EWM26491.1, cds4182 (CDS) Nannochloropsis gaditana

Overview
NameEWM26491.1
Unique Namecds4182
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1070154..1070279 -
Alignment locationCM002462.1:1069715..1069978 -

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Properties
Property NameValue
Protein idEWM26491.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100646g4.4623.mrna
GbkeyCDS
End range.
End range1070279
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1070154..1070279 -
CM002462.1supercontigCM002462.1:1069715..1069978 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26491.1 vs. NCBI_GenBank
Match: gi|585108545|gb|EWM26491.1| (hypothetical protein Naga_100646g4, partial [Nannochloropsis gaditana])

HSP 1 Score: 255.373 bits (651), Expect = 5.581e-86
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 
Query:    1 SSSLGRFQIQTRISIIDSLSPPFVIGLDVLRHCRCDVSFQNQALILRSPGGAVEKSREETVPFSIGAAPSPVITKEGGGDGQGPTEGRGERPPREEEEEDPLGSLPPSRGGSRWRVCEGKPDDVVRNCT 129
            SSSLGRFQIQTRISIIDSLSPPFVIGLDVLRHCRCDVSFQNQALILRSPGGAVEKSREETVPFSIGAAPSPVITKEGGGDGQGPTEGRGERPPREEEEEDPLGSLPPSRGGSRWRVCEGKPDDVVRNCT
Sbjct:    1 SSSLGRFQIQTRISIIDSLSPPFVIGLDVLRHCRCDVSFQNQALILRSPGGAVEKSREETVPFSIGAAPSPVITKEGGGDGQGPTEGRGERPPREEEEEDPLGSLPPSRGGSRWRVCEGKPDDVVRNCT 129
The following BLAST results are available for this feature:
BLAST of EWM26491.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108545|gb|EWM26491.1|5.581e-86100.00hypothetical protein Naga_100646g4, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4192rna4192Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications