EWM26489.1, cds4183 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|585108542|gb|EWM26489.1| (ddi1p [Nannochloropsis gaditana]) HSP 1 Score: 760.37 bits (1962), Expect = 0.000e+0 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0
Query: 1 MVHESRSNSVARKRGLGMSPHRLTTSLIPLGVLPPALLLALLLSPTSTVDATLYWGRRGTGVHAPAPSTSIPPASPRSHPRGPTHHLASATAHFRLRPEEEDEAKEGKETTREEGEGGSDCTYASFRAQIRREVEEESRLEEERELARARTSYAFHLAEERRRTGAGSESKEKGRRAGGEMGGVRAWARKRSGPEGRRSSRKSVFMDRESRRALSYGRSGQAAAASVASEEGVLERQGRELPSFPPSSSAPSPLDRSPGTEMVEGRVTEEGREEGREEGREVGNEAPANTTTAGAGAGARQSVIHLQVHKELHHQQEMLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
MVHESRSNSVARKRGLGMSPHRLTTSLIPLGVLPPALLLALLLSPTSTVDATLYWGRRGTGVHAPAPSTSIPPASPRSHPRGPTHHLASATAHFRLRPEEEDEAKEGKETTREEGEGGSDCTYASFRAQIRREVEEESRLEEERELARARTSYAFHLAEERRRTGAGSESKEKGRRAGGEMGGVRAWARKRSGPEGRRSSRKSVFMDRESRRALSYGRSGQAAAASVASEEGVLERQGRELPSFPPSSSAPSPLDRSPGTEMVEGRVTEEGREEGREEGREVGNEAPANTTTAGAGAGARQSVIHLQVHKELHHQQEMLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR
Sbjct: 1 MVHESRSNSVARKRGLGMSPHRLTTSLIPLGVLPPALLLALLLSPTSTVDATLYWGRRGTGVHAPAPSTSIPPASPRSHPRGPTHHLASATAHFRLRPEEEDEAKEGKETTREEGEGGSDCTYASFRAQIRREVEEESRLEEERELARARTSYAFHLAEERRRTGAGSESKEKGRRAGGEMGGVRAWARKRSGPEGRRSSRKSVFMDRESRRALSYGRSGQAAAASVASEEGVLERQGRELPSFPPSSSAPSPLDRSPGTEMVEGRVTEEGREEGREEGREVGNEAPANTTTAGAGAGARQSVIHLQVHKELHHQQEMLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|299473240|emb|CBN77640.1| (Peptidase aspartic, catalytic; UBA-like [Ectocarpus siliculosus]) HSP 1 Score: 81.6481 bits (200), Expect = 2.881e-13 Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
ML+++C +N R LRA VDTGA TVMS A A CGL S ID S G GVGFA+ILG +H+A IR
Sbjct: 211 MLFLECEVNGRVLRAFVDTGAQVTVMSAACAERCGLASRIDKSYAGRAVGVGFARILGRIHDASIR 276
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|1134824361|gb|OMJ27990.1| (DNA damage-inducible protein 1 [Smittium culicis]) HSP 1 Score: 77.411 bits (189), Expect = 7.634e-12 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 0
Query: 318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
MLY+D +N+ ++A VD+GA T+MS A A CGL+ +DT G +GVGFAKILG VH A I+
Sbjct: 207 MLYIDSEVNNVHIKAFVDSGAQATIMSTACAERCGLMRLLDTRFSGFAQGVGFAKILGRVHNAMIK 272
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|67989936|ref|NP_001018195.1| (UBA domain protein Mud1 [Schizosaccharomyces pombe 972h-] >gi|1723440|sp|Q10256.1|MUD1_SCHPO RecName: Full=UBA domain-containing protein mud1; AltName: Full=DNA-damage-inducible protein DDI1 homolog; AltName: Full=UBA domain-containing protein 1 >gi|1204230|emb|CAA93579.1| UBA domain protein Mud1 [Schizosaccharomyces pombe]) HSP 1 Score: 75.485 bits (184), Expect = 1.479e-11 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 0
Query: 306 LQVHKELHHQQEMLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
++ H E+ Q ML+V+ IN +++A VD+GA T++S A +CGL +DT G KGVG AKILGCVH A ++
Sbjct: 98 IENHPEVFGQVYMLFVNVEINGHKVKAFVDSGAQATILSADCAEKCGLTRLLDTRFQGVAKGVGMAKILGCVHSAPLK 175
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|1134822053|gb|OMJ26428.1| (DNA damage-inducible protein 1 [Smittium culicis]) HSP 1 Score: 75.485 bits (184), Expect = 1.544e-11 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 0
Query: 318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
MLY+D +N+ ++A VD+GA T+MS A +CGL+ +DT G +GVGFAKILG +H A I+
Sbjct: 17 MLYIDSEVNNVHIKAFVDSGAQATIMSTVCAEKCGLMRLLDTRFSGFAQGVGFAKILGRIHNAMIK 82
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|399170380|emb|CCE28757.1| (related to SNARE binding protein [Claviceps purpurea 20.1]) HSP 1 Score: 73.559 bits (179), Expect = 1.107e-10 Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
+LY+D +N R++A VD+GA T+MS A A +CG++ IDT G +GVG AKILG VH A+I+
Sbjct: 195 LLYIDVEVNGHRVKALVDSGAQATIMSPAYAEDCGIMRLIDTRFAGVARGVGTAKILGRVHSAQIK 260
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|1179909281|emb|SLM33708.1| (Ubiquitin-related domain [Umbilicaria pustulata]) HSP 1 Score: 73.559 bits (179), Expect = 1.259e-10 Identity = 51/159 (32.08%), Postives = 77/159 (48.43%), Query Frame = 0
Query: 233 VLERQGRELPSFPPSSSAPSPLDRSPGTEMVEGRV-TEEGREEGREEGREVGNEAPANT-TTAGAGAGARQSVIHLQVHKELHHQQE------MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
VLE+ R++P + P R M E +E E ++ + NE P N A RQ + + + + E MLY+D +N +++A VD+GA TT+MS + A +CG++ ID G +GVG AKILG VH A+I+
Sbjct: 169 VLEQLRRQVPELADAVQDPQRFQR-----MWEDLARNQEEAERAKQREMALLNEDPFNVEAQAKIEEIIRQEAVMENLQHAVDYNPEAFGRVHMLYIDVEVNDNKVKAFVDSGAQTTIMSPSCAEQCGIMRLIDKRFSGIARGVGTAKILGRVHSAQIK 322
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|734661100|gb|KHN98152.1| (DNA damage-inducible protein 1 [Metarhizium album ARSEF 1941]) HSP 1 Score: 72.7886 bits (177), Expect = 1.680e-10 Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0
Query: 318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
+LY+D +N +++A VD+GA T+MS A A CG++ IDT G +GVG AKILG VH A+IR
Sbjct: 186 LLYIDVEVNGHKVKALVDSGAQATIMSPAYAEACGIMRLIDTRFAGVARGVGTAKILGRVHSAQIR 251
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|1025660264|gb|OAA47728.1| (DNA damage-inducible protein 1 [Metarhizium rileyi RCEF 4871]) HSP 1 Score: 72.4034 bits (176), Expect = 2.420e-10 Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0
Query: 318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
+LY+D +N +++A VD+GA T+MS A A CG++ IDT G +GVG AKILG VH A+IR
Sbjct: 186 LLYIDVEVNGHKVKALVDSGAQATIMSPAYAEACGIMRLIDTRFAGVARGVGTAKILGRVHSAQIR 251
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|831770818|ref|XP_012753115.1| (hypothetical protein SAMD00019534_072540 [Acytostelium subglobosum LB1] >gi|735853747|dbj|GAM24079.1| hypothetical protein SAMD00019534_072540 [Acytostelium subglobosum LB1]) HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-10 Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0
Query: 318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
MLY+DC+IN ++A VDTGA ++M+L A CGL ID G KGVG AKI+G VH AK+R
Sbjct: 210 MLYIDCSINEHPIKAFVDTGAQQSIMTLKCAERCGLSRLIDRRFHGIAKGVGTAKIVGRVHAAKLR 275 The following BLAST results are available for this feature:
BLAST of EWM26489.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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