EWM26471.1, cds4189 (CDS) Nannochloropsis gaditana

Overview
NameEWM26471.1
Unique Namecds4189
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1100518..1100635 -
Alignment locationCM002462.1:1100351..1100471 -
Alignment locationCM002462.1:1100166..1100307 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26471.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100045g22.1663.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1100518..1100635 -
CM002462.1supercontigCM002462.1:1100351..1100471 -
CM002462.1supercontigCM002462.1:1100166..1100307 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26471.1 vs. NCBI_GenBank
Match: gi|585108524|gb|EWM26471.1| (hypothetical protein Naga_100045g22 [Nannochloropsis gaditana])

HSP 1 Score: 259.61 bits (662), Expect = 9.673e-88
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 
Query:    1 MVKTNNTKAPLEVARKNQNKLGCSDTCGPISGVWLTFHAISLNLLGAAHGPMLCPPHLLGVTLRLCVCQLPLILVDIESKGSVGLLRLTFVSRETPWLAVCAMTSMMYFWSNSIYSGKLEHNNTVI 126
            MVKTNNTKAPLEVARKNQNKLGCSDTCGPISGVWLTFHAISLNLLGAAHGPMLCPPHLLGVTLRLCVCQLPLILVDIESKGSVGLLRLTFVSRETPWLAVCAMTSMMYFWSNSIYSGKLEHNNTVI
Sbjct:    1 MVKTNNTKAPLEVARKNQNKLGCSDTCGPISGVWLTFHAISLNLLGAAHGPMLCPPHLLGVTLRLCVCQLPLILVDIESKGSVGLLRLTFVSRETPWLAVCAMTSMMYFWSNSIYSGKLEHNNTVI 126
The following BLAST results are available for this feature:
BLAST of EWM26471.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108524|gb|EWM26471.1|9.673e-88100.00hypothetical protein Naga_100045g22 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4199rna4199Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications