EWM26489.1, cds4183 (CDS) Nannochloropsis gaditana

Overview
NameEWM26489.1
Unique Namecds4183
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1070894..1071876 -
Alignment locationCM002462.1:1070562..1070730 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26489.1
Productddi1p
Orig transcript idgnl|cribi|Naga_100045g28.1681.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1070894..1071876 -
CM002462.1supercontigCM002462.1:1070562..1070730 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005515protein binding
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom
IPR019103Peptidase_aspartic_DDI1-type
Homology
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|585108542|gb|EWM26489.1| (ddi1p [Nannochloropsis gaditana])

HSP 1 Score: 760.37 bits (1962), Expect = 0.000e+0
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0
Query:    1 MVHESRSNSVARKRGLGMSPHRLTTSLIPLGVLPPALLLALLLSPTSTVDATLYWGRRGTGVHAPAPSTSIPPASPRSHPRGPTHHLASATAHFRLRPEEEDEAKEGKETTREEGEGGSDCTYASFRAQIRREVEEESRLEEERELARARTSYAFHLAEERRRTGAGSESKEKGRRAGGEMGGVRAWARKRSGPEGRRSSRKSVFMDRESRRALSYGRSGQAAAASVASEEGVLERQGRELPSFPPSSSAPSPLDRSPGTEMVEGRVTEEGREEGREEGREVGNEAPANTTTAGAGAGARQSVIHLQVHKELHHQQEMLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            MVHESRSNSVARKRGLGMSPHRLTTSLIPLGVLPPALLLALLLSPTSTVDATLYWGRRGTGVHAPAPSTSIPPASPRSHPRGPTHHLASATAHFRLRPEEEDEAKEGKETTREEGEGGSDCTYASFRAQIRREVEEESRLEEERELARARTSYAFHLAEERRRTGAGSESKEKGRRAGGEMGGVRAWARKRSGPEGRRSSRKSVFMDRESRRALSYGRSGQAAAASVASEEGVLERQGRELPSFPPSSSAPSPLDRSPGTEMVEGRVTEEGREEGREEGREVGNEAPANTTTAGAGAGARQSVIHLQVHKELHHQQEMLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR
Sbjct:    1 MVHESRSNSVARKRGLGMSPHRLTTSLIPLGVLPPALLLALLLSPTSTVDATLYWGRRGTGVHAPAPSTSIPPASPRSHPRGPTHHLASATAHFRLRPEEEDEAKEGKETTREEGEGGSDCTYASFRAQIRREVEEESRLEEERELARARTSYAFHLAEERRRTGAGSESKEKGRRAGGEMGGVRAWARKRSGPEGRRSSRKSVFMDRESRRALSYGRSGQAAAASVASEEGVLERQGRELPSFPPSSSAPSPLDRSPGTEMVEGRVTEEGREEGREEGREVGNEAPANTTTAGAGAGARQSVIHLQVHKELHHQQEMLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383          
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|299473240|emb|CBN77640.1| (Peptidase aspartic, catalytic; UBA-like [Ectocarpus siliculosus])

HSP 1 Score: 81.6481 bits (200), Expect = 2.881e-13
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 0
Query:  318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            ML+++C +N R LRA VDTGA  TVMS A A  CGL S ID S  G   GVGFA+ILG +H+A IR
Sbjct:  211 MLFLECEVNGRVLRAFVDTGAQVTVMSAACAERCGLASRIDKSYAGRAVGVGFARILGRIHDASIR 276          
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|1134824361|gb|OMJ27990.1| (DNA damage-inducible protein 1 [Smittium culicis])

HSP 1 Score: 77.411 bits (189), Expect = 7.634e-12
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 0
Query:  318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            MLY+D  +N+  ++A VD+GA  T+MS A A  CGL+  +DT   G  +GVGFAKILG VH A I+
Sbjct:  207 MLYIDSEVNNVHIKAFVDSGAQATIMSTACAERCGLMRLLDTRFSGFAQGVGFAKILGRVHNAMIK 272          
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|67989936|ref|NP_001018195.1| (UBA domain protein Mud1 [Schizosaccharomyces pombe 972h-] >gi|1723440|sp|Q10256.1|MUD1_SCHPO RecName: Full=UBA domain-containing protein mud1; AltName: Full=DNA-damage-inducible protein DDI1 homolog; AltName: Full=UBA domain-containing protein 1 >gi|1204230|emb|CAA93579.1| UBA domain protein Mud1 [Schizosaccharomyces pombe])

HSP 1 Score: 75.485 bits (184), Expect = 1.479e-11
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 0
Query:  306 LQVHKELHHQQEMLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            ++ H E+  Q  ML+V+  IN  +++A VD+GA  T++S   A +CGL   +DT   G  KGVG AKILGCVH A ++
Sbjct:   98 IENHPEVFGQVYMLFVNVEINGHKVKAFVDSGAQATILSADCAEKCGLTRLLDTRFQGVAKGVGMAKILGCVHSAPLK 175          
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|1134822053|gb|OMJ26428.1| (DNA damage-inducible protein 1 [Smittium culicis])

HSP 1 Score: 75.485 bits (184), Expect = 1.544e-11
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 0
Query:  318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            MLY+D  +N+  ++A VD+GA  T+MS   A +CGL+  +DT   G  +GVGFAKILG +H A I+
Sbjct:   17 MLYIDSEVNNVHIKAFVDSGAQATIMSTVCAEKCGLMRLLDTRFSGFAQGVGFAKILGRIHNAMIK 82          
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|399170380|emb|CCE28757.1| (related to SNARE binding protein [Claviceps purpurea 20.1])

HSP 1 Score: 73.559 bits (179), Expect = 1.107e-10
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 0
Query:  318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            +LY+D  +N  R++A VD+GA  T+MS A A +CG++  IDT   G  +GVG AKILG VH A+I+
Sbjct:  195 LLYIDVEVNGHRVKALVDSGAQATIMSPAYAEDCGIMRLIDTRFAGVARGVGTAKILGRVHSAQIK 260          
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|1179909281|emb|SLM33708.1| (Ubiquitin-related domain [Umbilicaria pustulata])

HSP 1 Score: 73.559 bits (179), Expect = 1.259e-10
Identity = 51/159 (32.08%), Postives = 77/159 (48.43%), Query Frame = 0
Query:  233 VLERQGRELPSFPPSSSAPSPLDRSPGTEMVEGRV-TEEGREEGREEGREVGNEAPANT-TTAGAGAGARQSVIHLQVHKELHHQQE------MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            VLE+  R++P    +   P    R     M E     +E  E  ++    + NE P N    A      RQ  +   +   + +  E      MLY+D  +N  +++A VD+GA TT+MS + A +CG++  ID    G  +GVG AKILG VH A+I+
Sbjct:  169 VLEQLRRQVPELADAVQDPQRFQR-----MWEDLARNQEEAERAKQREMALLNEDPFNVEAQAKIEEIIRQEAVMENLQHAVDYNPEAFGRVHMLYIDVEVNDNKVKAFVDSGAQTTIMSPSCAEQCGIMRLIDKRFSGIARGVGTAKILGRVHSAQIK 322          
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|734661100|gb|KHN98152.1| (DNA damage-inducible protein 1 [Metarhizium album ARSEF 1941])

HSP 1 Score: 72.7886 bits (177), Expect = 1.680e-10
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0
Query:  318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            +LY+D  +N  +++A VD+GA  T+MS A A  CG++  IDT   G  +GVG AKILG VH A+IR
Sbjct:  186 LLYIDVEVNGHKVKALVDSGAQATIMSPAYAEACGIMRLIDTRFAGVARGVGTAKILGRVHSAQIR 251          
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|1025660264|gb|OAA47728.1| (DNA damage-inducible protein 1 [Metarhizium rileyi RCEF 4871])

HSP 1 Score: 72.4034 bits (176), Expect = 2.420e-10
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0
Query:  318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            +LY+D  +N  +++A VD+GA  T+MS A A  CG++  IDT   G  +GVG AKILG VH A+IR
Sbjct:  186 LLYIDVEVNGHKVKALVDSGAQATIMSPAYAEACGIMRLIDTRFAGVARGVGTAKILGRVHSAQIR 251          
BLAST of EWM26489.1 vs. NCBI_GenBank
Match: gi|831770818|ref|XP_012753115.1| (hypothetical protein SAMD00019534_072540 [Acytostelium subglobosum LB1] >gi|735853747|dbj|GAM24079.1| hypothetical protein SAMD00019534_072540 [Acytostelium subglobosum LB1])

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-10
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0
Query:  318 MLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKIR 383
            MLY+DC+IN   ++A VDTGA  ++M+L  A  CGL   ID    G  KGVG AKI+G VH AK+R
Sbjct:  210 MLYIDCSINEHPIKAFVDTGAQQSIMTLKCAERCGLSRLIDRRFHGIAKGVGTAKIVGRVHAAKLR 275          
The following BLAST results are available for this feature:
BLAST of EWM26489.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108542|gb|EWM26489.1|0.000e+0100.00ddi1p [Nannochloropsis gaditana][more]
gi|299473240|emb|CBN77640.1|2.881e-1359.09Peptidase aspartic, catalytic; UBA-like [Ectocarpu... [more]
gi|1134824361|gb|OMJ27990.1|7.634e-1251.52DNA damage-inducible protein 1 [Smittium culicis][more]
gi|67989936|ref|NP_001018195.1|1.479e-1144.87UBA domain protein Mud1 [Schizosaccharomyces pombe... [more]
gi|1134822053|gb|OMJ26428.1|1.544e-1148.48DNA damage-inducible protein 1 [Smittium culicis][more]
gi|399170380|emb|CCE28757.1|1.107e-1050.00related to SNARE binding protein [Claviceps purpur... [more]
gi|1179909281|emb|SLM33708.1|1.259e-1032.08Ubiquitin-related domain [Umbilicaria pustulata][more]
gi|734661100|gb|KHN98152.1|1.680e-1050.00DNA damage-inducible protein 1 [Metarhizium album ... [more]
gi|1025660264|gb|OAA47728.1|2.420e-1050.00DNA damage-inducible protein 1 [Metarhizium rileyi... [more]
gi|831770818|ref|XP_012753115.1|2.680e-1053.03hypothetical protein SAMD00019534_072540 [Acytoste... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4193rna4193Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications