EWM26494.1, cds4180 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|585108548|gb|EWM26494.1| (n-6 adenine-specific dna methyltransferase 1 [Nannochloropsis gaditana]) HSP 1 Score: 350.132 bits (897), Expect = 4.705e-122 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 Query: 1 MLRSGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172 MLRSGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA Sbjct: 1 MLRSGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|553188189|ref|XP_005854751.1| (n -adenine-specific dna methyltransferase 1, partial [Nannochloropsis gaditana CCMP526] >gi|422294311|gb|EKU21611.1| n -adenine-specific dna methyltransferase 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 327.791 bits (839), Expect = 1.825e-112 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 Query: 4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEV 163 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEV Sbjct: 62 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEV 221
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|617627517|ref|XP_007528610.1| (PREDICTED: hemK methyltransferase family member 2 isoform X1 [Erinaceus europaeus]) HSP 1 Score: 159.844 bits (403), Expect = 2.455e-46 Identity = 87/166 (52.41%), Postives = 108/166 (65.06%), Query Frame = 0 Query: 4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRF 169 SGSG V+A LA +GP+ L++ TDIN A T TG N +L H ++ DL+ LLPRL VDLLVFNPPYV TP EV SHGIEA+WAGG++GREV+DR +P LL P+G YLV + EN PE+I M+ E LQ +V SR+A EVL VL+F Sbjct: 54 SGSGVVSAFLA----SVIGPQ--ALYMCTDINPEAAACTLETGRCNKVLIHPVI-TDLVKGLLPRLKEKVDLLVFNPPYVVTPPEEVRSHGIEAAWAGGRNGREVMDRFFPLVPILLSPEGS-FYLVTIKENNPEEILKTMKAEGLQGTIVLSRQAGREVLSVLKF 211
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|521023159|gb|EPQ04947.1| (HemK methyltransferase family member 2, partial [Myotis brandtii]) HSP 1 Score: 155.992 bits (393), Expect = 3.140e-45 Identity = 84/169 (49.70%), Postives = 107/169 (63.31%), Query Frame = 0 Query: 4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172 SGSG V+ LA +GP+ L++ TDIN +A T T N + H ++ DL+ LLPRL VDLLVFNPPYV TP EVGSHGIEA+WAGG++GREV+DR +P+LL P+ G YLV + EN PEDI M+ LQ + SR+A E+L VLRF + Sbjct: 9 SGSGVVSTFLA----SMIGPQ--ALYMCTDINPKAAACTLETARCNRVHVHPVI-TDLVKGLLPRLKEKVDLLVFNPPYVVTPPEEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPR-GLFYLVTIKENNPEDILETMKVRGLQGTIALSRRAGQEILSVLRFTKS 169
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|1123942877|ref|XP_019585433.1| (PREDICTED: hemK methyltransferase family member 2 isoform X1 [Rhinolophus sinicus]) HSP 1 Score: 156.377 bits (394), Expect = 5.584e-45 Identity = 86/169 (50.89%), Postives = 106/169 (62.72%), Query Frame = 0 Query: 4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172 SGSG V+A LA +GP+ L+I TDIN +A T T N + H E + DL+ LLPRL VDLLVFNPPYV TP EVGSHGIEA+WAGG+ GREV+DR +P+LL Q G YLV + EN PE+I M+ E L V SR+A E+L VL+F + Sbjct: 59 SGSGVVSAFLA----SMIGPQ--ALYICTDINPKAAACTLETARCNKV-HIEPIVTDLVKGLLPRLKEKVDLLVFNPPYVVTPPEEVGSHGIEAAWAGGRKGREVMDRFFPLVPDLLS-QRGVFYLVTIKENNPEEILKTMKMEGLHGTTVLSRQAGQEILSVLKFTKS 219
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|641735977|ref|XP_008158580.1| (PREDICTED: hemK methyltransferase family member 2 [Eptesicus fuscus]) HSP 1 Score: 155.606 bits (392), Expect = 1.415e-44 Identity = 86/169 (50.89%), Postives = 106/169 (62.72%), Query Frame = 0 Query: 4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172 SGSG V+A LA +GP L++ TDIN A T T N + H + + DL+ LLPRL VDLLVFNPPYV TP EVGSHGIEA+WAGG++GREV+DR +P+LL P+ G YLV + EN PEDI M+ + LQ SR+A EVL VLRF + Sbjct: 54 SGSGVVSAFLA----SMIGPR--ALYVCTDINPNAAACTLETARCNKV-HVQPVITDLVKGLLPRLKEKVDLLVFNPPYVVTPPEEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPR-GVFYLVTIKENNPEDILETMKVKGLQGTTALSRRAGQEVLSVLRFTKS 214
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|672826496|gb|KFH71386.1| (methylase [Mortierella verticillata NRRL 6337]) HSP 1 Score: 155.221 bits (391), Expect = 1.716e-44 Identity = 80/167 (47.90%), Postives = 109/167 (65.27%), Query Frame = 0 Query: 4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFI 170 SGSGCVTA + + L G +C L + TDINS+A RATQ T N L +I++ L +LPRL +DL+ FNPPYV TP+ EVGSH +EA+WAGG DGREV+D + I LL P+ G Y+V VNEN P+DI M+ + ++ +V++R A E L +L+F+ Sbjct: 52 SGSGCVTAFVGKIL----GESNC-LKLCTDINSKAARATQGTAKQNQ-LSVDIIETHLTNGILPRLSGKIDLVYFNPPYVLTPSEEVGSHSVEAAWAGGIDGREVIDEFMPYIKQLLSPK-GVFYMVVVNENKPDDIREIMKRDGFESSIVKTRLAGREKLFILKFV 211
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|1190403062|ref|XP_020851694.1| (hemK methyltransferase family member 2 isoform X1 [Phascolarctos cinereus]) HSP 1 Score: 155.221 bits (391), Expect = 1.878e-44 Identity = 82/166 (49.40%), Postives = 109/166 (65.66%), Query Frame = 0 Query: 4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRF 169 SGSG V+A LA + GP+ L++ TDIN +A T T N + H + + DL LLPRL VDLLVFNPPYV TP+ EVGSHGIEA+WAGG++GREV+DR + +LL P+ G YLV + EN P++I M++ LQ ++V SR+A E+L VL+F Sbjct: 59 SGSGIVSAFLASII----GPQ--ALYMCTDINPKAADCTLETALCNKV-HIQPIITDLAKGLLPRLFKKVDLLVFNPPYVVTPSEEVGSHGIEAAWAGGRNGREVMDRFFPLVADLLSPE-GFFYLVTIKENNPDEIMETMKKYGLQGKIVLSRQAGQEILSVLKF 216
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|7717305|emb|CAB90428.1| (PRED28 [Homo sapiens]) HSP 1 Score: 154.836 bits (390), Expect = 2.438e-44 Identity = 84/169 (49.70%), Postives = 106/169 (62.72%), Query Frame = 0 Query: 4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172 SGSG V+A LA +GP+ L++ TDIN A T T N + H + + DL+ LLPRL VDLLVFNPPYV TP EVGSHGIEA+WAGGK+GREV+DR +P+LL P+ G YLV + EN PE+I M+ + LQ SR+A E L VL+F + Sbjct: 54 SGSGVVSAFLA----SMIGPQ--ALYMCTDINPEAAACTLETARCNKV-HIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTPPQEVGSHGIEAAWAGGKNGREVMDRFFPLVPDLLSPK-GLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 214
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|313104228|sp|Q9Y5N5.3|HEMK2_HUMAN (RecName: Full=HemK methyltransferase family member 2; AltName: Full=M.HsaHemK2P; AltName: Full=N(6)-adenine-specific DNA methyltransferase 1) HSP 1 Score: 154.836 bits (390), Expect = 2.438e-44 Identity = 84/169 (49.70%), Postives = 106/169 (62.72%), Query Frame = 0 Query: 4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172 SGSG V+A LA +GP+ L++ TDIN A T T N + H + + DL+ LLPRL VDLLVFNPPYV TP EVGSHGIEA+WAGGK+GREV+DR +P+LL P+ G YLV + EN PE+I M+ + LQ SR+A E L VL+F + Sbjct: 54 SGSGVVSAFLA----SMIGPQ--ALYMCTDINPEAAACTLETARCNKV-HIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTPPQEVGSHGIEAAWAGGKNGREVMDRFFPLVPDLLSPK-GLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 214 The following BLAST results are available for this feature:
BLAST of EWM26494.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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