EWM26439.1, cds4233 (CDS) Nannochloropsis gaditana

Overview
NameEWM26439.1
Unique Namecds4233
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:61409..61497 -
Alignment locationCM002463.1:61067..61213 -
Alignment locationCM002463.1:60727..60850 -
Alignment locationCM002463.1:60478..60573 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26439.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100344g3.10759.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:61409..61497 -
CM002463.1supercontigCM002463.1:61067..61213 -
CM002463.1supercontigCM002463.1:60727..60850 -
CM002463.1supercontigCM002463.1:60478..60573 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR013830SGNH_hydro
Homology
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|585108483|gb|EWM26439.1| (hypothetical protein Naga_100344g3 [Nannochloropsis gaditana])

HSP 1 Score: 311.227 bits (796), Expect = 1.885e-107
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query:    1 MPSQRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII 151
            MPSQRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII
Sbjct:    1 MPSQRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII 151          
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|553183672|ref|XP_005853939.1| (lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526] >gi|422295117|gb|EKU22416.1| lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 304.294 bits (778), Expect = 8.580e-104
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0
Query:    4 QRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII 151
            + WVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII
Sbjct:   59 EGWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII 206          
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|585104073|gb|EWM23185.1| (lipolytic protein g-d-s-l family [Nannochloropsis gaditana])

HSP 1 Score: 176.407 bits (446), Expect = 2.818e-52
Identity = 81/147 (55.10%), Postives = 103/147 (70.07%), Query Frame = 0
Query:    4 QRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPI 150
            + W  SIPAEY+ + K   P TI+MDGGGNDVIS + DC S +D C+ QI EA  I +DLLE+MHED V HV+ MG +Y+  L KA D G + ++  C  A IDCH+AD RDL  P G DG+HP  EGY++LA RIWE+KL+N +PI
Sbjct:  145 EGWTESIPAEYAELDKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI 291          
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|553182994|ref|XP_005853822.1| (hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >gi|422295241|gb|EKU22540.1| hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >gi|585112598|gb|EWM29990.1| hypothetical protein Naga_100276g6 [Nannochloropsis gaditana])

HSP 1 Score: 170.244 bits (430), Expect = 1.342e-50
Identity = 80/148 (54.05%), Postives = 105/148 (70.95%), Query Frame = 0
Query:    6 WVPSIPAEYSIMSKNPPP---ITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPI 150
            WV S+P  Y  M K   P    TIV++GGGNDVI+V+DDC +FND+C++QI EA DI   LL  MH+D V+HV+ +G YY  N+ +AVD G + +  VC+ A IDCH+AD R+L  P G DGIHP+ EGY+ L+TRIWE+K  N+IPI
Sbjct:   76 WVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIPI 223          
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|1182764890|emb|SMF04632.1| (Lysophospholipase L1 [Pseudobacteriovorax antillogorgiicola])

HSP 1 Score: 83.5741 bits (205), Expect = 5.380e-17
Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 0
Query:   10 IPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLE----NLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGD---DGIHPIQEGYELLATRIWEI 142
            +  +Y        P T++M+GGGNDV+     C   N RC   I+ A D   DL++ M +D V+ ++ +G YY +     L+ A+D     +  +C    + C + +TR L    G+   DGIHP   G   +A  IWE+
Sbjct:   82 VVQQYYRARARGIPQTVIMNGGGNDVLGNITSCRFLNSRCVNAIEGAIDQGVDLIQLMEDDGVERIVYLGYYYTKFIGGGLDNAIDYAMARIPQICGATNLPCDVVETRRLMNGFGNRIIDGIHPTFRGSRKMADAIWEV 221          
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|1097643629|emb|SFM36860.1| (GDSL-like Lipase/Acylhydrolase [Marinobacter zhejiangensis])

HSP 1 Score: 72.0182 bits (175), Expect = 2.350e-12
Identity = 51/154 (33.12%), Postives = 73/154 (47.40%), Query Frame = 0
Query:    9 SIPAEYSIMSKNPPPI-TIVMDGGGNDVI---------SVKDDCLSF---NDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYY-------LENLNKAVDEGFKLLSNVCKNATIDCHIADTRDL--DPPLGDDGIHPIQEGYELLATRIW 140
            SI  +Y I   + P I TIVMDGGGND++           K     F   +  C+  I +      +LL  MH D V +V+ +G YY       L+++ +AVD G   L+  C+ + ++C   D R    D  +  DGIHP   G   LA+ IW
Sbjct:  100 SIVDQYQIARSDNPAIDTIVMDGGGNDILIPAIMFDPYDCKTQWYEFGQLSSSCKNLINDIYVDGVNLLNDMHADGVDNVIYLGYYYTKNGLFLLDSMEEAVDYGDYRLAQACRYSAVNCQFVDPRSAINDSDIIADGIHPTTTGSRKLASLIW 253          
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|1088945591|emb|SDW35142.1| (GDSL-like Lipase/Acylhydrolase [Marinobacter mobilis])

HSP 1 Score: 70.8626 bits (172), Expect = 5.162e-12
Identity = 52/154 (33.77%), Postives = 70/154 (45.45%), Query Frame = 0
Query:    9 SIPAEYSIMSKNPPPI-TIVMDGGGNDVI---------SVKDDCLSFNDRCQQQIKEATDILAD---LLERMHEDKVQHVLLMGPYY-------LENLNKAVDEGFKLLSNVCKNATIDCHIADTRDL--DPPLGDDGIHPIQEGYELLATRIW 140
            SI  +Y I   + P I T+VMDGGGND++           K     F    +       DI  D   LL  MH D V HV+ +G YY       L+++ +AVD G   L+  C+ + ++C   D R    D  +  DGIHP   G   LA  IW
Sbjct:   87 SIVDQYQIARSDNPAIDTVVMDGGGNDILIPAIMFDPYDCKTQWYEFGQLSRSCKDLINDIYVDGVNLLNDMHADGVDHVIYLGYYYTKNGLFLLDSMEEAVDYGDTRLAQACQYSAVNCQFIDPRSAINDGDIIADGIHPNTTGSRKLANLIW 240          
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|930110743|gb|KPH26623.1| (hypothetical protein ADU60_08890 [Vibrio coralliilyticus])

HSP 1 Score: 70.4774 bits (171), Expect = 6.386e-12
Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = 0
Query:    8 PSIPAEYSIMSKNPPPITIVMDGGGNDVI---SVKD--DCLS------FNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYL----ENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPP--LGDDGIHPIQEGYELLATRIW 140
            P +       S +P    IVMDGGGND++   +V D   C +       + +C+  + +      +LL  M ++ VQ V+ +G YY     ENL++A+D G   L++ C N T+ C   D R    P  +  D IHP   G + LA  IW
Sbjct:   68 PVVEQYQDAQSDDPNINVIVMDGGGNDILLPAAVFDPHKCKTTWYRPELSSKCKSLVDDVYVETVNLLNEMDQNGVQQVIYLGYYYTTGDKENLHQAIDFGDNRLADACTNTTVSCQFVDPRPYIAPEDVLSDNIHPTTSGSQKLAQLIW 217          
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|740729500|ref|WP_038514786.1| (SGNH/GDSL hydrolase family protein [Vibrio coralliilyticus] >gi|700288572|gb|AIU68472.1| hypothetical protein JV59_33150 [Vibrio coralliilyticus])

HSP 1 Score: 70.4774 bits (171), Expect = 7.251e-12
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0
Query:   18 SKNPPPITIVMDGGGNDVI---SVKD--DCLS------FNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYL----ENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPP--LGDDGIHPIQEGYELLATRIW 140
            S +P    IVMDGGGND++   +V D   C +       + +C+  + +      +LL  M ++ VQ V+ +G YY     ENL++A+D G   L++ C N T+ C   D R    P  +  D IHP   G + LA  IW
Sbjct:  101 SDDPNINVIVMDGGGNDILLPAAVFDPHKCKTTWYRPELSSKCKSLVDDVYVETVNLLNEMDQNGVQQVIYLGYYYTTGDKENLHQAIDFGDNRLADACTNTTVSCQFVDPRPYIAPEDVLSDNIHPTTSGSQKLAQLIW 240          
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|740325427|ref|WP_038162496.1| (SGNH/GDSL hydrolase family protein [Vibrio sp. B183] >gi|672867969|gb|KFI10766.1| hypothetical protein IX95_18150 [Vibrio sp. B183])

HSP 1 Score: 70.4774 bits (171), Expect = 8.038e-12
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0
Query:   18 SKNPPPITIVMDGGGNDVI---SVKD--DCLS------FNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYL----ENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPP--LGDDGIHPIQEGYELLATRIW 140
            S +P    IVMDGGGND++   +V D   C +       + +C+  + +      +LL  M ++ VQ V+ +G YY     ENL++A+D G   L++ C N T+ C   D R    P  +  D IHP   G + LA  IW
Sbjct:  101 SDDPNINVIVMDGGGNDILLPAAVFDPHKCKTTWYRPELSSKCKSLVDDVYVETVNLLNEMDQNGVQQVIYLGYYYTTGDKENLHQAIDFGDNRLADACTNTTVSCQFVDPRPYIAPEDVLSDNIHPTTSGSQKLAQLIW 240          
The following BLAST results are available for this feature:
BLAST of EWM26439.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108483|gb|EWM26439.1|1.885e-107100.00hypothetical protein Naga_100344g3 [Nannochloropsi... [more]
gi|553183672|ref|XP_005853939.1|8.580e-10498.65lipolytic protein g-d-s-l family [Nannochloropsis ... [more]
gi|585104073|gb|EWM23185.1|2.818e-5255.10lipolytic protein g-d-s-l family [Nannochloropsis ... [more]
gi|553182994|ref|XP_005853822.1|1.342e-5054.05hypothetical protein NGA_0470400 [Nannochloropsis ... [more]
gi|1182764890|emb|SMF04632.1|5.380e-1731.43Lysophospholipase L1 [Pseudobacteriovorax antillog... [more]
gi|1097643629|emb|SFM36860.1|2.350e-1233.12GDSL-like Lipase/Acylhydrolase [Marinobacter zheji... [more]
gi|1088945591|emb|SDW35142.1|5.162e-1233.77GDSL-like Lipase/Acylhydrolase [Marinobacter mobil... [more]
gi|930110743|gb|KPH26623.1|6.386e-1232.00hypothetical protein ADU60_08890 [Vibrio coralliil... [more]
gi|740729500|ref|WP_038514786.1|7.251e-1233.57SGNH/GDSL hydrolase family protein [Vibrio coralli... [more]
gi|740325427|ref|WP_038162496.1|8.038e-1233.57SGNH/GDSL hydrolase family protein [Vibrio sp. B18... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4243rna4243Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications