EWM26432.1, cds4240 (CDS) Nannochloropsis gaditana

Overview
NameEWM26432.1
Unique Namecds4240
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:77589..78074 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26432.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100395g4.5033.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:77589..78074 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26432.1 vs. NCBI_GenBank
Match: gi|585108473|gb|EWM26432.1| (hypothetical protein Naga_100395g4 [Nannochloropsis gaditana])

HSP 1 Score: 327.791 bits (839), Expect = 1.161e-113
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 
Query:    1 MQPYPKQSSPDQGASFMSFCFYSTISERISELDHFQGGKRCFLRANPMRSRVLSGRLGRKQRNHYQVPGNSCRRRSSLSLKYHKYCLVVTKTPTKNLHLSATRFEGITVFCRLCRKCMARRSVFLSRCRSIESRRRRLRTPAFLKLSASLQSIIWCLKKGY 161
            MQPYPKQSSPDQGASFMSFCFYSTISERISELDHFQGGKRCFLRANPMRSRVLSGRLGRKQRNHYQVPGNSCRRRSSLSLKYHKYCLVVTKTPTKNLHLSATRFEGITVFCRLCRKCMARRSVFLSRCRSIESRRRRLRTPAFLKLSASLQSIIWCLKKGY
Sbjct:    1 MQPYPKQSSPDQGASFMSFCFYSTISERISELDHFQGGKRCFLRANPMRSRVLSGRLGRKQRNHYQVPGNSCRRRSSLSLKYHKYCLVVTKTPTKNLHLSATRFEGITVFCRLCRKCMARRSVFLSRCRSIESRRRRLRTPAFLKLSASLQSIIWCLKKGY 161
The following BLAST results are available for this feature:
BLAST of EWM26432.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108473|gb|EWM26432.1|1.161e-113100.00hypothetical protein Naga_100395g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4250rna4250Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications