EWM26450.1, cds4220 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|585108497|gb|EWM26450.1| (60s acidic ribosomal protein p2 [Nannochloropsis gaditana]) HSP 1 Score: 416.387 bits (1069), Expect = 5.473e-147 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 Query: 1 MGTLDLKKKPLSLNYSFSSMRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGGGGGGGGAAAAAAPGAADAGAEKEKKKEEKEEEEADLGGAMDMFGVSLRRECQVAAMATKKHLFQRPANLWLPLHLYPSLPEGLVYSPFSRLVFFGPLYRAGDAERSSGKVLDGKSGNSDGLSF 210 MGTLDLKKKPLSLNYSFSSMRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGGGGGGGGAAAAAAPGAADAGAEKEKKKEEKEEEEADLGGAMDMFGVSLRRECQVAAMATKKHLFQRPANLWLPLHLYPSLPEGLVYSPFSRLVFFGPLYRAGDAERSSGKVLDGKSGNSDGLSF Sbjct: 1 MGTLDLKKKPLSLNYSFSSMRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGGGGGGGGAAAAAAPGAADAGAEKEKKKEEKEEEEADLGGAMDMFGVSLRRECQVAAMATKKHLFQRPANLWLPLHLYPSLPEGLVYSPFSRLVFFGPLYRAGDAERSSGKVLDGKSGNSDGLSF 210
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|553188278|ref|XP_005854766.1| (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526] >gi|553191617|ref|XP_005855414.1| s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526] >gi|422293645|gb|EKU20945.1| s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526] >gi|422294293|gb|EKU21593.1| s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 211.46 bits (537), Expect = 5.370e-63 Identity = 114/119 (95.80%), Postives = 114/119 (95.80%), Query Frame = 0 Query: 20 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGGGGGGGGAAAAAAPGAADAGAEKEKKKEEKEEEEADLGGAMDMFG--VSLRR 136 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEG LSTLLKDLEGKDVETLIEEGSKLLATFGGGGGGGGGAAAAAAPGAADAGAEKEKKKEEKEEEEADLGGAMDMFG LRR Sbjct: 1 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGLLSTLLKDLEGKDVETLIEEGSKLLATFGGGGGGGGGAAAAAAPGAADAGAEKEKKKEEKEEEEADLGGAMDMFGALTQLRR 119
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|1024075057|gb|KZV68042.1| (ribosomal protein 60S [Peniophora sp. CONT]) HSP 1 Score: 86.6557 bits (213), Expect = 1.732e-18 Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 0 Query: 20 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATF 84 MRHLA YLLL++GGN +PSA+DV LSAVG+EADE RLSTL+ +LEGKDV LI EG+ LA+ Sbjct: 1 MRHLAAYLLLQVGGNASPSAADVKKVLSAVGIEADEDRLSTLISELEGKDVAALINEGAGKLASV 65
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|1069189232|ref|XP_018065456.1| (ribosomal protein 60S [Phialocephala scopiformis] >gi|972534467|gb|KUJ11101.1| ribosomal protein 60S [Phialocephala scopiformis]) HSP 1 Score: 86.2705 bits (212), Expect = 2.586e-18 Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 0 Query: 20 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATF 84 M+HLA YLLL LGGN +PSA D+T L +VG+EADE RL+TLLK+LEGKD+ LI EGS LA+ Sbjct: 1 MKHLAAYLLLTLGGNSSPSAKDITAVLESVGIEADEERLTTLLKELEGKDINELIAEGSSKLASV 65
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|1089722433|ref|XP_018707197.1| (Ribosomal protein 60S [Isaria fumosorosea ARSEF 2679] >gi|1025684019|gb|OAA71316.1| Ribosomal protein 60S [Isaria fumosorosea ARSEF 2679]) HSP 1 Score: 84.7297 bits (208), Expect = 1.014e-17 Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 0 Query: 20 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATF 84 M+HLA YLLL LGGNE+PSA D+T LSAVG+EADE R+ TLL +L+GKD+ LI EGS LA+ Sbjct: 1 MKHLAAYLLLTLGGNESPSAKDITGVLSAVGIEADEERVKTLLSELKGKDINELIAEGSSKLASV 65
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|1025692789|gb|OAA80071.1| (60S acidic ribosomal protein P2 [Cordyceps confragosa RCEF 1005]) HSP 1 Score: 84.3445 bits (207), Expect = 1.159e-17 Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 0 Query: 20 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLAT 83 M+HLA YLLL LGGNE+PSA D+++ LSAVG+EADE R TLL +L+GKD+ LI EGS LA+ Sbjct: 1 MKHLAAYLLLTLGGNESPSAKDISSVLSAVGIEADEERTKTLLSELKGKDINELISEGSSKLAS 64
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|452848075|gb|EME50007.1| (hypothetical protein DOTSEDRAFT_68758 [Dothistroma septosporum NZE10]) HSP 1 Score: 83.9593 bits (206), Expect = 1.623e-17 Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 0 Query: 20 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATF 84 M+HLA YLLL+LGGN +PSA D+ LSAVG+EA+E RLSTLL +LEGKD+ LI EGS LA+ Sbjct: 1 MKHLAAYLLLQLGGNTSPSAGDIKEVLSAVGIEAEEERLSTLLSELEGKDINELISEGSAKLASV 65
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|1032906914|gb|OAR02099.1| (hypothetical protein LLEC1_08068 [Cordyceps confragosa]) HSP 1 Score: 83.9593 bits (206), Expect = 1.758e-17 Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 0 Query: 20 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATF 84 M+HLA YLLL LGGNE+PSA D+T LSAVG+EADE R+ TLL +L+GKD+ LI EG+ LA+ Sbjct: 1 MKHLAAYLLLTLGGNESPSAKDITGVLSAVGIEADEERVKTLLSELKGKDINELISEGASKLASV 65
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|219127329|ref|XP_002183890.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404613|gb|EEC44559.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 82.8037 bits (203), Expect = 6.025e-17 Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = 0 Query: 20 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGGGGGGGGAAAAAAPGAADAGAEKEKKKEEKEEEEADLGGAMDMFG 131 M+HLA YLLL+LGGN +P+ D+T ALSAVGVE D L +L DLEG+D+E L+E G+ LLATFGGG A A A +EK +E++EEEE DLGG MDMFG Sbjct: 1 MKHLAAYLLLQLGGNASPTKDDITQALSAVGVEVDGADLDRMLADLEGQDLEALLESGNALLATFGGG------GGGGGAAAAGGEAAVEEKVEEKEEEEEMDLGGGMDMFG 106
BLAST of EWM26450.1 vs. NCBI_GenBank
Match: gi|449548096|gb|EMD39063.1| (hypothetical protein CERSUDRAFT_112755 [Gelatoporia subvermispora B]) HSP 1 Score: 82.4185 bits (202), Expect = 6.322e-17 Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 0 Query: 20 MRHLATYLLLKLGGNENPSASDVTTALSAVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATF 84 MR++A YLLL++GGN +PSA D+ T L AVG+EADE RLS L+ +LEGKDV TLI EGS L++ Sbjct: 1 MRYIAAYLLLQIGGNASPSAEDIKTVLGAVGIEADEERLSKLVSELEGKDVNTLIAEGSAKLSSV 65 The following BLAST results are available for this feature:
BLAST of EWM26450.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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