EWM26439.1, cds4233 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|585108483|gb|EWM26439.1| (hypothetical protein Naga_100344g3 [Nannochloropsis gaditana]) HSP 1 Score: 311.227 bits (796), Expect = 1.885e-107 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 1 MPSQRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII 151
MPSQRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII
Sbjct: 1 MPSQRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII 151
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|553183672|ref|XP_005853939.1| (lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526] >gi|422295117|gb|EKU22416.1| lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 304.294 bits (778), Expect = 8.580e-104 Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0
Query: 4 QRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII 151
+ WVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII
Sbjct: 59 EGWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPII 206
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|585104073|gb|EWM23185.1| (lipolytic protein g-d-s-l family [Nannochloropsis gaditana]) HSP 1 Score: 176.407 bits (446), Expect = 2.818e-52 Identity = 81/147 (55.10%), Postives = 103/147 (70.07%), Query Frame = 0
Query: 4 QRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPI 150
+ W SIPAEY+ + K P TI+MDGGGNDVIS + DC S +D C+ QI EA I +DLLE+MHED V HV+ MG +Y+ L KA D G + ++ C A IDCH+AD RDL P G DG+HP EGY++LA RIWE+KL+N +PI
Sbjct: 145 EGWTESIPAEYAELDKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI 291
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|553182994|ref|XP_005853822.1| (hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >gi|422295241|gb|EKU22540.1| hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >gi|585112598|gb|EWM29990.1| hypothetical protein Naga_100276g6 [Nannochloropsis gaditana]) HSP 1 Score: 170.244 bits (430), Expect = 1.342e-50 Identity = 80/148 (54.05%), Postives = 105/148 (70.95%), Query Frame = 0
Query: 6 WVPSIPAEYSIMSKNPPP---ITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPI 150
WV S+P Y M K P TIV++GGGNDVI+V+DDC +FND+C++QI EA DI LL MH+D V+HV+ +G YY N+ +AVD G + + VC+ A IDCH+AD R+L P G DGIHP+ EGY+ L+TRIWE+K N+IPI
Sbjct: 76 WVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIPI 223
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|1182764890|emb|SMF04632.1| (Lysophospholipase L1 [Pseudobacteriovorax antillogorgiicola]) HSP 1 Score: 83.5741 bits (205), Expect = 5.380e-17 Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 0
Query: 10 IPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLE----NLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGD---DGIHPIQEGYELLATRIWEI 142
+ +Y P T++M+GGGNDV+ C N RC I+ A D DL++ M +D V+ ++ +G YY + L+ A+D + +C + C + +TR L G+ DGIHP G +A IWE+
Sbjct: 82 VVQQYYRARARGIPQTVIMNGGGNDVLGNITSCRFLNSRCVNAIEGAIDQGVDLIQLMEDDGVERIVYLGYYYTKFIGGGLDNAIDYAMARIPQICGATNLPCDVVETRRLMNGFGNRIIDGIHPTFRGSRKMADAIWEV 221
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|1097643629|emb|SFM36860.1| (GDSL-like Lipase/Acylhydrolase [Marinobacter zhejiangensis]) HSP 1 Score: 72.0182 bits (175), Expect = 2.350e-12 Identity = 51/154 (33.12%), Postives = 73/154 (47.40%), Query Frame = 0
Query: 9 SIPAEYSIMSKNPPPI-TIVMDGGGNDVI---------SVKDDCLSF---NDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYY-------LENLNKAVDEGFKLLSNVCKNATIDCHIADTRDL--DPPLGDDGIHPIQEGYELLATRIW 140
SI +Y I + P I TIVMDGGGND++ K F + C+ I + +LL MH D V +V+ +G YY L+++ +AVD G L+ C+ + ++C D R D + DGIHP G LA+ IW
Sbjct: 100 SIVDQYQIARSDNPAIDTIVMDGGGNDILIPAIMFDPYDCKTQWYEFGQLSSSCKNLINDIYVDGVNLLNDMHADGVDNVIYLGYYYTKNGLFLLDSMEEAVDYGDYRLAQACRYSAVNCQFVDPRSAINDSDIIADGIHPTTTGSRKLASLIW 253
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|1088945591|emb|SDW35142.1| (GDSL-like Lipase/Acylhydrolase [Marinobacter mobilis]) HSP 1 Score: 70.8626 bits (172), Expect = 5.162e-12 Identity = 52/154 (33.77%), Postives = 70/154 (45.45%), Query Frame = 0
Query: 9 SIPAEYSIMSKNPPPI-TIVMDGGGNDVI---------SVKDDCLSFNDRCQQQIKEATDILAD---LLERMHEDKVQHVLLMGPYY-------LENLNKAVDEGFKLLSNVCKNATIDCHIADTRDL--DPPLGDDGIHPIQEGYELLATRIW 140
SI +Y I + P I T+VMDGGGND++ K F + DI D LL MH D V HV+ +G YY L+++ +AVD G L+ C+ + ++C D R D + DGIHP G LA IW
Sbjct: 87 SIVDQYQIARSDNPAIDTVVMDGGGNDILIPAIMFDPYDCKTQWYEFGQLSRSCKDLINDIYVDGVNLLNDMHADGVDHVIYLGYYYTKNGLFLLDSMEEAVDYGDTRLAQACQYSAVNCQFIDPRSAINDGDIIADGIHPNTTGSRKLANLIW 240
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|930110743|gb|KPH26623.1| (hypothetical protein ADU60_08890 [Vibrio coralliilyticus]) HSP 1 Score: 70.4774 bits (171), Expect = 6.386e-12 Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = 0
Query: 8 PSIPAEYSIMSKNPPPITIVMDGGGNDVI---SVKD--DCLS------FNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYL----ENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPP--LGDDGIHPIQEGYELLATRIW 140
P + S +P IVMDGGGND++ +V D C + + +C+ + + +LL M ++ VQ V+ +G YY ENL++A+D G L++ C N T+ C D R P + D IHP G + LA IW
Sbjct: 68 PVVEQYQDAQSDDPNINVIVMDGGGNDILLPAAVFDPHKCKTTWYRPELSSKCKSLVDDVYVETVNLLNEMDQNGVQQVIYLGYYYTTGDKENLHQAIDFGDNRLADACTNTTVSCQFVDPRPYIAPEDVLSDNIHPTTSGSQKLAQLIW 217
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|740729500|ref|WP_038514786.1| (SGNH/GDSL hydrolase family protein [Vibrio coralliilyticus] >gi|700288572|gb|AIU68472.1| hypothetical protein JV59_33150 [Vibrio coralliilyticus]) HSP 1 Score: 70.4774 bits (171), Expect = 7.251e-12 Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 18 SKNPPPITIVMDGGGNDVI---SVKD--DCLS------FNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYL----ENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPP--LGDDGIHPIQEGYELLATRIW 140
S +P IVMDGGGND++ +V D C + + +C+ + + +LL M ++ VQ V+ +G YY ENL++A+D G L++ C N T+ C D R P + D IHP G + LA IW
Sbjct: 101 SDDPNINVIVMDGGGNDILLPAAVFDPHKCKTTWYRPELSSKCKSLVDDVYVETVNLLNEMDQNGVQQVIYLGYYYTTGDKENLHQAIDFGDNRLADACTNTTVSCQFVDPRPYIAPEDVLSDNIHPTTSGSQKLAQLIW 240
BLAST of EWM26439.1 vs. NCBI_GenBank
Match: gi|740325427|ref|WP_038162496.1| (SGNH/GDSL hydrolase family protein [Vibrio sp. B183] >gi|672867969|gb|KFI10766.1| hypothetical protein IX95_18150 [Vibrio sp. B183]) HSP 1 Score: 70.4774 bits (171), Expect = 8.038e-12 Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 18 SKNPPPITIVMDGGGNDVI---SVKD--DCLS------FNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYL----ENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPP--LGDDGIHPIQEGYELLATRIW 140
S +P IVMDGGGND++ +V D C + + +C+ + + +LL M ++ VQ V+ +G YY ENL++A+D G L++ C N T+ C D R P + D IHP G + LA IW
Sbjct: 101 SDDPNINVIVMDGGGNDILLPAAVFDPHKCKTTWYRPELSSKCKSLVDDVYVETVNLLNEMDQNGVQQVIYLGYYYTTGDKENLHQAIDFGDNRLADACTNTTVSCQFVDPRPYIAPEDVLSDNIHPTTSGSQKLAQLIW 240 The following BLAST results are available for this feature:
BLAST of EWM26439.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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