EWM26454.1, cds4216 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|585108501|gb|EWM26454.1| (hypothetical protein Naga_100144g13 [Nannochloropsis gaditana]) HSP 1 Score: 837.41 bits (2162), Expect = 0.000e+0 Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0
Query: 1 MKHKFRFSGSVSLPPSWLPVLGIFLSLRASAFQSVYLRKNIVSQQTSALHMYTTFYRSPCPHEDLPHSRKSLVRLWQIRSDQQHTEDYFRFIEGKEEPDKCDQASVIIGKGKLGQALVQWGGMGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSYDVDQDI 401
MKHKFRFSGSVSLPPSWLPVLGIFLSLRASAFQSVYLRKNIVSQQTSALHMYTTFYRSPCPHEDLPHSRKSLVRLWQIRSDQQHTEDYFRFIEGKEEPDKCDQASVIIGKGKLGQALVQWGGMGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSYDVDQDI
Sbjct: 1 MKHKFRFSGSVSLPPSWLPVLGIFLSLRASAFQSVYLRKNIVSQQTSALHMYTTFYRSPCPHEDLPHSRKSLVRLWQIRSDQQHTEDYFRFIEGKEEPDKCDQASVIIGKGKLGQALVQWGGMGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSYDVDQDI 401
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|553180283|ref|XP_005853379.1| (hypothetical protein NGA_0116102 [Nannochloropsis gaditana CCMP526] >gi|553191635|ref|XP_005855420.1| hypothetical protein NGA_0116101 [Nannochloropsis gaditana CCMP526] >gi|422293651|gb|EKU20951.1| hypothetical protein NGA_0116101 [Nannochloropsis gaditana CCMP526] >gi|422295684|gb|EKU22983.1| hypothetical protein NGA_0116102 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 466.077 bits (1198), Expect = 2.917e-163 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query: 180 MQSACLETLLKRYGLANKKTTQCLPYFSISPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSYDVDQDI 401
MQSACLETLLKRYGLANKKTTQCLPYFSISPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSYDVDQDI
Sbjct: 1 MQSACLETLLKRYGLANKKTTQCLPYFSISPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSYDVDQDI 222
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|551669787|ref|XP_005837652.1| (hypothetical protein GUITHDRAFT_151218 [Guillardia theta CCMP2712] >gi|428181809|gb|EKX50672.1| hypothetical protein GUITHDRAFT_151218 [Guillardia theta CCMP2712]) HSP 1 Score: 221.09 bits (562), Expect = 4.094e-65 Identity = 121/325 (37.23%), Postives = 189/325 (58.15%), Query Frame = 0
Query: 77 QIRSDQQHTEDYFRFIEGKEEPDKCDQASVIIGKGKLGQALVQWGGMGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSI-SPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDL---HVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSYDV 397
Q+ S+ Q E+Y + GKE+ D SVI+G G++G+ L G G DD+++GR IP V L FP+YVCVP E+E+VI CP+ K +DLVF+Q +E +LK+Y L + TQ LPYF++ S G P + V + GEPK+AG+T +CG W GA+ +RL + + H M Y WR+ MLE+++FDS+F L+ ++ + GE+ Q+H EE +M+ E++R++ +AV L+ VE R+ ++ + R ++ +YPFRNG + S+ GFP P P H EYL+ +E+ ++ +D+
Sbjct: 46 QVWSNPQALEEYQDLLSGKEQVASVDTPSVIVGGGRVGEMLR--GAGGGDDVVVGRGGQIPEVHE-----GLESFPVYVCVPTSELENVIRSCPQSKLDDLVFVQDGMIEPILKKYALCGNENTQMLPYFTLFSKGGRPQDSLVDLG-TDAYGEPKYAGETSICGKWAGALKQRLDRLNFCHRHSRTMFYRDWRRAMLEKVIFDSVFPLVGALNKGI---SIGEVGQSHTEECQEMITEIARSLPGTLAVTLMYGVEERLFAYSQHDNVEFRPCKI---EQYPFRNGFWYTFSQQAKQIGFPDPTPMHSEYLELAKEKGIIDFDL 356
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|553180286|ref|XP_005853380.1| (hypothetical protein NGA_0116202 [Nannochloropsis gaditana CCMP526] >gi|553191639|ref|XP_005855421.1| hypothetical protein NGA_0116201 [Nannochloropsis gaditana CCMP526] >gi|422293652|gb|EKU20952.1| hypothetical protein NGA_0116201 [Nannochloropsis gaditana CCMP526] >gi|422295685|gb|EKU22984.1| hypothetical protein NGA_0116202 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 209.92 bits (533), Expect = 4.180e-63 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
Query: 1 MKHKFRFSGSVSLPPSWLPVLGIFLSLRASAFQSVYLRKNIVSQQTSALHMYTTFYRSPCPHEDLPHSRKSLVRLWQIRSDQQHTEDYFRFIEGKEEPDK 100
MKHKFRFSGSVSLPPSWLPVLGIFLSLRASAFQSVYLRKNIVSQQTSALHMYTTFYRSPCPHEDLPHSRKSLVRLWQIRSDQQHTEDYFRFIEGKEEPD
Sbjct: 63 MKHKFRFSGSVSLPPSWLPVLGIFLSLRASAFQSVYLRKNIVSQQTSALHMYTTFYRSPCPHEDLPHSRKSLVRLWQIRSDQQHTEDYFRFIEGKEEPDN 162
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|299117349|emb|CBN75305.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 213.001 bits (541), Expect = 1.558e-62 Identity = 125/328 (38.11%), Postives = 176/328 (53.66%), Query Frame = 0
Query: 77 QIRSDQQHTEDYFRFIEGKEEPDKCDQASVIIGKGKLGQALVQWGGMGEDDLLLGRDDCIPTVLTVSNG-------CTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQ--DLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSY 395
Q+ S+ Q +DY ++G D DQ SVIIG+GKLG AL G MGED ++LGR + IP L S+G L FPIYVCVPE EV +VI CP +K++DLVFM S CLE LLK G+ + TQ YFS+ G + + GEPK AG+T VCG W+GA A RL++ LH Y WR+ M E+L+FD L+ +H T G + Q H EE+ DM++EL + + +AV L+ R+ +A G DR+ R + + N +S + F P P H EYL++ +++ + ++
Sbjct: 2 QVWSNPQAVQDYKDLLDGNAPEDTIDQPSVIIGRGKLGTALASMG-MGED-VVLGRGEAIPDSLPCSSGKGEDGEPAMLQNFPIYVCVPEEEVAAVIDSCPDDKKDDLVFMSSGCLEPLLKSRGMCRGEQTQATLYFSVDKVGGRAVDAMTVIGTDGRGEPKLAGETAVCGKWKGAFAMRLQQSPFGLHCSTEYYLEWRRVMFEKLIFDCAVNLVGALHK---FPTVGYVVQYHAEELVDMLFELKNTLRSTLAVSLMNGYPERL--IAYGDQVGDRQTTRMDARTFKWYNEFFYDISNTALKAKFGDPCPMHTEYLNYGKDKGIFTF 322
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|585104990|gb|EWM23770.1| (hypothetical protein Naga_100411g4 [Nannochloropsis gaditana] >gi|585104991|gb|EWM23771.1| hypothetical protein Naga_100411g4 [Nannochloropsis gaditana] >gi|585104992|gb|EWM23772.1| hypothetical protein Naga_100411g4 [Nannochloropsis gaditana] >gi|585104993|gb|EWM23773.1| hypothetical protein Naga_100411g4 [Nannochloropsis gaditana]) HSP 1 Score: 197.978 bits (502), Expect = 1.690e-59 Identity = 94/109 (86.24%), Postives = 102/109 (93.58%), Query Frame = 0
Query: 238 VCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKP 346
+CGTWRGAVAERLRK+DLHVEVMD TYWR+ MLERLLF S+FGLLACVHA SGEKTY +LAQNHWE+IDDMV ELSRA+ANIMAVVLLT+VERRVRGLAEGP WRDRKP
Sbjct: 1 MCGTWRGAVAERLRKKDLHVEVMDCTYWRRQMLERLLFGSIFGLLACVHAGSGEKTYVQLAQNHWEKIDDMVRELSRAVANIMAVVLLTYVERRVRGLAEGPSWRDRKP 109
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|585100398|gb|EWM20623.1| (hypothetical protein Naga_101524g1 [Nannochloropsis gaditana]) HSP 1 Score: 186.037 bits (471), Expect = 1.234e-54 Identity = 85/91 (93.41%), Postives = 85/91 (93.41%), Query Frame = 0
Query: 123 MGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFGL 213
MGEDDLLLGRDDCIPTVLTVSNGC LNMFPI VCVPEWEVESVILGCPKEK NDLVFMQSACLETLLKRYG ANKKTTQCLP FSISPFG
Sbjct: 1 MGEDDLLLGRDDCIPTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGF 91
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|553180048|ref|XP_005853322.1| (hypothetical protein NGA_0718300 [Nannochloropsis gaditana CCMP526] >gi|422295724|gb|EKU23023.1| hypothetical protein NGA_0718300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 181.8 bits (460), Expect = 5.430e-53 Identity = 83/91 (91.21%), Postives = 84/91 (92.31%), Query Frame = 0
Query: 123 MGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFGL 213
MG DDLLLGRDDC+PTVLTVSNGC LNMFPI VCVPEWEVESVILGCPKEK NDLVFMQSACLETLLKRYG ANKKTTQCLP FSISPFG
Sbjct: 1 MGVDDLLLGRDDCLPTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGF 91
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|546324542|ref|XP_005718399.1| (unnamed protein product [Chondrus crispus] >gi|507115003|emb|CDF38506.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 140.198 bits (352), Expect = 1.371e-34 Identity = 98/307 (31.92%), Postives = 158/307 (51.47%), Query Frame = 0
Query: 77 QIRSDQQHTEDYFRFIEGKEEPD-KCDQASVIIGKGKLGQALVQWGGMGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFGL-PVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTC-REYPFRNGMLRSLSRSFTSRGFPSPMPTH 380
Q SD T++YF F+ + + D S I+G G++G L + G DL++ R IP P+Y+C ++E +I CP+ K++DLVF+Q+ LE +L+R+ ++ + T+ YF+IS P++G +++T+ E G T VCG W GA ER+ K L +++ +R+ LE+L++ S+F L+ VH G GE+AQ H E+ ++ EL+ I + V +L +E+R+ LA G R + PT +E+ +RNG S GFP P P H
Sbjct: 40 QTWSDPAVTQEYFDFLNNVNQRELMTDCTSTIVGSGRIGNFLREHGT--GQDLVIRRGQKIPEDAPG---------PVYLCTRNDDLEEIIENCPESKKDDLVFIQNGMLERMLRRHDMS--ENTRANLYFAISKMDADPIDG-----ITETNPE----GLTAVCGKWEGAFQERILKAGLTCKILKERDFRRSQLEKLIWISVFNLIGAVH---GNIPMGEVAQMHEREVTELSIELAHMIRFTLTVGMLPDIEKRM--LAYG----RRVKEFPTALKEFEWRNGFFYKYSMLARKNGFPDPTPMH 315
BLAST of EWM26454.1 vs. NCBI_GenBank
Match: gi|612396467|ref|XP_007513753.1| (predicted protein [Bathycoccus prasinos] >gi|412991433|emb|CCO16278.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 134.035 bits (336), Expect = 2.239e-32 Identity = 93/286 (32.52%), Postives = 141/286 (49.30%), Query Frame = 0
Query: 105 SVIIGKGKLGQALVQWGGMGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFG-LPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTC-REYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVR 388
++IIG G++GQAL G E D+++ RDD P+ + S+G PI+VC +E+VI P +R DL+FMQ+ L++ L+ GL +K TQ L YF+++ FG P +G V+ + E G T V G W VA R DL V D +R MLE+L++ S F L+ H + T G++A H E++ ++ EL + +A+I V R+ A D PT +E+ +RNG +LS + P P H L +
Sbjct: 63 AIIIGGGRVGQALFDMGV--EGDVIVKRDDEFPS--SPSSG------PIFVCTRNDVLETVIEKTPANRREDLIFMQNGYLDSFLQSKGL--EKNTQALIYFAVAKFGEKPTDG-----VTSVNPE----GLTAVTGKWSDQVAARFHNGDLSCHVKDAAKYRASMLEKLIWISAFMLVGAQHPGA---TVGDVATTHKSEVEGLIKELVQGVADINDVTFEAGTLERLLAYA------DSVAHFPTAVKEFEWRNGFFYNLSTQTMQQSKDDPFPKHTAMLKAIN 318 The following BLAST results are available for this feature:
BLAST of EWM26454.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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