EWM26426.1, cds4242 (CDS) Nannochloropsis gaditana

Overview
NameEWM26426.1
Unique Namecds4242
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:86759..87346 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26426.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100241g6.3010.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:86759..87346 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26426.1 vs. NCBI_GenBank
Match: gi|585108466|gb|EWM26426.1| (hypothetical protein Naga_100241g6 [Nannochloropsis gaditana])

HSP 1 Score: 387.882 bits (995), Expect = 2.426e-136
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 
Query:    1 MRPLSPSSHRALDALLLVATDKEVILHNSNGNVVAETTEIKEREIGTDDEVSNLERADKKSRGRKEKETEGEQEKAGAEQVEREEDYPYGIREGEAQHGILEEGEDGDGPAGLLSDLANEGKTEGKAQAFTSPEVWEKACGMFKGILPLQALYRVYGEAEGLEGAVQVRGGRRAGRRRKGERVSDVKEEVCAEKK 195
            MRPLSPSSHRALDALLLVATDKEVILHNSNGNVVAETTEIKEREIGTDDEVSNLERADKKSRGRKEKETEGEQEKAGAEQVEREEDYPYGIREGEAQHGILEEGEDGDGPAGLLSDLANEGKTEGKAQAFTSPEVWEKACGMFKGILPLQALYRVYGEAEGLEGAVQVRGGRRAGRRRKGERVSDVKEEVCAEKK
Sbjct:    1 MRPLSPSSHRALDALLLVATDKEVILHNSNGNVVAETTEIKEREIGTDDEVSNLERADKKSRGRKEKETEGEQEKAGAEQVEREEDYPYGIREGEAQHGILEEGEDGDGPAGLLSDLANEGKTEGKAQAFTSPEVWEKACGMFKGILPLQALYRVYGEAEGLEGAVQVRGGRRAGRRRKGERVSDVKEEVCAEKK 195
The following BLAST results are available for this feature:
BLAST of EWM26426.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108466|gb|EWM26426.1|2.426e-136100.00hypothetical protein Naga_100241g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4252rna4252Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications