EWM26434.1, cds4239 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|585108475|gb|EWM26434.1| (transmembrane protein 97 [Nannochloropsis gaditana]) HSP 1 Score: 419.468 bits (1077), Expect = 1.764e-148 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 Query: 1 MADNYGGMPAFIRWLFFWYFVTHIPITLFIDAQSIFSMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPHLSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPFGMGLPRGHPKGGDVSKCPFASMMGLTAAEGLEGPAQDDAVRKKER 202 MADNYGGMPAFIRWLFFWYFVTHIPITLFIDAQSIFSMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPHLSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPFGMGLPRGHPKGGDVSKCPFASMMGLTAAEGLEGPAQDDAVRKKER Sbjct: 1 MADNYGGMPAFIRWLFFWYFVTHIPITLFIDAQSIFSMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPHLSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPFGMGLPRGHPKGGDVSKCPFASMMGLTAAEGLEGPAQDDAVRKKER 202
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|159464018|ref|XP_001690239.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158284227|gb|EDP09977.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 139.428 bits (350), Expect = 1.586e-38 Identity = 70/156 (44.87%), Postives = 98/156 (62.82%), Query Frame = 0 Query: 15 LFFWYFVTHIPITLFIDAQSIF-SMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPHLSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPFGMGLPRGHPKGG 169 +F YF+ HIP TL +D+QS+F + Y P L+W+ +T GD L++ P WF ++V CE +QLPFFFVAAY F + NW+R+PCI+YG+HVATT+VPIL +P L IY+PYL +P+ LV+ M + +PFG + K G Sbjct: 10 IFLAYFIIHIPTTLLVDSQSVFPAEYFPSWAKEALQWHIKTNGDHLVSTNPLWFVSLVWCETALQLPFFFVAAYAFIKRANWIRVPCIIYGAHVATTMVPILTDILFSPAAG-SHSPALAAIYAPYLALPLALVIRMAVSAQPFGSKRSQKRAKSG 164
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|1004147035|gb|KXZ55009.1| (hypothetical protein GPECTOR_3g172 [Gonium pectorale]) HSP 1 Score: 137.887 bits (346), Expect = 7.520e-38 Identity = 69/154 (44.81%), Postives = 103/154 (66.88%), Query Frame = 0 Query: 6 GGMPAFIRWLFFWYFVTHIPITLFIDAQSIF-SMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPHLSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPFG 158 G + + + +F +F+ HIP TL +D+QS+F + Y+PP L+W+ E GD L++ P WF ++V E++ QLPFFFVA+Y F ++NW+R+P I+YG+HV TT++PIL P S K+ TL IY PYL+VP++L+V M E+PFG Sbjct: 2 GALTSVLDVIFLAFFIIHIPTTLLVDSQSVFPAEYYPPWAKEALKWHIEMNGDHLVSKNPTWFVSLVWGEVLYQLPFFFVASYAFIKRRNWIRVPSIIYGAHVVTTMIPILTDILFGPD-SGPKRHTLAAIYVPYLIVPLLLLVRMAVVEQPFG 154
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|302853276|ref|XP_002958154.1| (hypothetical protein VOLCADRAFT_108000 [Volvox carteri f. nagariensis] >gi|300256515|gb|EFJ40779.1| hypothetical protein VOLCADRAFT_108000 [Volvox carteri f. nagariensis]) HSP 1 Score: 137.502 bits (345), Expect = 1.064e-37 Identity = 78/154 (50.65%), Postives = 111/154 (72.08%), Query Frame = 0 Query: 6 GGMPAFIRWLFFWYFVTHIPITLFIDAQSIF-SMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPHLSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPFG 158 G + + + +F YF+ HIP T+ +D+QS+ + Y P LL+W+ +T GD L+++ P WF ++VACE+++QLPFFFVA+Y F ++NW+R+PCIVYGSHVATT+VPIL F +P K++TL+ IY PYL+VPV+LVV M ERPFG Sbjct: 2 GLLTSVLDRIFLAYFILHIPTTVIVDSQSVVPAQYFPSWAKELLQWHIKTNGDHLVSSNPLWFVSLVACEILLQLPFFFVASYAFLKRRNWIRIPCIVYGSHVATTMVPILSEFLFSPEAG-PKRLTLVSIYLPYLVVPVLLVVRMAVVERPFG 154
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|923125288|ref|XP_013756112.1| (transmembrane protein 97 [Thecamonas trahens ATCC 50062] >gi|906558207|gb|KNC51450.1| transmembrane protein 97 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 135.961 bits (341), Expect = 3.827e-37 Identity = 75/154 (48.70%), Postives = 97/154 (62.99%), Query Frame = 0 Query: 15 LFFWYFVTHIPITLFIDAQS--IFSMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPH--------LSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPFG 158 +F YF HIP T IDAQ + + P LL ++ ET+ D L+A+PP WF ++V CE ++QLPFFFVA Y F ++NW+R+P I+YG+HVATTLVPIL A A L+ + + TLI IY PYLLVP+ LVV M E PFG Sbjct: 7 VFLVYFAVHIPTTALIDAQCLPVVAELVPGFAKELLAYHVETFHDPLVADPPRWFVSLVVCEALLQLPFFFVAVYAFVAKRNWIRIPAIIYGAHVATTLVPILAEIAYAEPKADSPGGVLTPELRATLIAIYIPYLLVPITLVVRMACAEHPFG 160
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|831295577|ref|XP_012679539.1| (PREDICTED: transmembrane protein 97 [Clupea harengus]) HSP 1 Score: 135.191 bits (339), Expect = 1.075e-36 Identity = 70/146 (47.95%), Postives = 99/146 (67.81%), Query Frame = 0 Query: 15 LFFWYFVTHIPITLFIDAQSIFSMY-HPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQ-NWLRLPCIVYGSHVATTLVPILD-----AFARAPH---LSLDKKITLIGIYSPYLLVPVMLVVIM 150 ++F YF +HIPITLFID Q++ + +P A L+RWY + D +M +PP WF++ + CE ++QLPFF VAAY FW W+R P IVY +HVATTLVPIL F +APH ++ +++TL+ IY+PYL+VP+ML+ M Sbjct: 9 IYFLYFASHIPITLFIDFQALLPEHVYPQALKQLMRWYAAEFKDPMMLDPPVWFKSFILCEALVQLPFFPVAAYAFWKGGCKWIRTPAIVYSTHVATTLVPILSYVLLHQFPQAPHPGPQTMRERLTLVSIYAPYLIVPIMLLFTM 154
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|524914096|ref|XP_005111867.1| (PREDICTED: transmembrane protein 97-like [Aplysia californica]) HSP 1 Score: 134.806 bits (338), Expect = 1.353e-36 Identity = 73/153 (47.71%), Postives = 96/153 (62.75%), Query Frame = 0 Query: 8 MPAFIRWLFFWYFVTHIPITLFIDAQSIF-SMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQN---WLRLPCIVYGSHVATTLVPI-----LDAFARAPH---LSLDKKITLIGIYSPYLLVPVMLVV 148 MP + LFF+YF THIPIT+FID Q++ Y P L WY + D +M +PP WFQA V CE ++QLPFFFVAAYGF+ WLR PC+VYGSHVATTL+PI L F+ H +++++ TLI IY PY P+ +++ Sbjct: 1 MPRLLDILFFFYFFTHIPITIFIDLQALLPQKYFPQKTVELKDWYCLHFRDPMMVDPPTWFQAFVGCEFLVQLPFFFVAAYGFFKGAEKCPWLRWPCVVYGSHVATTLIPIISHILLHDFSTGKHPGPRNMEERFTLISIYCPYFFFPLFIML 153
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|929752243|ref|XP_014151104.1| (hypothetical protein SARC_10331 [Sphaeroforma arctica JP610] >gi|906944714|gb|KNC77202.1| hypothetical protein SARC_10331 [Sphaeroforma arctica JP610]) HSP 1 Score: 130.954 bits (328), Expect = 2.918e-35 Identity = 63/140 (45.00%), Postives = 91/140 (65.00%), Query Frame = 0 Query: 19 YFVTHIPITLFIDAQSIFSMYHPPAF-TNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPHLSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPF 157 YF +HIPITL +D+Q+I P F + WY +T+ D LMA+PP WFQ+ +ACEL+ Q+P FF+A YG+W + NW+R P +VYG+HV TTLVP+L R + +K+ L Y PYL++P ++ + M+ PF Sbjct: 14 YFASHIPITLLMDSQAIVPPVWIPDFAVEMNSWYIKTFNDPLMASPPIWFQSFIACELIFQIPIFFLAVYGYWNRCNWIRDPLMVYGAHVTTTLVPVLYELYRNDQVEDGQKLVLAAFYIPYLIIPFLITLRMFMCTVPF 153
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|1025120348|ref|XP_016412633.1| (PREDICTED: transmembrane protein 97-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 130.183 bits (326), Expect = 9.825e-35 Identity = 73/172 (42.44%), Postives = 102/172 (59.30%), Query Frame = 0 Query: 12 IRWLFFWYFVTHIPITLFIDAQSIFSMY-HPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQ-NWLRLPCIVYGSHVATTLVPIL-----DAFARAPH---LSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPFGMGLPRGHPKGGDVSK 173 + +FF+YF++HIPITL ID Q + + +P NLL WY + D +M +PP WF++ V CE + QLPFF +AAY F T W+R P I+Y HVATTL+PIL + F APH +L +++TL+ IY+PYL++PVM++ M F KG SK Sbjct: 6 LEIIFFFYFLSHIPITLMIDLQPLLPEHLYPSKLKNLLHWYAAEFKDPMMMDPPVWFKSFVFCEALFQLPFFPIAAYAFMTGGCKWIRTPAIIYSVHVATTLIPILSHVLFNNFPLAPHPGPQTLQERLTLVSIYAPYLIIPVMILFTML-----FSSTYNSTSSKGNASSK 172
BLAST of EWM26434.1 vs. NCBI_GenBank
Match: gi|355753848|gb|EHH57813.1| (Protein MAC30 [Macaca fascicularis]) HSP 1 Score: 129.413 bits (324), Expect = 1.594e-34 Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = 0 Query: 7 GMPA---FIRWLFFWYFVTHIPITLFIDAQSIFSMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQ-NWLRLPCIVYGSHVATTLVPILDAF------------ARAPHLSLDKKITLIGIYSPYLLVPVMLVVIMWRN 153 G+PA + WL YF++HIPITLF+D Q++ +P F NLL+WY + + D L+ PP WF++ + CELV QLPFF +A Y F W+R P I+Y H TTL+PIL F + P +L +++TLI +Y+PYLL+P +L++ M R+ Sbjct: 2 GVPATRRCVEWLLGIYFLSHIPITLFMDLQAVPRELYPVEFRNLLKWYAKEFKDPLLQEPPAWFKSFLFCELVFQLPFFPIATYAFLKGSCKWIRTPAIIYSVHTMTTLIPILSTFLFEDFSKASGFKGQRPE-TLHERLTLISVYAPYLLIPFILLIFMLRS 163 The following BLAST results are available for this feature:
BLAST of EWM26434.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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