EWM26433.1, cds4238 (CDS) Nannochloropsis gaditana

Overview
NameEWM26433.1
Unique Namecds4238
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:72787..72844 +
Alignment locationCM002463.1:73096..73208 +
Alignment locationCM002463.1:73365..73421 +
Alignment locationCM002463.1:73596..74126 +
Alignment locationCM002463.1:74376..74456 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26433.1
Productn-acetylglucosamine-1-phosphotransferase subunits alpha beta
Orig transcript idgnl|cribi|Naga_100395g1.5034.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:72787..72844 +
CM002463.1supercontigCM002463.1:73096..73208 +
CM002463.1supercontigCM002463.1:73365..73421 +
CM002463.1supercontigCM002463.1:73596..74126 +
CM002463.1supercontigCM002463.1:74376..74456 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
Homology
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|585108474|gb|EWM26433.1| (n-acetylglucosamine-1-phosphotransferase subunits alpha beta [Nannochloropsis gaditana])

HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDCMLGGGRREGLRGGGDGREGRRRLQRSAAGEEERREGEREAKLEVAGWGSAQLEERDALGSRGKDEIRGGRGGGGGAEGGGGKEAEEEEGEGIGAPGSGPLEEEEGGEGDKEGRKEREGTAESGDDGGDRPAEEQALPSEETKISLEHFLGCQQILTDLEKNVRRKGPWTPGPIEDVRQD 279
            MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDCMLGGGRREGLRGGGDGREGRRRLQRSAAGEEERREGEREAKLEVAGWGSAQLEERDALGSRGKDEIRGGRGGGGGAEGGGGKEAEEEEGEGIGAPGSGPLEEEEGGEGDKEGRKEREGTAESGDDGGDRPAEEQALPSEETKISLEHFLGCQQILTDLEKNVRRKGPWTPGPIEDVRQD
Sbjct:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDCMLGGGRREGLRGGGDGREGRRRLQRSAAGEEERREGEREAKLEVAGWGSAQLEERDALGSRGKDEIRGGRGGGGGAEGGGGKEAEEEEGEGIGAPGSGPLEEEEGGEGDKEGRKEREGTAESGDDGGDRPAEEQALPSEETKISLEHFLGCQQILTDLEKNVRRKGPWTPGPIEDVRQD 279          
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|676382083|ref|XP_009034320.1| (hypothetical protein AURANDRAFT_71036 [Aureococcus anophagefferens] >gi|323454862|gb|EGB10731.1| hypothetical protein AURANDRAFT_71036 [Aureococcus anophagefferens])

HSP 1 Score: 104.76 bits (260), Expect = 1.529e-21
Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDC 100
            MPH+ID+++V  +Q ++ E W  T+ HRFR+  D+QY+F+YF+Y+M    A   DL  LW  +ID DG G LD NE++TLAA+ +G++P   Y+ +I  C
Sbjct: 1576 MPHMIDRDVVGAIQKKYAEPWRETASHRFRSGRDVQYAFAYFHYVMGTFDAAAPDLDELWRVEIDADGSGALDGNEVLTLAAMALGKEPDDAYVDEIYAC 1675          
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|301123175|ref|XP_002909314.1| (N-acetylglucosamine-1-phosphotransferase subunits alpha/beta, putative [Phytophthora infestans T30-4] >gi|262100076|gb|EEY58128.1| N-acetylglucosamine-1-phosphotransferase subunits alpha/beta, putative [Phytophthora infestans T30-4])

HSP 1 Score: 100.908 bits (250), Expect = 1.304e-20
Identity = 43/111 (38.74%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDCMLGGGRREGLR 111
            MP L+ K ++ E++  W +E   TS HRFR   DMQ+SFSYF+YL+N  K HP  L+ +W   +D + +G LD++E++T A+L  G  P   ++ ++++C +   +RE +R
Sbjct:  199 MPFLVQKSIIREIKDHWTQEIQDTSAHRFRHPQDMQFSFSYFHYLINRAKIHPHTLEEIWSEYLDANRNGILDESEVLTAASLAHGDAPPEIFVSEVREC-VQPNKREKVR 308          
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|1160553707|ref|XP_020436795.1| (putative glycophosphotransferase [Polysphondylium pallidum PN500] >gi|281210516|gb|EFA84682.1| putative glycophosphotransferase [Polysphondylium pallidum PN500])

HSP 1 Score: 100.908 bits (250), Expect = 2.508e-20
Identity = 41/81 (50.62%), Postives = 59/81 (72.84%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLA 81
            MPH+IDK+L+ E+Q +W  +W+ TS H  R   DMQY+FSYFYY+  + K  P D   LW+S+ID++GDG+L++NEL + A
Sbjct:  667 MPHMIDKDLMEEIQTKWPVQWESTSSHSLRNPRDMQYAFSYFYYM--IHKKVPFDFDKLWHSEIDINGDGWLNENELRSFA 745          
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|1173942749|gb|OQR91699.1| (N-acetylglucosamine-1-phosphotransferase subunits alpha/beta, partial [Thraustotheca clavata])

HSP 1 Score: 100.138 bits (248), Expect = 5.811e-20
Identity = 44/102 (43.14%), Postives = 70/102 (68.63%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRD-PTYGYLMKIKDCM 101
            MPH I K+L++EM+A+W  E++ TS HRFR   DMQ+SFSY YY+ N  K HP  L+ ++   ID++ DG +DDNE++++A+L    + P+   + ++K C+
Sbjct:   49 MPHFIQKKLLSEMKAQWPVEFNATSSHRFRHPKDMQFSFSYMYYVANRHKLHPPTLEEIFTKYIDLNLDGVIDDNEVLSVASLLTTEEHPSESDMEEVKKCL 150          
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|953486497|emb|CEG49400.1| (n-acetylglucosamine-1-phosphotransferase subunits alpha [Plasmopara halstedii])

HSP 1 Score: 99.7525 bits (247), Expect = 6.736e-20
Identity = 49/126 (38.89%), Postives = 78/126 (61.90%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDCMLGGGRREGLRGGGDGREGRRRLQRS 126
            MP L+ K ++ E++  W +E + TS HRFR   DMQ+SFSYF+YL+N  K HP  L+ +W   +D + +G LD++E++T A+L  G  P   ++  +++C +   +RE +R    G EG  RLQ +
Sbjct:  947 MPFLLQKSIIREIKDFWTKEIENTSTHRFRHPQDMQFSFSYFHYLINRAKIHPHTLQDIWREYLDANRNGVLDEDEVLTAASLAHGDAPPEDFVTTVRNC-IQPAKREKVREFPTG-EGTIRLQET 1070          
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|970654173|gb|KUF92521.1| (NIPA protein 2 [Phytophthora nicotianae])

HSP 1 Score: 98.9821 bits (245), Expect = 1.184e-19
Identity = 48/126 (38.10%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDCMLGGGRREGLRGGGDGREGRRRLQRS 126
            MP L+ K ++ E++  W +E   TS HRFR   DMQ+SFSYF+YL+N  K HP  L+ +W   +D + +G LD+NE++T A+L  G  P   ++ ++++C+    +RE +R      EG  RL  +
Sbjct:  997 MPFLLQKSIIREIKDHWTKEIQDTSAHRFRHPQDMQFSFSYFHYLINRAKIHPHTLEEIWREYLDANRNGILDENEVLTAASLAHGDAPPEDFVNEVRECV-QPEKREKVREIPTA-EGTLRLSET 1120          
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|567996163|gb|ETL46285.1| (hypothetical protein L916_03814 [Phytophthora parasitica])

HSP 1 Score: 98.9821 bits (245), Expect = 1.184e-19
Identity = 48/126 (38.10%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDCMLGGGRREGLRGGGDGREGRRRLQRS 126
            MP L+ K ++ E++  W +E   TS HRFR   DMQ+SFSYF+YL+N  K HP  L+ +W   +D + +G LD+NE++T A+L  G  P   ++ ++++C +   +RE +R      EG  RL  +
Sbjct:  997 MPFLLQKSIIREIKDHWTKEIQDTSAHRFRHPQDMQFSFSYFHYLINRAKIHPHTLEEIWREYLDANRNGILDENEVLTAASLAHGDAPPEDFVNEVREC-VQPEKREKVREIPTA-EGTLRLSET 1120          
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|570957833|gb|ETP22812.1| (hypothetical protein F441_03970 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 98.9821 bits (245), Expect = 1.195e-19
Identity = 48/126 (38.10%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDCMLGGGRREGLRGGGDGREGRRRLQRS 126
            MP L+ K ++ E++  W +E   TS HRFR   DMQ+SFSYF+YL+N  K HP  L+ +W   +D + +G LD+NE++T A+L  G  P   ++ ++++C +   +RE +R      EG  RL  +
Sbjct:  997 MPFLLQKSIIREIKDHWTKEIQDTSAHRFRHPQDMQFSFSYFHYLINRAKIHPHTLEEIWREYLDANRNGILDENEVLTAASLAHGDAPPEDFVNEVREC-VQPEKREKVREIPTA-EGTLRLSET 1120          
BLAST of EWM26433.1 vs. NCBI_GenBank
Match: gi|970663442|gb|KUG00615.1| (N-acetylglucosamine-1-phosphotransferase subunits alpha/beta [Phytophthora nicotianae])

HSP 1 Score: 98.9821 bits (245), Expect = 1.230e-19
Identity = 48/126 (38.10%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MPHLIDKELVTEMQARWKEEWDRTSQHRFRAADDMQYSFSYFYYLMNLQKAHPLDLKALWYSDIDVDGDGFLDDNELVTLAALGMGRDPTYGYLMKIKDCMLGGGRREGLRGGGDGREGRRRLQRS 126
            MP L+ K ++ E++  W +E   TS HRFR   DMQ+SFSYF+YL+N  K HP  L+ +W   +D + +G LD+NE++T A+L  G  P   ++ ++++C+    +RE +R      EG  RL  +
Sbjct:  997 MPFLLQKSIIREIKDHWTKEIQDTSAHRFRHPQDMQFSFSYFHYLINRAKIHPHTLEEIWREYLDANRNGILDENEVLTAASLAHGDAPPEDFVNEVRECV-QPEKREKVREIPTA-EGTLRLSET 1120          
The following BLAST results are available for this feature:
BLAST of EWM26433.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108474|gb|EWM26433.1|0.000e+0100.00n-acetylglucosamine-1-phosphotransferase subunits ... [more]
gi|676382083|ref|XP_009034320.1|1.529e-2145.00hypothetical protein AURANDRAFT_71036 [Aureococcus... [more]
gi|301123175|ref|XP_002909314.1|1.304e-2038.74N-acetylglucosamine-1-phosphotransferase subunits ... [more]
gi|1160553707|ref|XP_020436795.1|2.508e-2050.62putative glycophosphotransferase [Polysphondylium ... [more]
gi|1173942749|gb|OQR91699.1|5.811e-2043.14N-acetylglucosamine-1-phosphotransferase subunits ... [more]
gi|953486497|emb|CEG49400.1|6.736e-2038.89n-acetylglucosamine-1-phosphotransferase subunits ... [more]
gi|970654173|gb|KUF92521.1|1.184e-1938.10NIPA protein 2 [Phytophthora nicotianae][more]
gi|567996163|gb|ETL46285.1|1.184e-1938.10hypothetical protein L916_03814 [Phytophthora para... [more]
gi|570957833|gb|ETP22812.1|1.195e-1938.10hypothetical protein F441_03970 [Phytophthora para... [more]
gi|970663442|gb|KUG00615.1|1.230e-1938.10N-acetylglucosamine-1-phosphotransferase subunits ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4248rna4248Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications