EWM26458.1, cds4227 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|553188271|ref|XP_005854764.1| (short chain dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|553191598|ref|XP_005855408.1| short chain dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422293639|gb|EKU20939.1| short chain dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422294291|gb|EKU21591.1| short chain dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|585108505|gb|EWM26458.1| short chain dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 524.628 bits (1350), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
Query: 1 MTAGKYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMGPLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRSVVRK 259
MTAGKYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMGPLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRSVVRK
Sbjct: 1 MTAGKYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMGPLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRSVVRK 259
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|517220845|ref|WP_018409663.1| (SDR family oxidoreductase [Methylocystis rosea]) HSP 1 Score: 230.72 bits (587), Expect = 1.800e-72 Identity = 131/254 (51.57%), Postives = 163/254 (64.17%), Query Frame = 0
Query: 6 YLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMGP-LNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRSVVR 258
YL+ GG+G IG LA RL + H VHL+ R + +L LA+ + A F+ DVT+ A L +A + GP L+GLAYCVGSINLKPL T DF+ F +N LGAA +++ ALP L A + SV+LFS++AV QGF HA I+ KG VEGLT +LAAELAP VRVN +APSL TPLA+ L S M AIA+ H + RLG DD AA AFLL + E+SWITGQI+GVDGGRS +R
Sbjct: 3 YLIYGGSGAIGSALARRLRHRGHSVHLVGRSEAKLAALATEIDA--------------SFSIADVTNAAGLAEATEAAGPELSGLAYCVGSINLKPLAKLTEADFIADFRVNALGAALSLKNALPALKA---REVAPASVLLFSTIAVTQGFTGHASIAMAKGAVEGLTLSLAAELAPKVRVNCIAPSLIRTPLAKALLASDQMAGAIAQMHALQRLGEPDDVAALGAFLLSD-EASWITGQIMGVDGGRSTLR 238
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|930063701|ref|WP_054165843.1| (short-chain dehydrogenase [alpha proteobacterium AAP38] >gi|929705997|gb|KPF88067.1| short-chain dehydrogenase [alpha proteobacterium AAP38]) HSP 1 Score: 228.409 bits (581), Expect = 1.771e-71 Identity = 133/259 (51.35%), Postives = 164/259 (63.32%), Query Frame = 0
Query: 3 AGKYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSL---HAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMGPLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRSVVR 258
A ++IG TGG G+ LA RL K H +HL++R ++ LA +L HA D + V D +G G + GLAYCVGSI +KPLKAT S DFL AF LN LGAATA+RAA GL A G+VVLFS+VAV+QGF NHA+I+A KG V GL RA+AAE AP VRVN +APSLT TPLA L S+ M + IA HP+ RLG DD AA A FLL ++++ WITGQ++ VDGGRS +R
Sbjct: 2 ASPIIIIGATGGTGQALARRLAAKGHALHLVARDAVRVEDLAQNLGATHAVADVMAEDALADAVALGD-------------RGEG-IAGLAYCVGSIVIKPLKATRSADFLTAFNLNLLGAATALRAAEKGLKAAK------GAVVLFSTVAVEQGFTNHAVIAAAKGAVAGLGRAMAAEWAPHVRVNVIAPSLTRTPLAAPLLSSEQMAQGIAAMHPLARLGEADDLAAMADFLL-SADAGWITGQVLAVDGGRSTLR 239
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|519023360|ref|WP_020179235.1| (SDR family oxidoreductase [Methylopila sp. M107]) HSP 1 Score: 226.483 bits (576), Expect = 1.114e-70 Identity = 134/256 (52.34%), Postives = 163/256 (63.67%), Query Frame = 0
Query: 7 LVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTD----TAALEKAIKGMGPLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRSVVR 258
L+ GG GGIG LA L K VHL+ R + +L LA + A GFT DV D T A E+A KG G L GLAY VG+INLKP +DDF + F +N LGAA A++AALP L+ + E S +LFS+VAVQQGF +HA ++ KG VEGL RALAAELAP VRVNA+APSLT+TPLA LT+S M +AIA H + RLG D AA AFL+ + E+SWITGQ+ GVDGGRS +R
Sbjct: 6 LIYGGAGGIGSALARALAAKGAGVHLVGRDEAKLKALADEIGA--------------GFTVTDVEDDAGVTRATEEAAKG-GALGGLAYAVGTINLKPFAKLAADDFDRDFRINALGAARALQAALPALN----TAQEGASALLFSTVAVQQGFTSHASVAMAKGAVEGLVRALAAELAPKVRVNAIAPSLTETPLAAPLTKSPQMAQAIAGLHALQRLGTPQDIAALGAFLM-SREASWITGQVFGVDGGRSTLR 241
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|1131010894|ref|WP_075772105.1| (short-chain dehydrogenase [Rhodocista sp. MIMtkB3]) HSP 1 Score: 225.328 bits (573), Expect = 2.414e-70 Identity = 137/261 (52.49%), Postives = 172/261 (65.90%), Query Frame = 0
Query: 3 AGKYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTD----TAALEKAIKGMGPLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRSVVRK 259
A +VIG TGGIG LA RL + + L++R+ D+L LA SL G VG DV D T A+++A G G + GLAYCVG+I +KPLKA +++DF++A+ LN GA TA++AA GL A GSVVLFS+VAV+QGFPNH++I++ KG V GL R+LAAE AP+VRVN VAPSLT TPLA L S + IA HPIPRLG DD AAAAAFLL + ++SWITGQ +GVDGGRS +R
Sbjct: 2 AAPIIVIGATGGIGEALARRLSAQKRPLFLVARNGDKLGPLAESL-------------GAVGSAAADVLDDQALTTAVQQADSGDG-IAGLAYCVGTITIKPLKAASAEDFMEAYRLNVAGAVTALKAAEKGLKAAK------GSVVLFSTVAVEQGFPNHSVIASAKGAVAGLARSLAAEWAPAVRVNLVAPSLTRTPLAHPLLTSDQFAQGIANMHPIPRLGEADDQAAAAAFLL-SEDASWITGQTLGVDGGRSTLRN 241
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|1200572264|gb|OUW82978.1| (short-chain dehydrogenase [Thiotrichales bacterium TMED218]) HSP 1 Score: 223.402 bits (568), Expect = 1.324e-69 Identity = 123/253 (48.62%), Postives = 159/253 (62.85%), Query Frame = 0
Query: 5 KYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMGPLN--GLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRS 255
KYL+IG TG IG LA +L HLISR++ +L ++ L FT DV + ++K + N GLAYCVGSI+LKPLK T D Q LN A AI+ G + KK+ GS+VLFSSVA Q+GF NH II++ K +EGLT LAAELAPS+RVN +APSLTD+ ++Q + +S+ + EA+AKAHP+ RLG G+D+AA A FLL + ESSW+TGQI+GVDGGRS
Sbjct: 4 KYLIIGATGSIGSSLAQQLKESNQDAHLISRNEGELKSISEKLG--------------FSFTVADVLEDGFVDKIKSDVSDSNIKGLAYCVGSIDLKPLKRVTESDMNQCMKLNLYSAIEAIQ----GFQDELKKNN--GSIVLFSSVAAQKGFTNHTIIASAKAAIEGLTVTLAAELAPSIRVNCIAPSLTDSMISQSMLKSEVVSEALAKAHPLKRLGEGNDSAALAKFLLRD-ESSWVTGQIIGVDGGRS 235
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|1200546776|gb|OUW58692.1| (short-chain dehydrogenase [Pelagibacteraceae bacterium TMED197]) HSP 1 Score: 223.402 bits (568), Expect = 1.607e-69 Identity = 116/256 (45.31%), Postives = 164/256 (64.06%), Query Frame = 0
Query: 2 TAGKYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMG--PLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRS 255
A K L++G TG IG LA ++V +VHL+ R + L+ LA +++ +T DV + +K +G P+NGLAYCVGSI+LKP+K T D++Q+F LN + A IR A L GS+VLFS+VAV++GF NH+I+S+ KG VEGLT +LAAE AP++RVN +APSLT + ++ + +++ M E+IAK HP+ RLG G D+++ A FLL ++ SSWITGQI+GVDGGRS
Sbjct: 4 NAMKKLILGATGSIGSSLAKKIVNDGGEVHLVGRDEASLSKLAQEMNST--------------YTVCDVLEENFSDKIFDDLGDTPINGLAYCVGSIDLKPIKITKKSDYMQSFNLNLISAVEIIRKASDSLKQN------KGSIVLFSTVAVKRGFTNHSIVSSAKGAVEGLTVSLAAEFAPNIRVNCIAPSLTKSKISNFILKNEKMAESIAKMHPLKRLGEGSDSSSVANFLLSDN-SSWITGQILGVDGGRS 238
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|1200599124|gb|OUX08613.1| (short-chain dehydrogenase [Pelagibacteraceae bacterium TMED239]) HSP 1 Score: 223.016 bits (567), Expect = 1.798e-69 Identity = 116/253 (45.85%), Postives = 166/253 (65.61%), Query Frame = 0
Query: 5 KYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMG--PLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRS 255
K L++G TG IG LA +++ +VHL+ R + L+ LAS L++ FT DV + +K +G P+NGLAYCVGSI+LKP+K T D++Q+F LN + A IR A L Q K GS+VLFS+VAV++GF NH+I+S+ KG +EGLT +LAAE AP++RVN +APS++ + +A + +++ M ++IAK HP+ R+G G D+A+ A FLL ++ SSWITGQI+GVDGGRS
Sbjct: 2 KKLILGATGSIGSSLAKKVIADGGEVHLVGRDKSSLSDLASELNST--------------FTTCDVLEENFSDKIFSDIGETPINGLAYCVGSIDLKPIKMTKKSDYMQSFNLNLISATEIIRRASDNLK-QNK-----GSIVLFSTVAVRRGFTNHSIVSSAKGAIEGLTVSLAAEFAPNIRVNCIAPSISKSKIANFILKNEKMADSIAKMHPLKRVGEGSDSASVANFLLSDN-SSWITGQILGVDGGRS 233
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|1200545459|gb|OUW57436.1| (short-chain dehydrogenase [Pelagibacteraceae bacterium TMED197]) HSP 1 Score: 222.631 bits (566), Expect = 3.021e-69 Identity = 115/253 (45.45%), Postives = 164/253 (64.82%), Query Frame = 0
Query: 5 KYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMG--PLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRS 255
K L++G TG IG LA ++V +VHL+ R + L++LA +++ +T DV + +K +G P+NGLAYCVGSI+LKP+K T D++Q+F LN + A IR A L GS+VLFS+VAV++GF NH+I+S+ KG VEGLT +LAAE AP++RVN +APSLT + ++ + +++ M E+IAK HP+ RLG G D+++ A FLL ++ SSWITGQI+GVDGGRS
Sbjct: 7 KKLILGATGSIGSSLAKKIVNDGGQVHLVGRDEASLSNLAKEINST--------------YTICDVLEENFSDKIFHDLGDTPINGLAYCVGSIDLKPIKITKKSDYMQSFNLNLISAVEIIRKASDSLKQN------KGSIVLFSTVAVKRGFTNHSIVSSAKGAVEGLTVSLAAEFAPNIRVNCIAPSLTKSKISNFILKNEKMAESIAKMHPLKRLGEGSDSSSVANFLLSDN-SSWITGQILGVDGGRS 238
BLAST of EWM26458.1 vs. NCBI_GenBank
Match: gi|764609126|ref|WP_044429136.1| (NAD(P)-dependent oxidoreductase [Skermanella aerolata] >gi|763834775|gb|KJB95228.1| short-chain dehydrogenase [Skermanella aerolata KACC 11604]) HSP 1 Score: 219.55 bits (558), Expect = 5.694e-68 Identity = 136/262 (51.91%), Postives = 164/262 (62.60%), Query Frame = 0
Query: 1 MTAGKYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTGTHTGVEGTVGFTDVDVTDTAALEKAIKGMGP----LNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRSVVR 258
MTA +V G GGIG LA RL + L R D++ LA L A GV DV D AA+ ++ G + G+AYCVGSI++KPLKAT +DF+QA+ LN LGA AIRAA GL KS + GSVVLFS+VAVQQGF NHA+I++ KG VEGL R+LAAE AP VRVN VAPSLT TPLA LT + M ++IA H + R+G +D AA AAFLL ES WITGQ+ GVDGGRS +R
Sbjct: 1 MTA-PIIVFGANGGIGEALARRLARAGAPLFLTGRSADKIGPLADDLKA------RHGV--------CDVLDEAAVSAIVQEAGQDGEGIAGIAYCVGSIDIKPLKATKDEDFIQAYRLNVLGAVNAIRAAEKGL-----KSAK-GSVVLFSTVAVQQGFANHALIASAKGAVEGLGRSLAAEFAPHVRVNVVAPSLTRTPLAHGLTSNDQMVQSIAGLHALGRIGEPEDIAAMAAFLL-TKESGWITGQVFGVDGGRSSLR 240 The following BLAST results are available for this feature:
BLAST of EWM26458.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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