EWM26457.1, cds4217 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26457.1 vs. NCBI_GenBank
Match: gi|585108504|gb|EWM26457.1| (class 3 [Nannochloropsis gaditana]) HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0 Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0
Query: 1 MFLQHDYRRWKVVLLKFIGLVQFVRSRQLLRTNDTATPRINNSFIVTHSKERKFSDSPHVLHISSVAGPGPENRLLGVPLGGESISFFPLVQIVLDPRRVQDRSPSRHKLFPSCGFAEPIIDAPGYCPLVRILERGADMNYDSILRGFTTVKNMYETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATAKPPPYVPRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVPFGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSACHGCSYLCWSVQGLDDPEDRCYFAEHPWPCPYTAWDGK 505
MFLQHDYRRWKVVLLKFIGLVQFVRSRQLLRTNDTATPRINNSFIVTHSKERKFSDSPHVLHISSVAGPGPENRLLGVPLGGESISFFPLVQIVLDPRRVQDRSPSRHKLFPSCGFAEPIIDAPGYCPLVRILERGADMNYDSILRGFTTVKNMYETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATAKPPPYVPRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVPFGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSACHGCSYLCWSVQGLDDPEDRCYFAEHPWPCPYTAWDGK
Sbjct: 1 MFLQHDYRRWKVVLLKFIGLVQFVRSRQLLRTNDTATPRINNSFIVTHSKERKFSDSPHVLHISSVAGPGPENRLLGVPLGGESISFFPLVQIVLDPRRVQDRSPSRHKLFPSCGFAEPIIDAPGYCPLVRILERGADMNYDSILRGFTTVKNMYETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATAKPPPYVPRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVPFGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSACHGCSYLCWSVQGLDDPEDRCYFAEHPWPCPYTAWDGK 505
BLAST of EWM26457.1 vs. NCBI_GenBank
Match: gi|553180277|ref|XP_005853377.1| (class 3 [Nannochloropsis gaditana CCMP526] >gi|553191614|ref|XP_005855413.1| class 3 [Nannochloropsis gaditana CCMP526] >gi|422293644|gb|EKU20944.1| class 3 [Nannochloropsis gaditana CCMP526] >gi|422295682|gb|EKU22981.1| class 3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 767.689 bits (1981), Expect = 0.000e+0 Identity = 366/367 (99.73%), Postives = 366/367 (99.73%), Query Frame = 0
Query: 139 MNYDSILRGFTTVKNMYETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATAKPPPYVPRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVPFGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSACHGCSYLCWSVQGLDDPEDRCYFAEHPWPCPYTAWDGK 505
MNYDSILRGFTTVKNMYETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATA PPPYVPRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVPFGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSACHGCSYLCWSVQGLDDPEDRCYFAEHPWPCPYTAWDGK
Sbjct: 1 MNYDSILRGFTTVKNMYETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATANPPPYVPRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVPFGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSACHGCSYLCWSVQGLDDPEDRCYFAEHPWPCPYTAWDGK 367
BLAST of EWM26457.1 vs. NCBI_GenBank
Match: gi|585109275|gb|EWM27098.1| (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 121.324 bits (303), Expect = 5.851e-26 Identity = 104/359 (28.97%), Postives = 162/359 (45.13%), Query Frame = 0
Query: 155 YETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQA-GTATAKPPPY---VPRGYHSQR---LIFTSS--NGTKDP--PIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVPFGIGDIIPQ----ALSLC--------WPVRGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSACHGCSYLCWSVQGLDDPEDRCYF 490
+ ++ P D LP + + PLP + + +E E+ T Y+ YR I NLY V ++ GT +A+ P +P + +QR L +T S G P P SF + ++VV+RGTI+ ++ +++A+P++ + + G +H GFF+ L + + ++F GHSLG + L++ P VE+ +FGAP GD F FNA + R +F +G S + IGD I Q A++ C + G P Q N + Y A GG V F M N + W V SP A H CSY+C++ + D D+C F
Sbjct: 140 WGSKIRPPVDPLRELPQPLEVLSMPLPALVPTEK-VEAEKPTYYFLYRAIQNLYAAVGANARSRGTDSAQEPMLNLALPPAWTNQREYTLRWTGSLVAGVLQPQAPFAVSFTRDKEMLVVVRGTIYSAEWQRNFQYQHADPTE--TAAYRMPGGVHAGFFAVFKDLAEALVDDEIKRQAPSKVTFTGHSLGGSVGALLAFYTTHVLPRTQVELVSFGAPNVGDATFSSAFNARVRNRHLAFSGVG-----SEGDSYFIGDWISQVPCGAVTTCPLLTEMSSVDLNGSPSGQR-QANESYSYTALGGSVPFTPAQMQNGRTWALRSDVAGFRYSPVAAHTCSYMCFTAPSVGDAYDQCVF 489
BLAST of EWM26457.1 vs. NCBI_GenBank
Match: gi|585109778|gb|EWM27512.1| (lipase class 3 [Nannochloropsis gaditana]) HSP 1 Score: 117.857 bits (294), Expect = 6.535e-25 Identity = 97/318 (30.50%), Postives = 143/318 (44.97%), Query Frame = 0
Query: 190 IEKERQTAYWYYRNILNLYT----YVKRCVQAGTATAKPPPYVPRGYHSQRLIFTSSNGTKDP----PIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILA---LRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVP--FGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPS---ACHGCSYLCWSVQGLDDPEDRCYFA 491
I ER T Y+ YR IL +Y+ Y + +Q+ R Y L T+ N P PI S +KG ++VV+RGTI+ +D + +A+ D GR H+G +S + + +E +++ +L GHSLGA ++ L +P V+V FG P GDT F + + +N +R +++G+G S+P P + GDI Q C P GC KY V FY DMPN + WN + V + S A H CSY+CW+ + D + RCYFA
Sbjct: 154 IHAERPTYYYCYRLILLMYSIAFEYERSDMQSILPKLVEDWDRERWYMVDYLKQTNINWKNIPHRQSPIAVSMMKGDRMMVVIRGTIWTEEWCKDFQYRWADDED-----GLFPGRTHEGMYSVFVDFYKGLEEEVESRQPAHVL-VTGHSLGAGIANMIGLRLENSLQHKP--RVDVIGFGGPNTGDTDFADIYRRTVN--SRHLIFLGHG---SSPNPNMYTAGDITAQYT--CEPYPGCDVLATGPFGKTYKYVRPHNQVPFYPEDMPNPKTWNDIANVRRIIPSTKRVIASHICSYICWTSLAVGDLDSRCYFA 456
BLAST of EWM26457.1 vs. NCBI_GenBank
Match: gi|585101028|gb|EWM21025.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 115.161 bits (287), Expect = 1.459e-23 Identity = 121/418 (28.95%), Postives = 172/418 (41.15%), Query Frame = 0
Query: 145 LRGFTTVKNMYETEKEPAQDDESSLP--VRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATAKPPPYVPR-------------------GYHSQRLIFTSSNGTK-DPPIGQSFV-------------KGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRL-HKGFFSEALTLTQQIEMGLDAH-PTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQ-FNALLNLRARSFMYIGNGLV-------TSAPVP-----FGIGDIIPQALSLCWPVRGCPGTQNP-----------DMNAAIKYEATGGIVAFYSTDM---PNTQEWNRVDQVVT-----LDSSPSACHGCSYLCW---SVQGLDDPEDRCYF 490
LR F+T + Y D +++P + DIG +P IED+AL+++ER W +R I+N Y Y R G A+ R GY +QRL++ + PIGQ+F +VVV+RGT+F + F S + + G+ G + KGFF+ L QI L AH L+F GHSLG + L+ A + PDL + + FGAP D F E+ ++ +NL R YIG+GL+ +S P P FG+GDI Q C V CP P DM I+ G V ++ D+ + W + LD+ A H C+Y CW +G E RCYF
Sbjct: 241 LRLFSTEHDDYFPSFPWRDGDRTAVPPPHVLEDIG-IVPDYIEDKALLDRERPVYRWCWRQIVNFYGYTHRWHDLGLERAQKVEEARRDGFPSPPPSRPLPLLPAHPGYGNQRLLWLPEEENRVQRPIGQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSN--FRLHEASQDVLRAYGMEGAIIPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYYARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINL--RQLTYIGSGLLPPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFAVQADTRLDAGLIATHVCAYACWVSTGGEGAAGEETRCYF 653
BLAST of EWM26457.1 vs. NCBI_GenBank
Match: gi|585105507|gb|EWM24145.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 104.375 bits (259), Expect = 1.632e-20 Identity = 78/278 (28.06%), Postives = 119/278 (42.81%), Query Frame = 0
Query: 229 PRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVP----FGIGDIIPQALSLCWPV-----RGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVV-------TLDSSPSACHGCSYLCWSVQGLDDPEDRCYF 490
P + +Q + F G PIGQSF + +VV+ RGT+F D F+ + + GL GR+H G A SLG A Q+ + L L ++ FG+P GD F + NA +NLR +Y+G+G + PV +G+GD+I Q C+ + +NPD + ++ G V FY++D+ NT+ W + + + ACH CSY CW+ + D + RCYF
Sbjct: 119 PELWENQNVYFLKDPGGWKWPIGQSFTREQRMVVIFRGTMFPGGWETD--FQTSYAAAAATARRGLPGRVHYGQCGWA-------------------------SLGGAISQVAAAFLVKHHRHLKIDCVTFGSPQVGDRTFTDFLNANVNLRRA--VYVGSGQLNE-PVQRGLNYGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYF 366
BLAST of EWM26457.1 vs. NCBI_GenBank
Match: gi|585101868|gb|EWM21613.1| (lipase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 103.99 bits (258), Expect = 6.114e-20 Identity = 112/422 (26.54%), Postives = 171/422 (40.52%), Query Frame = 0
Query: 109 KLFPSCGFAEPIIDAPGYCPLVRILERGADMNYDSILRGFTTVKNMYETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATAKP--PPYVPRGYHSQRLIF---TSSNGT-KDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKG---FFSEALT-LTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPIL--------------ALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTS---APVP-FGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIK------YEATGGIVAFYSTDMPNTQEWNRVDQVVTLDSSPSAC---HGCSYLCWSVQGLDDPEDRCYFAEH 493
KLFP G E ++ CP+V +E +N S+ +T +E Q+ + +LP D+ + + D+ I E+ + Y+ YR Y Y TA K P P G+ Q + F TS G ++ P K H++V MRGT+++ +E+ P++ T G++H G F E L L Q I+ + + ++ GHS+G ++ L A R + VEV GA GD F E+ +N+R + Y+G G + AP + +GD++ QA + P + N + K Y VA Y T + NT W D+ LD + A H C Y CW G+ DP RCYF E
Sbjct: 164 KLFPWAGVIEFLVSVNAVCPIVDFVETIVAVNLPSV---------RIQTTQEYPQNPDGTLPRPWKDLKGCDAWFV-DEDTIRAEKASYYYVYRMYDTFYAYA-----TDTAEDKELLDPLAP-GWGPQTVHFRNATSVGGQWRESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNE---TVPYFEGKVHSGAFQLFKEMLPPLLQDIK-----SRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVR--NIRYLGEGWIEDGLDAPGKMYTMGDVVAQAPGVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWR--DKTNMLDPARMAVVLSHKCPYTCWLTDGMGDPNTRCYFQEQ 557
BLAST of EWM26457.1 vs. NCBI_GenBank
Match: gi|553188297|ref|XP_005854770.1| (lipase-related protein [Nannochloropsis gaditana CCMP526] >gi|422294286|gb|EKU21586.1| lipase-related protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 94.3597 bits (233), Expect = 6.146e-17 Identity = 102/440 (23.18%), Postives = 166/440 (37.73%), Query Frame = 0
Query: 109 KLFPSCGFAEPIIDAPGYCPLVRILERGADMNYDSILRGFTTVKNMYETEKEPAQDDESSLPVRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQ----------AGTATAKPPPYVPRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALR---------------------------------------RPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIG---NGLVTSAPVPFGIGDIIPQALSLCWPVRGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEW----NRVDQVVTLDSSPSACHGCSYLCWSVQGLDDPED--RCYF 490
+L P+C ++ CP+VR LE+ L ++ + P+ + + LP +A LP I D+ + + ER T YWYY + + + ++ A T A P ++ G+ + RLI + S P + K H+VV+MRG+ + + F Y ++ + G+ GR+H+GF + + ++ ++ +S AG S+G A + LA + RP L + G P GD F F +N R+ +F+ G G + + IGD + Q C+PV C G Y GG++ MPN W N + A H CSY CW+ +GL P + +CYF
Sbjct: 105 RLNPTCAVIGFLLRTVPVCPVVRQLEK-------YFLGTPPSLNQFFANTLVPSPEMNAYLPKPLAVYPSMLP-DIIDEEVADAERHTIYWYYAMVALAWRNMADILRPEEARAAGRPAQTFEAYPGWHLADGWETGRLIESQSG-----PFAVTMAKNRHLVVLMRGSTTDEDWAAN--FNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVE-RIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGS----TETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCWATRGLPPPYEGSKCYF 524
BLAST of EWM26457.1 vs. NCBI_GenBank
Match: gi|813225428|ref|XP_012211791.1| (hypothetical protein SPRG_15668 [Saprolegnia parasitica CBS 223.65] >gi|641522196|gb|KDO17503.1| hypothetical protein SPRG_15668 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 63.1586 bits (152), Expect = 3.455e-7 Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query: 298 LHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNG-LVTSAP 396
+H GF+ +TL Q + + P ++ GHSLG A + + LAL+RP L + V+N+G+P G+ F E FNA + +F I +G +VT P
Sbjct: 113 VHSGFYHAYVTLEQHLHAAIGKIPDKSVVICTGHSLGGALATIAAMDLALKRPSLRLAVYNYGSPRVGNHAFQELFNATMP----AFRVINDGDIVTQYP 208 The following BLAST results are available for this feature:
BLAST of EWM26457.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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