EWM26445.1, cds4230 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|585108491|gb|EWM26445.1| (Amino acid transporter, transmembrane [Nannochloropsis gaditana]) HSP 1 Score: 668.692 bits (1724), Expect = 0.000e+0 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query: 1 MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVLR 335
MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVLR
Sbjct: 1 MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVLR 335
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|553191611|ref|XP_005855412.1| (amino acid transport protein [Nannochloropsis gaditana CCMP526] >gi|422293643|gb|EKU20943.1| amino acid transport protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0 Identity = 334/375 (89.07%), Postives = 334/375 (89.07%), Query Frame = 0
Query: 1 MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYC----------------------------------------ALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVLR 335
MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHY ALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVLR
Sbjct: 212 MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYSPRPREFEHAHDLMAVFVDLLPLPETQTLPSLPFLPSALSGALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVLR 586
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|553179064|ref|XP_005852644.1| (amino acid transport protein [Nannochloropsis gaditana CCMP526] >gi|422295890|gb|EKU23189.1| amino acid transport protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0 Identity = 334/375 (89.07%), Postives = 334/375 (89.07%), Query Frame = 0
Query: 1 MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYC----------------------------------------ALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVLR 335
MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHY ALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVLR
Sbjct: 178 MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYSPRPREFEHAHDLMAVFVDLLPLPETQTLPSLPFLPSALSGALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVLR 552
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|694529051|ref|XP_009493479.1| (hypothetical protein H696_01310 [Fonticula alba] >gi|627950077|gb|KCV71901.1| hypothetical protein H696_01310 [Fonticula alba]) HSP 1 Score: 93.2041 bits (230), Expect = 2.404e-17 Identity = 74/269 (27.51%), Postives = 119/269 (44.24%), Query Frame = 0
Query: 25 LSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNIS-PGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKW-QRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIY 291
++W+R + LS+ +V+G LV+G++ + GF + + P L+R T FG AFLF + + LPIE + P F L LS++ + ++ GY+F+G +C N+L N++ P L +I A I+L TY ++ + RE VE A++R + S + +R R+VLV TF +A V FGLIT VG + +L FV PP+++
Sbjct: 260 ITWLRTLKALSYTSVVGTLCLVVGMVVTMVYGFDHHLDDLRTADPT----------------------------------LIRFDTYFHSFGSVAFLFCISFLVLPIERSMRYPRRFWLPLALSVAFVSLSNIVFAILGYLFFG------------------EDICSNILHNLTIPSVLVDVIKVAICIDLIFTYPLIFSAGREIVENALLRPGVVHSLDYLKRCGIRTVLVALTFGLA-QVKSFGLITNLVG-VPMSLLAFVCPPMMH 474
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|470531702|ref|XP_004358231.1| (transmembrane amino acid transporter protein [Acanthamoeba castellanii str. Neff] >gi|440804803|gb|ELR25670.1| transmembrane amino acid transporter protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 90.8929 bits (224), Expect = 1.132e-16 Identity = 72/279 (25.81%), Postives = 121/279 (43.37%), Query Frame = 0
Query: 16 LALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSK---WQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIY 291
L ++PP ++LSW+R ++ L+ ++LG +L+ ++A ++D A S + +P V ++S P LF G AFL+++H LP E F +G S+ L+VA Y+FYG NV+ N+ PG ++ ++ S++L T + L P E +E A++ S+ QRN+ R ++V+ T VA ++ F ++T G L GF+LPP IY
Sbjct: 184 LFVIPPVIMLSWLRSYKVLAPTSILGICALLFSLVATWIDIGMYHEAKSFNDYPAVQ--ITSYP---------------------------------LFLGNAAFLYLIHSVVLPTEQSMANKSRFPVVVGTSIVFVTILNVAFAVTAYLFYG------------------EDTKQNVIDNLHPGVMEILVRIFLSLDLLFTAALFLFPTSEILEFALLDRTLFGKSRNVEMQRNLLRFIMVMVTAAVALAIPFFSVMTGLTGVFGSNLLGFLLPPSIY 409
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|551677388|ref|XP_005841447.1| (hypothetical protein GUITHDRAFT_99946 [Guillardia theta CCMP2712] >gi|428185615|gb|EKX54467.1| hypothetical protein GUITHDRAFT_99946 [Guillardia theta CCMP2712]) HSP 1 Score: 83.9593 bits (206), Expect = 8.209e-15 Identity = 77/280 (27.50%), Postives = 122/280 (43.57%), Query Frame = 0
Query: 22 FVL-LSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMV------------RGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPP 288
FVL +SW++ F LSF + LG S++ +I + +DG + V+S+LSS P P SF ++ G FLF V++ PIE K P +F RA+ ++ TA++++ A + FYG + D VL N+ PG + T + +L LTY ++ A RE +E A + G ++S K + + R+ LV FT +V ++ FGLIT G + F++PP
Sbjct: 22 FVLPVSWLKSFEFLSFTSTLGTLSVLAALITVLIDGLGH-----QGSLDAVTSALSSLPLWP-----------DSF------------ESYFKSLGSVLFLFCVNFLVFPIERSMKNPGNFDRAVNGAVWTTASVNILFAALAFSFYG------------------QETQDIVLNNLGPGNVLTAVKLLLCADLLLTYPLVFAAGREILENAFLNDEEEGEEGNRTEGLPVVSGK--KALLRTSLVGFTLLVG-NLKGFGLITNIAGGLAQGSLAFIIPP 252
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|551661277|ref|XP_005833405.1| (hypothetical protein GUITHDRAFT_138176 [Guillardia theta CCMP2712] >gi|428177546|gb|EKX46425.1| hypothetical protein GUITHDRAFT_138176 [Guillardia theta CCMP2712]) HSP 1 Score: 84.7297 bits (208), Expect = 1.114e-14 Identity = 78/290 (26.90%), Postives = 131/290 (45.17%), Query Frame = 0
Query: 9 WSERGILLA-LLPPFVLLSWVRGFRRLSFLNVLGNASLVLGII-----AIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGD--SIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLI 290
WS+R ++ + ++ LSW+R R+LSF ++LG+ ++V G+I A+ +DG LS L AP L+ TL L FG AFLF + +LPIE+ PE +++A+ + TA ++ G G + +G Q+V + N++ + ++ A ++L T+ I++ P E +E ++ D S + S W RN++RS +V T +A V F L+T + TL FV+PPL+
Sbjct: 121 WSKRVLVTSSIVVGLTFLSWLRDLRKLSFTSLLGDIAIVGGLIITIISALLVDG----------------GMLSGGGTSWLQDHLREAP-------------LLSFSTLPLSFGIIAFLFCTQFLSLPIEASMLHPEQYEQAVFRTFIGTAIANIIFGLIGALTWGA-------SVNQIV-----------ILNLNSSLVVVLVKACLCVDLFFTFPIVIFPALEMIERSL---DLPSDVESVWPRNLFRSCIVCCTAFIALLVPYFALLTDIFAGLGQTLLAFVVPPLL 360
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|923133849|ref|XP_013760390.1| (amino Acid/Auxin Permease family [Thecamonas trahens ATCC 50062] >gi|906553374|gb|KNC46617.1| amino Acid/Auxin Permease family [Thecamonas trahens ATCC 50062]) HSP 1 Score: 78.5666 bits (192), Expect = 1.777e-12 Identity = 64/223 (28.70%), Postives = 106/223 (47.53%), Query Frame = 0
Query: 110 TLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKW-QRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELEN 331
+L LF+G AF F VH LP ++ A+RPE + ++S + A G GY+F+G + V + N+ L T++ A + LT T+ I L P +EEA++ + + W ++N R+V VI VA ++ FGL ++ +GA + + F+LP L Y F + +K L ++ LG V + AT ++ E+ N
Sbjct: 256 SLPLFWGIAAFGFCVHNLVLPFDASARRPEVSGATINAAVSTVLVIYTAFGLFGYLFFGSATKAV------------------ITLNLPHSVLVTVVKIALCVVLTCTFPIQLFPVTCVMEEALLSSRKLRPTYWLEQNALRAVEVIIISGVAIAIPLFGLFSSLMGAFSVSAVVFILPTLFYLKLFWAELTTWDKILNGSIFVLGAVGSVVATVFDVAEIAN 460
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|926650113|ref|XP_013791539.1| (PREDICTED: proton-coupled amino acid transporter 4-like, partial [Limulus polyphemus]) HSP 1 Score: 77.411 bits (189), Expect = 2.644e-12 Identity = 89/337 (26.41%), Postives = 139/337 (41.25%), Query Frame = 0
Query: 10 SERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGL---SMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVE---EAMVRGDSIISSKWQRNIW----RSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATF-------AVWMPKAEKALMITMSTLGIVLMLTATYQNMREL 329
S G L LLP +LLS R R L+ + + N +LG+ IF + F L P+SS P++ SLS P L+FG T + F LP+E+E + P+DF G+ M + VA+G GY+ +G +D G V N+ P ++ F+I + L+Y I P +++ R D +S K QR IW R++LV+ T+ +A ++ + L + VGA+ + V P L+ F + W+ K I T+GI+ T TY +M +
Sbjct: 70 SIHGYLSILLPFVILLSMARSLRHLALASTIANVLQILGLCIIFFNLFQHL-PPTSSR--PLTESLSKFP---------------------------------LYFGTTIYAFEGIGVVLPLENEMQTPQDFGGCNGVLNTGMIIVCCFYVAVGFFGYLKFG------KDVKGSVT------------LNLPAEPAYELVRIMFAIAVFLSYAIQFYVPLQFIWPFIRKKRRLDDWMSMKTQR-IWEYVLRALLVLVTYCLAVAIPRLDLFISLVGAMASSSLALVFPCLLEVIVFWDDDMTSSQWIRLFIKNTCIV--TIGILGFATGTYASMNAI 349
BLAST of EWM26445.1 vs. NCBI_GenBank
Match: gi|873218248|emb|CEM39819.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 77.411 bits (189), Expect = 5.016e-12 Identity = 68/268 (25.37%), Postives = 114/268 (42.54%), Query Frame = 0
Query: 25 LSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLSSAPKPPTPTALSPAPSSPSFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISS-KWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIY 291
L W+R R L++ ++L +A+ + G+ ++ RLVA + PP + + R TL FFG + F LPIE+ K + FK+ L+M L L ++ G GY +G + + V N+ + ++ A S+ L LTY IML P E +EE + + ++ + W+ N+ R+ LV+ T MV+ +V F + + VG+ T F+LP L +
Sbjct: 333 LCWLRDMRHLAWSSLLADATNLFGLGVVYFFDLHRLVAVRKA--PPA-------------------------------VAIARSSTLPFFFGVGLYCFEGIGMVLPIENSMKDKQHFKKLWSLNMLLVTTLFISFGLLGYCAFGSDTDEI------------------VTHNLPHNVISVLVRGALSLGLFLTYPIMLVPVFEILEETLCKDQRLVGTCSWKGNLLRASLVVLTGMVSVAVPNFNIFISLVGSSASTCLAFLLPALFH 549 The following BLAST results are available for this feature:
BLAST of EWM26445.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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