EWM26492.1, cds4179 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|585108546|gb|EWM26492.1| (cell cycle control protein [Nannochloropsis gaditana]) HSP 1 Score: 147.517 bits (371), Expect = 5.410e-45 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKASTSKPRGKRGSGPIGEVH 73
MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKASTSKPRGKRGSGPIGEVH
Sbjct: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKASTSKPRGKRGSGPIGEVH 73
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|1026965269|ref|XP_016610340.1| (hypothetical protein SPPG_02775 [Spizellomyces punctatus DAOM BR117] >gi|907096772|gb|KND02301.1| hypothetical protein SPPG_02775 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 73.1738 bits (178), Expect = 1.700e-13 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKASTS--KPR 61
M C +SGE EEPV S+ SG L+EKR+ILKYI +DP NGEEL DDL+P+ + KPR
Sbjct: 1 MFCALSGETPEEPVASKKSGHLFEKRLILKYIADNGRDPVNGEELGADDLLPLNLTNKVVKPR 63
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|1032647988|gb|OAQ29284.1| (WD40 repeat-like protein [Mortierella elongata AG-77]) HSP 1 Score: 72.4034 bits (176), Expect = 2.987e-13 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKAS--TSKPR 61
M C ISGE E PV+S+ SG +YE+R+I+KYIE KDP +GE+L DDL+ +K++ T KPR
Sbjct: 1 MFCAISGEAPEHPVVSKKSGQVYERRLIVKYIEDNGKDPVSGEDLSVDDLLDIKSTPGTVKPR 63
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|298715400|emb|CBJ28011.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.0182 bits (175), Expect = 4.466e-13 Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKASTS-KPR 61
M C ISG+ E PV+S+ SG +YEKR+I+KYI+AE K PA GEEL DDL+ V++ + KPR
Sbjct: 1 MQCAISGQTPETPVVSKKSGHVYEKRLIVKYIDAEGKCPATGEELTADDLLDVRSEGAVKPR 62
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|1183351851|gb|ORX79897.1| (WD40 repeat-like protein [Anaeromyces robustus]) HSP 1 Score: 72.0182 bits (175), Expect = 4.516e-13 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKASTSKPRGK 63
M C I+ E ++PV+S+ +G LYEKR+ILKY+E HK P GEE+ DDLI +K TS GK
Sbjct: 1 MFCSITKEPVQDPVISKKTGHLYEKRIILKYLEENHKCPITGEEMSEDDLIELKTGTSTLAGK 63
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|367026468|ref|XP_003662518.1| (hypothetical protein MYCTH_107891 [Thermothelomyces thermophila ATCC 42464] >gi|347009787|gb|AEO57273.1| hypothetical protein MYCTH_107891 [Thermothelomyces thermophila ATCC 42464]) HSP 1 Score: 71.633 bits (174), Expect = 6.420e-13 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKAS-TSKPR 61
M C +SGE+ EEPV+SR +G ++EKR+ILKYIE K+P EEL P+DL+ VK S +PR
Sbjct: 388 MLCALSGEVPEEPVVSRKTGTVFEKRLILKYIEENGKEPGTNEELDPEDLLDVKTSRVVRPR 449
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|672824023|gb|KFH68916.1| (hypothetical protein MVEG_05720 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 71.633 bits (174), Expect = 6.449e-13 Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKA--STSKPR 61
M C ISGE E PV+S+ SG +YE+R+I+KYIE KDP GE+L +DL+ +K+ ST KPR
Sbjct: 1 MFCAISGEAPEHPVVSKKSGQVYERRLIVKYIEDNGKDPVTGEDLSEEDLLDIKSSPSTVKPR 63
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|1003747914|gb|KXX83014.1| (Pre-mRNA-processing factor 19 [Madurella mycetomatis]) HSP 1 Score: 71.2478 bits (173), Expect = 7.141e-13 Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKAS-TSKPR 61
M C +SGE+ EEPV+SR +G ++EKR+ILKYIE K+P EEL +DL+P+K S +PR
Sbjct: 1 MFCALSGEVPEEPVVSRKTGTVFEKRLILKYIEENGKEPGTDEELDAEDLLPLKTSRVVRPR 62
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|1190918787|gb|OTB07905.1| (hypothetical protein M426DRAFT_317412 [Hypoxylon sp. CI-4A]) HSP 1 Score: 71.2478 bits (173), Expect = 8.514e-13 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKAS-TSKPR 61
M C ISGE +EPV+S+ SG ++EKR+I KYIE KDP +GE+L DDL+P+K+S +PR
Sbjct: 1 MLCSISGEAPQEPVVSKLSGAVFEKRLIEKYIEENGKDPVSGEDLSLDDLLPIKSSRVVRPR 62
BLAST of EWM26492.1 vs. NCBI_GenBank
Match: gi|1190932069|gb|OTB20784.1| (hypothetical protein K445DRAFT_313259 [Daldinia sp. EC12]) HSP 1 Score: 70.8626 bits (172), Expect = 1.222e-12 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0
Query: 1 MHCGISGEICEEPVLSRPSGVLYEKRVILKYIEAEHKDPANGEELCPDDLIPVKAS-TSKPR 61
M C +SGE +EPV+S+ SG ++EKR+I KYIE KDP +GE+L DDL+P+K+S +PR
Sbjct: 1 MLCSLSGEAPQEPVVSKLSGAVFEKRLIEKYIEENGKDPVSGEDLTVDDLLPIKSSRVVRPR 62 The following BLAST results are available for this feature:
BLAST of EWM26492.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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