EWM26483.1, cds4199 (CDS) Nannochloropsis gaditana

Overview
NameEWM26483.1
Unique Namecds4199
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1141749..1141829 +
Alignment locationCM002462.1:1142032..1144185 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26483.1
ProductRNA-processing protein, HAT helix
Orig transcript idgnl|cribi|Naga_100045g10.1675.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1141749..1141829 +
CM002462.1supercontigCM002462.1:1142032..1144185 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013949U3_snoRNA_assoc-6
IPR003107HAT
Homology
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|585108536|gb|EWM26483.1| (RNA-processing protein, HAT helix [Nannochloropsis gaditana])

HSP 1 Score: 1475.69 bits (3819), Expect = 0.000e+0
Identity = 744/744 (100.00%), Postives = 744/744 (100.00%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESVQLPLVEGEEGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFLKALEEAETLEGGVAGAESGQTWGPLVEEVLQGVEEAFGAADAAWARARHVLAGVGGLREVDEMTRKRRKDAGKEGARSSALGGSARKRGRRSSLSLPSGGESEAAEAWKESLRDGPRRCLQALETGVGRVAGIKEGKEAEKMWHYYLRGLCEFLHAPVSVLRVAFPQAQAALSANQGTSLLAPAMYLRWAALWVPATVLSSQTEGEGQGEGYKEEGERTDVGEARRILARGVEGHQDNARLWEARLRAEAWGQGGRVEEVFGMAQQALGPTAGIDSREEEEVGGGERRRCAVAGCWYVYLEWLMQQGVTEREKEGEGGDTDSSSDEEDEDEEEGGAAMEANSRKVENALEQALISTRGLGRVAICELWHRYTGLTGLQRALSAMGEGGIEEQEAMAALCQRAMRGDCSGLTVAWFEAALAFCGRVRAQQAAALWDEYEAFERAQGRHRAANNVRWRRAKAMGEE 744
            MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESVQLPLVEGEEGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFLKALEEAETLEGGVAGAESGQTWGPLVEEVLQGVEEAFGAADAAWARARHVLAGVGGLREVDEMTRKRRKDAGKEGARSSALGGSARKRGRRSSLSLPSGGESEAAEAWKESLRDGPRRCLQALETGVGRVAGIKEGKEAEKMWHYYLRGLCEFLHAPVSVLRVAFPQAQAALSANQGTSLLAPAMYLRWAALWVPATVLSSQTEGEGQGEGYKEEGERTDVGEARRILARGVEGHQDNARLWEARLRAEAWGQGGRVEEVFGMAQQALGPTAGIDSREEEEVGGGERRRCAVAGCWYVYLEWLMQQGVTEREKEGEGGDTDSSSDEEDEDEEEGGAAMEANSRKVENALEQALISTRGLGRVAICELWHRYTGLTGLQRALSAMGEGGIEEQEAMAALCQRAMRGDCSGLTVAWFEAALAFCGRVRAQQAAALWDEYEAFERAQGRHRAANNVRWRRAKAMGEE
Sbjct:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESVQLPLVEGEEGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFLKALEEAETLEGGVAGAESGQTWGPLVEEVLQGVEEAFGAADAAWARARHVLAGVGGLREVDEMTRKRRKDAGKEGARSSALGGSARKRGRRSSLSLPSGGESEAAEAWKESLRDGPRRCLQALETGVGRVAGIKEGKEAEKMWHYYLRGLCEFLHAPVSVLRVAFPQAQAALSANQGTSLLAPAMYLRWAALWVPATVLSSQTEGEGQGEGYKEEGERTDVGEARRILARGVEGHQDNARLWEARLRAEAWGQGGRVEEVFGMAQQALGPTAGIDSREEEEVGGGERRRCAVAGCWYVYLEWLMQQGVTEREKEGEGGDTDSSSDEEDEDEEEGGAAMEANSRKVENALEQALISTRGLGRVAICELWHRYTGLTGLQRALSAMGEGGIEEQEAMAALCQRAMRGDCSGLTVAWFEAALAFCGRVRAQQAAALWDEYEAFERAQGRHRAANNVRWRRAKAMGEE 744          
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|698781613|ref|XP_009823850.1| (hypothetical protein H257_02061 [Aphanomyces astaci] >gi|574121574|gb|ETV87051.1| hypothetical protein H257_02061 [Aphanomyces astaci])

HSP 1 Score: 247.284 bits (630), Expect = 1.322e-68
Identity = 126/280 (45.00%), Postives = 184/280 (65.71%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESVQLPLVEGEEGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFL 280
            MADAV   +++M+P LEDLQ   +FT +EVR I  KRRDFE+ ++R   RK D LRYI +ELNL+ LR  RK + GL K SLSDH+G   +H IF+RAL K RGD++LWLQ++ +C++TGS K  S+    ALQL PR   +WI AA++EF    +  +ARVL+QR +R+N   S  LW +YF+LE LYV KL+ RR  LGL+ E+ + K      + S+ +  V+GE+  ++   + E      ++S + +L GA+P++V+  AI+A P++   RL+F+
Sbjct:    1 MADAVQYVMEKMIPELEDLQHLQIFTKDEVRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYELNLDALRRQRKKRMGLTKLSLSDHSGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSSKLLSKLFTNALQLHPRNEAIWIEAAAWEFATNLNVDSARVLLQRSIRINPH-SQKLWLEYFRLEFLYVQKLRTRREVLGLDTEKTKPK------ELSLDIAPVDGEDAPIDATTDSESST---EKSRQEILQGAIPKIVFRNAIQAIPQNAAFRLAFI 270          
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|673023092|ref|XP_008865507.1| (hypothetical protein H310_03430 [Aphanomyces invadans] >gi|574478735|gb|ETW05730.1| hypothetical protein H310_03430 [Aphanomyces invadans])

HSP 1 Score: 239.195 bits (609), Expect = 1.317e-65
Identity = 138/326 (42.33%), Postives = 189/326 (57.98%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESVQLPLVEGE-EGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFLKALEEAETLEGGVAGAESGQTWGPLVEEVLQGVEEAFGAADAAWA 325
            MADAV   +++M+P LEDLQ   +FT EEVR I  KRRDFE+ ++R   RK D LRYI +ELNL+ LR  RK + GL K S SDH G   +H IF+RAL K RGD++LWLQ++ +C++TGS K  S+    ALQL PR   LWI AAS+EF    +  +ARVLMQR +R+N   S  LW +YF+LE LYV KL+ RR  LGL+ +  +        + S+ +  V+GE    V+ + E   +E   D+S   +L GA+P++VY  A  A P D   RL F+            +  A  G    P+ + +L+     F    A W+
Sbjct:    1 MADAVQYVMEKMIPELEDLQQLQIFTKEEVRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYELNLDALRRQRKKRLGLQKQSSSDHTGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSSKLLSKLFTNALQLHPRNETLWIEAASWEFSTNLNVDSARVLMQRSIRMN-PHSKKLWLEYFRLEFLYVQKLRTRREVLGLDADTTKPL------ELSLDIAPVKGEGAAQVDAIAE-SAKESAVDKSRHEILQGAIPKIVYRNASHAIPNDAAFRLQFVSI--------SNLFPATYG---SPVAKVILESSLADFPTDAAVWS 307          
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|669152718|ref|XP_008611921.1| (hypothetical protein SDRG_07843 [Saprolegnia diclina VS20] >gi|530736273|gb|EQC34515.1| hypothetical protein SDRG_07843 [Saprolegnia diclina VS20])

HSP 1 Score: 236.884 bits (603), Expect = 6.982e-65
Identity = 125/280 (44.64%), Postives = 175/280 (62.50%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESVQLPLVEGEEGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFL 280
            MAD V   +++M+P LEDLQ   +F+ +E+R I  KRRDFE+ ++R+  RK D LRYI +ELNL+ LR  RK + GL KT++SDHA    +H IFERA+ K +GD++LWLQ++ YC++  S K  S+    ALQL PR   +WI AAS+EF    +  +ARVLMQR +R+N   S  LW +YF+LE LYV KL+ RR  LGL+    + K E   E E++       EE  +    EV P     + S +A+L  A+P++V+  AI+A P D   RL F+
Sbjct:    1 MADQVNYNMEKMIPELEDLQQLQIFSKDEIRQIVQKRRDFEYTMKRQPLRKVDCLRYIEYELNLDALRRQRKKRMGLKKTTISDHAPVARVHNIFERAINKHKGDIDLWLQHIAYCKNNASRKMMSKLFTSALQLHPRNEAIWIEAASWEFNTNLNMDSARVLMQRSIRINPH-SQRLWAEYFRLEFLYVQKLRARRELLGLDAPVEKPK-ELSLEIETL------DEEANLANNDEV-PAVSAMEESRQAILNAAIPKIVFQNAIQAIPNDASFRLKFV 271          
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|1173933917|gb|OQR85453.1| (U3 small nucleolar RNA-associated protein 6 [Achlya hypogyna])

HSP 1 Score: 234.958 bits (598), Expect = 3.011e-64
Identity = 129/280 (46.07%), Postives = 176/280 (62.86%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESVQLPLVEGEEGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFL 280
            MAD V   +++M+P LE+LQ   +FT +E+R I  KRRDFE+ ++R+  RK D LRYI +E+NL+ LR  RK + GL KT+LSDHA    IH IFERAL K +GD++LWLQ++ YC+STGS K        ALQ+ PR   +WI AAS+EF    +  +ARVLMQR +R+N   S  LW +YF+LE LYV KL+ RR  LG++    E   E   E E    PL E  E         EP+  L+++S + +L GA+P++V+  A++A P D   RL FL
Sbjct:    1 MADQVNYKMEKMIPELEELQALQIFTKDEIRQIVQKRRDFEYTMKRQPLRKVDCLRYIEYEINLDALRRQRKKRMGLKKTTLSDHAPVTRIHNIFERALMKHKGDMDLWLQHIAYCKSTGSRKLI------ALQMHPRNEAIWIEAASWEFTASLNMDSARVLMQRSIRIN-PHSQRLWIEYFRLEFLYVQKLRARREVLGIDAPA-EAPKELSLEIE----PLAEEAEAP-------EPQLSLQEQSRQEILNGAIPKIVFANAVQAIPGDAAFRLQFL 261          
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|813112814|ref|XP_012195293.1| (hypothetical protein SPRG_19098 [Saprolegnia parasitica CBS 223.65] >gi|641540496|gb|KDO34278.1| hypothetical protein SPRG_19098 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 233.417 bits (594), Expect = 1.420e-63
Identity = 124/282 (43.97%), Postives = 175/282 (62.06%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESV--QLPLVEGEEGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFL 280
            MAD V   +++M+P LEDLQ   +F+ +E+R I  KRRDFE+ ++R+  RK D LRYI +ELNL+ LR  RK + GL KT++SDHA    +H IFERA+ K +GD++LWLQ++ YC++  S K  S+    ALQL PR   +WI AAS+EF    +  +ARVLMQR +R+N   S  LW +YF+LE LYV KL+ RR  LGL+    + K E   + E++  +  L   E   +  M+E          S +A+L  A+P++VY  AI+A P D   RL F+
Sbjct:    1 MADQVNYNMEKMIPELEDLQQLQIFSKDEIRQIVQKRRDFEYTMKRQPLRKVDCLRYIEYELNLDALRRQRKKRMGLKKTTISDHAPVARVHNIFERAVNKHKGDIDLWLQHIAYCKNNASRKMMSKLFTSALQLHPRNEAIWIEAASWEFNTNLNMDSARVLMQRSIRINPH-SQRLWAEYFRLEFLYVQKLRARRELLGLDAPVEKPK-ELSLDIETLDEEANLATDEAPALSAMEE----------SRQAILNAAIPKIVYQNAIQAIPSDASFRLQFV 270          
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|595495567|gb|EXX77453.1| (Utp6p [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 227.254 bits (578), Expect = 2.862e-62
Identity = 157/571 (27.50%), Postives = 275/571 (48.16%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLV-KTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEE-----KESVQLPLVEGEEGGVEG----MKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFLKALEEAETLEGGVAGAESGQTWGPLVEEVLQGVEEAFGAADAAWARARHVLAGVGGLREVDEMTRKRRKDAGKEGARSSALGGSARKRGRRSSLSLPSGGESEAAEAWKESLRDGPRRCLQALETGVGRVAGIKEGKEAEKMWHYYLRGLCEFLHAPVSVLRVAFPQAQAALSANQG--TSLLAPAMYLRWAALWVPATVLSSQTEGEGQGEGYKEEGERTDVGEARRILARGVEGHQDNARLWEARLRA-----EAWGQGGRVEEVFGMAQQALGPTAGI 554
            MA+ V   L++M+P LEDL+ + +FT EE+++I  KR +FE+ L+RR A+  DFL+YI +E+NL+ L+  RK++ G+  + ++SD++ +  I+ IF+RA+ KF GD++LW+QY++Y ++ G HK  S+     LQL P     WI A+ YE+    +  +ARV +QRGLRLN  DS  LW QYFKLE++YV K+K RR  LG+  ++ E   E  +E     K+S     +  ++  ++     +K ++   +L D ++  +L G + +VVY  AI+A P DL  R  F+   +E          +++      + E +L+  E    A   ++   RHV A +  ++ V                                          E   A K S+ D  ++C++ L                ++MW+ + + L ++         +AF   +   +      ++L +  MYL W   W+                  KEE    D  + + +L +  +   ++++LWE R+       +  G+   ++E++ +A + L PT+ I
Sbjct:    1 MAETVQYYLEQMVPELEDLERKEIFTKEEIKSIVKKRTNFEYALKRRPAQIIDFLKYIEYEMNLDLLKKKRKNRLGIKGRVTISDYSIKRRIYHIFDRAIIKFAGDVKLWVQYIEYAKNEGDHKMLSKIFGSVLQLHPTNPMFWIMASKYEYEINTNIMSARVFLQRGLRLN-HDSHQLWHQYFKLELIYVEKIKARRKILGISNKDDESNDESNDESNVERKDSQNFIEITADDDFLKTKKLELKGLDNLPNLDDDNL--LLRGELAKVVYSNAIKAIPNDLSFRKEFIDVCQEL---------SDTNTIQEEIYESILKDFENNPEA--LSYVAERHV-ANISDVQSV------------------------------------------EFVHAIKNSI-DEFQKCIETLPN--------------DEMWYLFSKFLLKYSRMVSEPNLIAFLNKKLLKTYKTASESNLASSQMYLDWIN-WILE----------------KEESNSNDTIKMKGLLTKATDTWPNSSKLWEKRINITISLNDNEGENDSIDELYKLALK-LNPTSLI 481          
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|1173955622|gb|OQS02563.1| (delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like [Thraustotheca clavata])

HSP 1 Score: 236.113 bits (601), Expect = 6.180e-62
Identity = 125/280 (44.64%), Postives = 177/280 (63.21%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESVQLPLVEGEEGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFL 280
            MAD V   +++M+P LEDLQ   +FT +E+R I  KRRDFE+ ++R+  RK D LRYI +ELNL+ LR  RK + GL KT+LSDHA    +H IFERAL K +GD++LWLQ++ +C++ GS K  S+    ALQ+ PR   +WI AAS+EF    +  +ARVLMQR +R+N   S  LWT+YF+LE LYV KL+ RR  LGL+    + K    E    ++    E  E   + + E+E       +S + +L GA+P+++Y  AI+A P D+  RL F+
Sbjct:  525 MADQVNYIMEKMIPELEDLQELQIFTKDEIRQIVQKRRDFEYTMKRQPLRKVDCLRYIEYELNLDALRRQRKKRMGLKKTTLSDHAPITRVHNIFERALMKHKGDIDLWLQHIAFCKNNGSRKLMSKLFTSALQMHPRNEAIWIEAASWEFTSNLNIDSARVLMQRSIRINPH-SQRLWTEYFRLEFLYVQKLRVRREVLGLDAPAEKPK----ELSLDIEPLAEEPAEEPADKLSEME-------QSRQEILNGAIPKIIYQNAIKAIPSDVQFRLKFV 792          
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|953495395|emb|CEG43302.1| (u3 small nucleolar rna-associated protein 6 [Plasmopara halstedii])

HSP 1 Score: 229.18 bits (583), Expect = 9.371e-62
Identity = 125/281 (44.48%), Postives = 171/281 (60.85%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEEKESVQLPLVEGEEGGVEGMKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFLK 281
            MAD V   +++M+P LEDL+ R +FT  E+R I  KRR FE+ L+R   RK D +RYI +EL L+ LR +RK +  LVK +L D AG   +H IF+R L K RG +ELWLQY+ +C+  GS +  S   ++ALQ  PR A LWI AASYEF    +  +ARVLMQR +RLN  +   LW +YF+LE+LYV KL  RR  L L+ +  +   E+G      QLP  E ++  VE   E   E   +  + + +L GA+ ++VY  AI A P D+  RL F+K
Sbjct:    1 MADTVQITMEKMIPELEDLEARKIFTKHEIRQIVDKRRSFEYSLKRVPLRKIDAMRYIEYELQLDALRAMRKERLNLVKVTLGDTAGVKRVHNIFDRVLFKHRGSIELWLQYVAFCKREGSSRVLSAVFSRALQSNPRCAELWIEAASYEFGVNLNVDSARVLMQRAIRLNKENRK-LWIEYFRLELLYVQKLTMRRQVLRLDDKTEKSLDEDGSTVLIDQLP--EEQDDQVEKYSE---EMTTKMNARKLILQGAIAKIVYTNAISAIPNDVSFRLEFVK 275          
BLAST of EWM26483.1 vs. NCBI_GenBank
Match: gi|552913988|gb|ERZ99270.1| (hypothetical protein GLOINDRAFT_279799 [Rhizophagus irregularis DAOM 181602] >gi|595495566|gb|EXX77452.1| Utp6p [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 228.024 bits (580), Expect = 2.847e-61
Identity = 157/571 (27.50%), Postives = 275/571 (48.16%), Query Frame = 0
Query:    1 MADAVYQALDRMLPALEDLQIRGLFTPEEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLRKHKAGLV-KTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSRALAQALQLFPRTAGLWIRAASYEFFERASPPAARVLMQRGLRLNASDSALLWTQYFKLEVLYVMKLKGRRTALGLEGEEREGKGEEGEE-----KESVQLPLVEGEEGGVEG----MKEVEPEEDLRDRSVRAVLAGAVPRVVYLAAIEARPRDLDMRLSFLKALEEAETLEGGVAGAESGQTWGPLVEEVLQGVEEAFGAADAAWARARHVLAGVGGLREVDEMTRKRRKDAGKEGARSSALGGSARKRGRRSSLSLPSGGESEAAEAWKESLRDGPRRCLQALETGVGRVAGIKEGKEAEKMWHYYLRGLCEFLHAPVSVLRVAFPQAQAALSANQG--TSLLAPAMYLRWAALWVPATVLSSQTEGEGQGEGYKEEGERTDVGEARRILARGVEGHQDNARLWEARLRA-----EAWGQGGRVEEVFGMAQQALGPTAGI 554
            MA+ V   L++M+P LEDL+ + +FT EE+++I  KR +FE+ L+RR A+  DFL+YI +E+NL+ L+  RK++ G+  + ++SD++ +  I+ IF+RA+ KF GD++LW+QY++Y ++ G HK  S+     LQL P     WI A+ YE+    +  +ARV +QRGLRLN  DS  LW QYFKLE++YV K+K RR  LG+  ++ E   E  +E     K+S     +  ++  ++     +K ++   +L D ++  +L G + +VVY  AI+A P DL  R  F+   +E          +++      + E +L+  E    A   ++   RHV A +  ++ V                                          E   A K S+ D  ++C++ L                ++MW+ + + L ++         +AF   +   +      ++L +  MYL W   W+                  KEE    D  + + +L +  +   ++++LWE R+       +  G+   ++E++ +A + L PT+ I
Sbjct:    1 MAETVQYYLEQMVPELEDLERKEIFTKEEIKSIVKKRTNFEYALKRRPAQIIDFLKYIEYEMNLDLLKKKRKNRLGIKGRVTISDYSIKRRIYHIFDRAIIKFAGDVKLWVQYIEYAKNEGDHKMLSKIFGSVLQLHPTNPMFWIMASKYEYEINTNIMSARVFLQRGLRLN-HDSHQLWHQYFKLELIYVEKIKARRKILGISNKDDESNDESNDESNVERKDSQNFIEITADDDFLKTKKLELKGLDNLPNLDDDNL--LLRGELAKVVYSNAIKAIPNDLSFRKEFIDVCQEL---------SDTNTIQEEIYESILKDFENNPEA--LSYVAERHV-ANISDVQSV------------------------------------------EFVHAIKNSI-DEFQKCIETLPN--------------DEMWYLFSKFLLKYSRMVSEPNLIAFLNKKLLKTYKTASESNLASSQMYLDWIN-WILE----------------KEESNSNDTIKMKGLLTKATDTWPNSSKLWEKRINITISLNDNEGENDSIDELYKLALK-LNPTSLI 481          
The following BLAST results are available for this feature:
BLAST of EWM26483.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108536|gb|EWM26483.1|0.000e+0100.00RNA-processing protein, HAT helix [Nannochloropsis... [more]
gi|698781613|ref|XP_009823850.1|1.322e-6845.00hypothetical protein H257_02061 [Aphanomyces astac... [more]
gi|673023092|ref|XP_008865507.1|1.317e-6542.33hypothetical protein H310_03430 [Aphanomyces invad... [more]
gi|669152718|ref|XP_008611921.1|6.982e-6544.64hypothetical protein SDRG_07843 [Saprolegnia dicli... [more]
gi|1173933917|gb|OQR85453.1|3.011e-6446.07U3 small nucleolar RNA-associated protein 6 [Achly... [more]
gi|813112814|ref|XP_012195293.1|1.420e-6343.97hypothetical protein SPRG_19098 [Saprolegnia paras... [more]
gi|595495567|gb|EXX77453.1|2.862e-6227.50Utp6p [Rhizophagus irregularis DAOM 197198w][more]
gi|1173955622|gb|OQS02563.1|6.180e-6244.64delta-1-pyrroline-5-carboxylate dehydrogenase 12A1... [more]
gi|953495395|emb|CEG43302.1|9.371e-6244.48u3 small nucleolar rna-associated protein 6 [Plasm... [more]
gi|552913988|gb|ERZ99270.1|2.847e-6127.50hypothetical protein GLOINDRAFT_279799 [Rhizophagu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4209rna4209Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications