EWM30258.1, cds421 (CDS) Nannochloropsis gaditana

Overview
NameEWM30258.1
Unique Namecds421
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1047408..1047494 -
Alignment locationCM002455.1:1046557..1047134 -
Alignment locationCM002455.1:1045792..1046452 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30258.1
Product26s protease regulatory subunit 6a-a
Orig transcript idgnl|cribi|Naga_100003g61.1775.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1047408..1047494 -
CM002455.1supercontigCM002455.1:1046557..1047134 -
CM002455.1supercontigCM002455.1:1045792..1046452 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0019538protein metabolic process
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR003960ATPase_AAA_CS
IPR00593726S_Psome_P45
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|585112917|gb|EWM30258.1| (26s protease regulatory subunit 6a-a [Nannochloropsis gaditana])

HSP 1 Score: 892.108 bits (2304), Expect = 0.000e+0
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0
Query:    1 MDVTSNEAIAAADAAATAAEEALDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
            MDVTSNEAIAAADAAATAAEEALDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA
Sbjct:    1 MDVTSNEAIAAADAAATAAEEALDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441          
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|669162854|ref|XP_008616989.1| (26S protease regulatory subunit 6A like A [Saprolegnia diclina VS20] >gi|530731443|gb|EQC29685.1| 26S protease regulatory subunit 6A like A [Saprolegnia diclina VS20])

HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 336/419 (80.19%), Postives = 375/419 (89.50%), Query Frame = 0
Query:   23 LDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
            ++ EI+ M+++E++QRIRLLDNEIRIM+SDIT I+ +S  QR+RIKEN +K+KLNKQLPYLVGNVVE+L+ME E++E+ DGAA D D+ RKG SAVIKTSTRQTIFL IPGLVD ++L P DLVGTNKDSYLILEKLPAEYDSRVKAMEVD KP+E++ DIGG DKQIQEL+EAVVLPMT K+ F  IG+ PPKGVLL+GPPGTGKT+LARACA +T A+FLKLA PQLVQMFIGDGAK+VRDAFELAKEKC +  +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFT N  IKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARI++IHSRKMNVD +DVNFDELARC DDFNGAQLKAVCVEAGMLALRREA  IKHEDFME I VV AKKK +L  YA
Sbjct:   20 IEPEILGMTNDELKQRIRLLDNEIRIMRSDITRINHESSSQRERIKENNEKVKLNKQLPYLVGNVVEILEMENEDDEQ-DGAATDTDAARKGKSAVIKTSTRQTIFLSIPGLVDTEKLVPNDLVGTNKDSYLILEKLPAEYDSRVKAMEVDEKPTEDYSDIGGLDKQIQELVEAVVLPMTHKERFEAIGITPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDKDKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTSNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARILQIHSRKMNVDTDDVNFDELARCTDDFNGAQLKAVCVEAGMLALRREATIIKHEDFMEGIGVVSAKKKATLQYYA 437          
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|673020760|ref|XP_008864341.1| (26S protease regulatory subunit 6A [Aphanomyces invadans] >gi|574479272|gb|ETW06266.1| 26S protease regulatory subunit 6A [Aphanomyces invadans])

HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 338/419 (80.67%), Postives = 375/419 (89.50%), Query Frame = 0
Query:   23 LDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
            ++ +I+ M+++E++QRIRLLDNEIRIM+SDIT I+ +S+ QR+RIKEN +K+KLNKQLPYLVGNVVE+L ME E++E+ DGAAAD D  RKG SAVIKTSTRQTIFL IPGLVD + L P DLVGTNKDSYLILEKLPAEYDSRVKAMEVD KP+E++ DIGG DKQIQEL+EAVVLPMT  + FL IG++PPKGVLLYGPPGTGKT+LARACA +T A+FLKLA PQLVQMFIGDGAK+VRDAFELAKEKC +  +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFT N  IKVIAATNRPDVLDPALLRSGRLDRKIELPHP+EEARARIM+IHSRKMNVD EDVNFDELARC DDFNGAQLKAVCVEAGMLALRREA  IKHEDFME I VV AKKK +L  YA
Sbjct:   19 IEPDILGMTNDELKQRIRLLDNEIRIMRSDITRINHESQTQRERIKENNEKVKLNKQLPYLVGNVVEILAMENEDDEQ-DGAAADADVGRKGKSAVIKTSTRQTIFLSIPGLVDAESLIPNDLVGTNKDSYLILEKLPAEYDSRVKAMEVDEKPTEDYSDIGGLDKQIQELVEAVVLPMTHMERFLAIGIQPPKGVLLYGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDKNKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTSNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARARIMQIHSRKMNVDMEDVNFDELARCTDDFNGAQLKAVCVEAGMLALRREATIIKHEDFMEGIGVVSAKKKATLQYYA 436          
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|813198372|ref|XP_012208769.1| (26S protease regulatory subunit 6A A [Saprolegnia parasitica CBS 223.65] >gi|641526114|gb|KDO20506.1| 26S protease regulatory subunit 6A A [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0
Identity = 334/419 (79.71%), Postives = 375/419 (89.50%), Query Frame = 0
Query:   23 LDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
            ++ EI+ M+++E++QR+RLLDNEIRIM+SDIT I+ +S  QR+RIKEN +K+KLNKQLPYLVGNVVE+L+ME E++E+ DGAA D D+ RKG SAVIKTSTRQTIFL IPGLVD ++L P DLVGTNK+SYLILEKLPAEYDSRVKAMEVD KP+E++ DIGG DKQIQEL+EAVVLPMT K+ F  IG+ PPKGVLL+GPPGTGKT+LARACA +T A+FLKLA PQLVQMFIGDGAK+VRDAFELAKEKC +  +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFT N  IKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARI++IHSRKMNVD +DVNFDELARC DDFNGAQLKAVCVEAGMLALRREA  IKHEDFME I VV AKKK +L  YA
Sbjct:   20 IEPEILSMTNDELKQRVRLLDNEIRIMRSDITRINHESASQRERIKENNEKVKLNKQLPYLVGNVVEILEMENEDDEQ-DGAATDTDAARKGKSAVIKTSTRQTIFLSIPGLVDTEKLVPNDLVGTNKESYLILEKLPAEYDSRVKAMEVDEKPTEDYSDIGGLDKQIQELVEAVVLPMTHKERFDAIGITPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDKDKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTSNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARILQIHSRKMNVDTDDVNFDELARCTDDFNGAQLKAVCVEAGMLALRREATIIKHEDFMEGIGVVSAKKKATLQYYA 437          
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|698820709|ref|XP_009843383.1| (26S protease regulatory subunit 6A [Aphanomyces astaci] >gi|574101656|gb|ETV67218.1| 26S protease regulatory subunit 6A [Aphanomyces astaci])

HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0
Identity = 337/419 (80.43%), Postives = 375/419 (89.50%), Query Frame = 0
Query:   23 LDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
            ++ EI+ M+++E++QRIRLLDNEIRIM+SDIT I+ +S+ QR+RIKEN +K+KLNKQLPYLVGNVVE+L+ME E++E+ DGAAAD D  RKG SAVIKTSTRQTIFL IPGLVD ++L P DLVGTNKDSYLILEKLPAEYDSRVKAMEVD KP+E++ DIGG DKQIQEL+EAVVLPMT  + FL IG++PPKGVLLYGPPGTGKT+LARACA +T A+FLKLA PQLVQMFIGDGAK+VRDAFELAKEKC +  +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFT N  IKVIAATNRPDVLDPALLRSGRLDRKIELPHP EEARARI++IHSRKMNVD  DVNFDELARC DDFNGAQLKAVCVEAGMLALRREA  IKHEDFME I VV AKKK +L  YA
Sbjct:   19 IEPEILGMTNDELKQRIRLLDNEIRIMRSDITRINHESQTQRERIKENNEKVKLNKQLPYLVGNVVEILEMENEDDEQ-DGAAADADVGRKGKSAVIKTSTRQTIFLSIPGLVDAEKLIPNDLVGTNKDSYLILEKLPAEYDSRVKAMEVDEKPTEDYNDIGGLDKQIQELVEAVVLPMTHMERFLAIGIQPPKGVLLYGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDKSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTSNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPNEEARARILQIHSRKMNVDMADVNFDELARCTDDFNGAQLKAVCVEAGMLALRREASIIKHEDFMEGIGVVSAKKKATLQYYA 436          
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|676394703|ref|XP_009040629.1| (hypothetical protein AURANDRAFT_70378 [Aureococcus anophagefferens] >gi|323448821|gb|EGB04715.1| hypothetical protein AURANDRAFT_70378 [Aureococcus anophagefferens])

HSP 1 Score: 678.322 bits (1749), Expect = 0.000e+0
Identity = 330/420 (78.57%), Postives = 372/420 (88.57%), Query Frame = 0
Query:   23 LDAEIMQMSSEEIRQRIRLLDNEI-RIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
            LD EIM M+S+EIRQR RL++N++ RIMKS+I  I  +SE QR+RIKEN DKIKLNKQLPYLVGN++EVL++E  + EE DG A D+D  R G S VI+TSTRQTI+LP+PGLVD KEL PG+LVGTNKDSYLILEKLPAE+DSRVKAMEVD KP+EE+ DIGGCDKQI EL+EAVVLPMT  ++F  IG++PPKGVLL+GPPGTGKT+LARACA +T A+FLKLAGPQLVQMFIGDGAK+VRDAFELAKEK     + GAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELL+QLDGF+ ++ IKVIAATNRPDVLDPALLRSGRLDRKIELPHPTE ARARIM+IHSRKMNVDK+DVNF+ELARCCDDFNGAQ KAVCVEAGMLALRREA  +KHEDFME IS+V AKKKGSL  YA
Sbjct:    9 LDPEIMTMTSDEIRQRKRLIENDVVRIMKSEIQRIKHESEAQRERIKENQDKIKLNKQLPYLVGNIIEVLELESVDGEE-DGMAQDVDLNRSGKSVVIRTSTRQTIYLPVPGLVDTKELTPGELVGTNKDSYLILEKLPAEFDSRVKAMEVDEKPTEEYSDIGGCDKQINELIEAVVLPMTHAEMFSAIGIRPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKVNAGNKSGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLSQLDGFSSDDKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTETARARIMQIHSRKMNVDKDDVNFEELARCCDDFNGAQCKAVCVEAGMLALRREAAFVKHEDFMEGISIVAAKKKGSLEYYA 427          
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|301121358|ref|XP_002908406.1| (26S protease regulatory subunit 6A-A [Phytophthora infestans T30-4] >gi|262103437|gb|EEY61489.1| 26S protease regulatory subunit 6A-A [Phytophthora infestans T30-4])

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 337/424 (79.48%), Postives = 375/424 (88.44%), Query Frame = 0
Query:   18 AAEEALDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
             A+E LD EI+ MS+EE+RQRIRLLDN+IRIM+SDI  I+ +S  QR+RIKEN +K+KLNKQLPYLV NVVE+L++E++E+E++ GAA D+D+ RKG SAVIKTSTRQTIFLPIPGLVD   L P DLVG NKDSYLILEKLP+EYDSRVKAMEVD KP+EE+ DIGG DKQIQEL+EAVVLPMT K+ F  IG+ PPKGVLL+GPPGTGKT+LARACA +T A+FLKLA PQLVQMFIGDGAK+VRDAFELAKEKC +  +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFT N  IKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARI++IHSRKMNVD ED NFDELAR  DDFNGAQLKAVCVEAGMLALRRE+  IKHEDFME ISVV AKKK +L  YA
Sbjct:   11 GADEGLDPEILLMSNEELRQRIRLLDNDIRIMRSDIQRINHESNSQRERIKENNEKVKLNKQLPYLVANVVEILELEDDEDEQD-GAATDVDAARKGKSAVIKTSTRQTIFLPIPGLVDSTTLIPNDLVGVNKDSYLILEKLPSEYDSRVKAMEVDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFEAIGISPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDQNRGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTSNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARILQIHSRKMNVDTEDTNFDELARSTDDFNGAQLKAVCVEAGMLALRRESNVIKHEDFMEGISVVAAKKKATLQYYA 433          
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|695405258|ref|XP_009523754.1| (hypothetical protein PHYSODRAFT_557274, partial [Phytophthora sojae] >gi|348681221|gb|EGZ21037.1| hypothetical protein PHYSODRAFT_557274, partial [Phytophthora sojae])

HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0
Identity = 340/424 (80.19%), Postives = 374/424 (88.21%), Query Frame = 0
Query:   18 AAEEALDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
             AEE LD E++ MS+EE+RQRIRLLDN IRIM+SDI  I+ +S  QR+RIKEN +K+KLNKQLPYLV NVVEVL   E++E+E+DGAA D+D+QRKG SAVIKTSTRQTIFLPIPGLVD   L P DLVG NKDSYLILEKLP+EYDSRVKAMEVD KP+EE+ DIGG DKQIQEL+EAVVLPMT K+ F  IG+ PPKGVLL+GPPGTGKT+LARACA +T A+FLKLA PQLVQMFIGDGAK+VRDAFELAKEKC ++ +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFT N  IKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARI++IHSRKMNVD ED NFDELAR  DDFNGAQLKAVCVEAGMLALRRE+  IKHEDFME ISVV AKKK +L  YA
Sbjct:   11 GAEEELDPEVLLMSNEELRQRIRLLDNNIRIMRSDIQRINHESNSQRERIKENNEKVKLNKQLPYLVANVVEVL-ELEDDEDEQDGAATDVDAQRKGKSAVIKTSTRQTIFLPIPGLVDSTTLIPNDLVGVNKDSYLILEKLPSEYDSRVKAMEVDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFEAIGILPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDENRGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTNNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARILQIHSRKMNVDTEDTNFDELARSTDDFNGAQLKAVCVEAGMLALRRESNVIKHEDFMEGISVVAAKKKATLQYYA 433          
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|1173929717|gb|OQR82899.1| (26S protease regulatory subunit 6A-A [Achlya hypogyna])

HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0
Identity = 333/419 (79.47%), Postives = 374/419 (89.26%), Query Frame = 0
Query:   23 LDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
            ++ EI+ M+++E++QRIRLLDNE+RIM+SDIT I+ +S+ QR+RIKEN +K+KLNKQLPYLVGNVVE+L+ME E++E++  AA D D+ RKG SAVIKTSTRQTIFL IPGLVD ++L P DLVGTNKDSYLILEKLPAEYDSRVKAMEVD KP+E++ DIGG DKQIQEL+EAVVLPMT K+ F  IG+ PPKGVLL+GPPGTGKT+LARACA +T A+FLKLA PQLVQMFIGDGAK+VRDAFELAKEKC +  +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFT N  IKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARI++IHSRKMNVD  DVNFDELARC DDFNGAQLKAVCVEAGMLALRREA  IKHEDFME I VV AKKK +L  YA
Sbjct:   18 IEPEILSMTNDELKQRIRLLDNEVRIMRSDITRINHESQSQRERIKENNEKVKLNKQLPYLVGNVVEILEMEAEDDEQDG-AATDADAARKGKSAVIKTSTRQTIFLAIPGLVDTEKLVPNDLVGTNKDSYLILEKLPAEYDSRVKAMEVDEKPTEDYSDIGGLDKQIQELVEAVVLPMTHKERFEAIGITPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDKDKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTSNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARILQIHSRKMNVDTADVNFDELARCTDDFNGAQLKAVCVEAGMLALRREATIIKHEDFMEGIGVVSAKKKATLQYYA 435          
BLAST of EWM30258.1 vs. NCBI_GenBank
Match: gi|1214690845|gb|OWZ05945.1| (26S protease regulatory protein [Phytophthora megakarya])

HSP 1 Score: 674.47 bits (1739), Expect = 0.000e+0
Identity = 340/424 (80.19%), Postives = 375/424 (88.44%), Query Frame = 0
Query:   18 AAEEALDAEIMQMSSEEIRQRIRLLDNEIRIMKSDITSIDADSEGQRKRIKENLDKIKLNKQLPYLVGNVVEVLDMEEEEEEEEDGAAADIDSQRKGVSAVIKTSTRQTIFLPIPGLVDVKELKPGDLVGTNKDSYLILEKLPAEYDSRVKAMEVDTKPSEEWGDIGGCDKQIQELMEAVVLPMTRKDLFLKIGVKPPKGVLLYGPPGTGKTMLARACANKTKAVFLKLAGPQLVQMFIGDGAKMVRDAFELAKEKCAEDGQGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTVNENIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARIMEIHSRKMNVDKEDVNFDELARCCDDFNGAQLKAVCVEAGMLALRREAVEIKHEDFMEAISVVQAKKKGSLAMYA 441
             A+E LD EI+ MS+EE+RQRIRLLDN+IRIM+SDI  I+ +S  QR+RIKEN +K+KLNKQLPYLV NVVEVL   E++E+E+DGAA D+D+QRKG SAVIKTSTRQTIFLPIPGLVD   L P DLVG NKDSYLILEKLP+EYDSRVKAMEVD KP+EE+ DIGG DKQIQEL+EAVVLPMT K+ F  IG+ PPKGVLL+GPPGTGKT+LARACA +T A+FLKLA PQLVQMFIGDGAK+VRDAFELAKEKC ++ +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFT N  IKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARI++IHSRKMNVD ED NFDELAR  DDFNGAQLKAVCVEAGMLALRRE+  IKHEDFME ISVV AKKK +L  YA
Sbjct:   11 GADEGLDPEILLMSNEELRQRIRLLDNDIRIMRSDIQRINHESNSQRERIKENNEKVKLNKQLPYLVANVVEVL-ELEDDEDEQDGAATDVDAQRKGKSAVIKTSTRQTIFLPIPGLVDSTTLIPNDLVGVNKDSYLILEKLPSEYDSRVKAMEVDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFEAIGILPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDENRGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTNNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARILQIHSRKMNVDTEDTNFDELARSTDDFNGAQLKAVCVEAGMLALRRESNVIKHEDFMEGISVVAAKKKATLQYYA 433          
The following BLAST results are available for this feature:
BLAST of EWM30258.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112917|gb|EWM30258.1|0.000e+0100.0026s protease regulatory subunit 6a-a [Nannochlorop... [more]
gi|669162854|ref|XP_008616989.1|0.000e+080.1926S protease regulatory subunit 6A like A [Saprole... [more]
gi|673020760|ref|XP_008864341.1|0.000e+080.6726S protease regulatory subunit 6A [Aphanomyces in... [more]
gi|813198372|ref|XP_012208769.1|0.000e+079.7126S protease regulatory subunit 6A A [Saprolegnia ... [more]
gi|698820709|ref|XP_009843383.1|0.000e+080.4326S protease regulatory subunit 6A [Aphanomyces as... [more]
gi|676394703|ref|XP_009040629.1|0.000e+078.57hypothetical protein AURANDRAFT_70378 [Aureococcus... [more]
gi|301121358|ref|XP_002908406.1|0.000e+079.4826S protease regulatory subunit 6A-A [Phytophthora... [more]
gi|695405258|ref|XP_009523754.1|0.000e+080.19hypothetical protein PHYSODRAFT_557274, partial [P... [more]
gi|1173929717|gb|OQR82899.1|0.000e+079.4726S protease regulatory subunit 6A-A [Achlya hypog... [more]
gi|1214690845|gb|OWZ05945.1|0.000e+080.1926S protease regulatory protein [Phytophthora mega... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna421rna421Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications