), Expect = 4.252e-23 Identity = 47/83 (56.63%), Postives = 65/83 (78.31%), Query Frame = 0 Query: 90 VSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQ 172 V +V T EE E+ ++ + LVV+DFTATWCGPC+ ISPVFE LS+E++ + VFLKVDVD NEETA+K++V QMP ++ +R+ Sbjct: 67 VQQVATQEELEQVISNSNGALVVIDFTATWCGPCQKISPVFELLSQELT--DVVFLKVDVDENEETAQKYDVVQMPTFLFMRK 147
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|1061097368|ref|XP_017875381.1| (PREDICTED: thioredoxin-2 [Ceratina calcarata]) HSP 1 Score: 98.5969 bits (244), Expect = 9.355e-23 Identity = 42/83 (50.60%), Postives = 64/83 (77.11%), Query Frame = 0 Query: 90 VSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQ 172 V E+++ ++ + L+GAG KLVV+DF ATWCGPCK+I+P EGLS+EI+ + +FLKVDVDV E+ A ++E++ MP +I ++ Sbjct: 2 VVEIKSADDLKVQLDGAGDKLVVIDFFATWCGPCKMIAPKMEGLSKEIT--DVIFLKVDVDVCEDLAGEYEITSMPTFIFIKN 82
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|1210521626|dbj|GAX19616.1| (thioredoxin 1 [Fistulifera solaris]) HSP 1 Score: 97.0561 bits (240), Expect = 1.057e-21 Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 0 Query: 90 VSEVRTLEETEEAL--NGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLR 171 V E TLE+ E+ L GA SKLVV+DFTATWCGPCK+ISPVF LS+ S ++ VFLKVDVD N +TA K+ VS MP ++ ++ Sbjct: 45 VVEPDTLEDVEDILLKAGAESKLVVIDFTATWCGPCKMISPVFHELSD--SFDDVVFLKVDVDENPDTAAKYNVSAMPTFLFIK 126
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|1210531759|dbj|GAX09726.1| (thioredoxin 1 [Fistulifera solaris]) HSP 1 Score: 95.9005 bits (237), Expect = 2.067e-21 Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 0 Query: 90 VSEVRTLEETEEAL--NGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQKFGSERPTGRCQSR 186 V E +LE+ E L GA SKLVV+DFTATWCGPCK+ISPVF LSE S ++ VFLKVDVD N +TA K+ VS MP ++ ++ +R G S+ Sbjct: 32 VVEPDSLEDVEAILLKAGAESKLVVIDFTATWCGPCKMISPVFHELSE--SFDDVVFLKVDVDENPDTAAKYNVSAMPTFLFIKGGEIVDRMMGANPSK 128
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|675381351|gb|KFM74253.1| (Thioredoxin, partial [Stegodyphus mimosarum]) HSP 1 Score: 92.8189 bits (229), Expect = 1.261e-20 Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 0 Query: 90 VSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQKFGSERPTGRCQSR 186 V V E+ E L+ AG KLVV+DF ATWCGPCKLI+P F+ LSEE + VFLKVDVD E+ A K+ VS +P ++ L+ K + G Q + Sbjct: 2 VHSVSDTEDFEAQLDAAGEKLVVVDFYATWCGPCKLIAPFFQELSEEF--QDVVFLKVDVDEVEDIASKYNVSSIPKFVFLKNKTEIDDLCGANQEK 96
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|1072255288|ref|XP_018412723.1| (PREDICTED: thioredoxin-like [Nanorana parkeri]) HSP 1 Score: 92.4337 bits (228), Expect = 2.079e-20 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 90 VSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVY 167 V + +LEE +EAL GAG KLV++DFTATWCGPCK+I P+FE LS+ S + VFLKVDVD ++ A+ ++ MP + Sbjct: 2 VRHIESLEEFKEALAGAGPKLVIVDFTATWCGPCKMIGPIFEALSQ--SHPDVVFLKVDVDDAQDVAQHCDIKCMPTF 77
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|51869053|emb|CAE54136.1| (thioredoxin-1, partial [Mesobuthus gibbosus]) HSP 1 Score: 92.0485 bits (227), Expect = 4.211e-20 Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 85 LVILPVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQKFGSERPTGRCQSR 186 ++++ V V E+ + + AG KLVV+DF ATWCGPCK I+P E L +E S N VFLKVDVD NEE A+ F VS MP +I L+ + + +G Q + Sbjct: 14 IIVIMVHLVVDKEDYDSQMEAAGEKLVVIDFFATWCGPCKXIAPFIEKLEQENSGN-VVFLKVDVDENEELAQTFNVSCMPTFILLKNRNKVDEFSGANQEK 114
BLAST of EWM26430.1 vs. NCBI_GenBank
Match: gi|51869021|emb|CAE54120.1| (thioredoxin-1, partial [Mesobuthus cyprius] >gi|51869025|emb|CAE54122.1| thioredoxin-1, partial [Mesobuthus cyprius] >gi|51869027|emb|CAE54123.1| thioredoxin-1, partial [Mesobuthus cyprius] >gi|51869029|emb|CAE54124.1| thioredoxin-1, partial [Mesobuthus cyprius] >gi|51869031|emb|CAE54125.1| thioredoxin-1, partial [Mesobuthus cyprius] >gi|51869033|emb|CAE54126.1| thioredoxin-1, partial [Mesobuthus cyprius]) HSP 1 Score: 91.6633 bits (226), Expect = 5.913e-20 Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 85 LVILPVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLRQKFGSERPTGRCQSRQASRGRLPPSVGKRR 201 ++++ V V E+ + + AG KLVV+DF ATWCGPCK I+P E L +E S N VFLKVDVD NEE A+ F VS MP +I L+ + + +G A++ +L V K + Sbjct: 14 IIVIMVHLVVDKEDYDSQMEAAGEKLVVIDFFATWCGPCKQIAPFIEKLEQENSGN-VVFLKVDVDENEELAQTFNVSCMPTFILLKNRNKVDEFSG------ANQEKLKEMVDKHK 123 The following BLAST results are available for this feature:
BLAST of EWM26430.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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