EWM26502.1, cds4171 (CDS) Nannochloropsis gaditana

Overview
NameEWM26502.1
Unique Namecds4171
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1049216..1049306 +
Alignment locationCM002462.1:1049490..1049596 +
Alignment locationCM002462.1:1049749..1049841 +
Alignment locationCM002462.1:1050118..1050157 +

Link to JBrowse

Properties
Property NameValue
End range.
End range1050157
Protein idEWM26502.1
Productatp binding protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102155g1.3615.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1049216..1049306 +
CM002462.1supercontigCM002462.1:1049490..1049596 +
CM002462.1supercontigCM002462.1:1049749..1049841 +
CM002462.1supercontigCM002462.1:1050118..1050157 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
Homology
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|585108565|gb|EWM26502.1| (atp binding protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 228.409 bits (581), Expect = 6.566e-76
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDEEVLPA 110
            MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDEEVLPA
Sbjct:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDEEVLPA 110          
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1160568405|ref|XP_020428233.1| (protein kinase [Polysphondylium pallidum PN500] >gi|281201891|gb|EFA76099.1| protein kinase [Polysphondylium pallidum PN500])

HSP 1 Score: 98.5969 bits (244), Expect = 9.564e-22
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQA-EGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLE 103
            MT   G+  ++APE FRG++YTEK D YSYGI+LWEL T K P+  + P   AF  A E  RPPL +V   PP+   L+ + WH  P QR +F+++    D+++
Sbjct:  289 MTAAMGSLAWMAPESFRGEKYTEKVDVYSYGIILWELMTLKDPYCGMEPLKMAFLAAVEDYRPPLTQV---PPSWKSLILKCWHPKPDQRPTFQEILQMIDQID 389          
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1063519029|ref|XP_017981067.1| (PREDICTED: serine/threonine-protein kinase STY8 isoform X1 [Theobroma cacao])

HSP 1 Score: 95.1301 bits (235), Expect = 1.467e-20
Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
            MT  TG   ++APEV   Q Y +KAD +S+ ++LWEL T K P+AT+ P  AA    +GLRP L   EA  P +L+LM+R W A P +R SF ++ + ++ L +E
Sbjct:  440 MTAETGTYRWMAPEVINHQPYDQKADVFSFAVVLWELVTAKVPYATMTPLQAALGVRQGLRPDLP--EAAHPKLLDLMQRCWEAAPDKRPSFSEITAEFETLFEE 542          
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1063519032|ref|XP_017981068.1| (PREDICTED: serine/threonine-protein kinase STY8 isoform X2 [Theobroma cacao])

HSP 1 Score: 95.1301 bits (235), Expect = 1.513e-20
Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
            MT  TG   ++APEV   Q Y +KAD +S+ ++LWEL T K P+AT+ P  AA    +GLRP L   EA  P +L+LM+R W A P +R SF ++ + ++ L +E
Sbjct:  440 MTAETGTYRWMAPEVINHQPYDQKADVFSFAVVLWELVTAKVPYATMTPLQAALGVRQGLRPDLP--EAAHPKLLDLMQRCWEAAPDKRPSFSEITAEFETLFEE 542          
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1063519035|ref|XP_017981069.1| (PREDICTED: serine/threonine-protein kinase STY46 isoform X3 [Theobroma cacao])

HSP 1 Score: 94.7449 bits (234), Expect = 1.759e-20
Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
            MT  TG   ++APEV   Q Y +KAD +S+ ++LWEL T K P+AT+ P  AA    +GLRP L   EA  P +L+LM+R W A P +R SF ++ + ++ L +E
Sbjct:  430 MTAETGTYRWMAPEVINHQPYDQKADVFSFAVVLWELVTAKVPYATMTPLQAALGVRQGLRPDLP--EAAHPKLLDLMQRCWEAAPDKRPSFSEITAEFETLFEE 532          
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|678313416|emb|CDW87873.1| (UNKNOWN [Stylonychia lemnae])

HSP 1 Score: 93.5893 bits (231), Expect = 5.452e-20
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQA-EGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDM 95
            MT   G   ++APEV  G +YTEKAD +S+GI+LWEL TRK P+  ++ +  + +   EGLRP + E EA P   L+LM+R WH DP +R SF ++
Sbjct:  869 MTSKIGTYQWMAPEVINGYKYTEKADVFSFGIILWELATRKPPYYGIDGQEVSRKVVKEGLRPKITEKEA-PGVFLDLMKRCWHEDPERRPSFGEI 963          
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|403353167|gb|EJY76123.1| (Protein kinase putative (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 93.2041 bits (230), Expect = 6.821e-20
Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQA-EGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWD 100
            MT   G   ++APEV  G +YTEKAD +S+GI+LWEL TRK P+  ++ +  + +   EGLRP +++ EA P   L+LM+R WH DP +R SF ++    D
Sbjct:  878 MTSKIGTYQWMAPEVINGHKYTEKADVFSFGIILWELATRKPPYYGIDGQEVSRKVVKEGLRPKISDKEA-PGQFLDLMKRCWHEDPDKRPSFGEIIRELD 977          
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1137176129|gb|OMO53978.1| (hypothetical protein CCACVL1_28165 [Corchorus capsularis])

HSP 1 Score: 92.4337 bits (228), Expect = 1.077e-19
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
            MT  TG   ++APEV   Q Y +KAD +S+ I+LWEL T K P+ T+ P  AA    +GLRP L   E   P +++LM+R W ADP +R SF ++ +  + L +E
Sbjct:  438 MTAETGTYRWMAPEVINHQPYDQKADIFSFAIVLWELVTAKVPYDTMTPLQAALGVRQGLRPDLP--ENAHPKLIDLMKRCWEADPDRRPSFSEITAELETLYEE 540          
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|508724786|gb|EOY16683.1| (ACT-like protein tyrosine kinase family protein [Theobroma cacao])

HSP 1 Score: 92.0485 bits (227), Expect = 1.693e-19
Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
            MT  TG   ++APEV   Q Y +KAD +S+ ++LWEL T K P+ T+ P  AA    +GLRP L   EA  P +L++M+R W A P +R SF ++ + ++ L +E
Sbjct:  440 MTAETGTYRWMAPEVINHQPYDQKADVFSFAVVLWELVTAKVPYDTMTPLQAALGVRQGLRPDLP--EAAHPKLLDMMQRCWEAAPDKRPSFSEITAEFETLFEE 542          
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|645277275|ref|XP_008243692.1| (PREDICTED: serine/threonine-protein kinase STY8-like [Prunus mume])

HSP 1 Score: 92.0485 bits (227), Expect = 1.830e-19
Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
            MT  TG   ++APEV   Q Y +KAD +S+ I+LWEL T K P+ T+ P  AA    +GLRP L       P +LELM++ W ADP+ R SF D+ +  + L  E
Sbjct:  487 MTAETGTYRWMAPEVINHQPYDQKADVFSFAIVLWELVTAKVPYDTMTPLQAALGVRQGLRPDLPSTGH--PKLLELMQKCWDADPSNRPSFSDIIAELEYLLQE 589          
The following BLAST results are available for this feature:
BLAST of EWM26502.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108565|gb|EWM26502.1|6.566e-76100.00atp binding protein, partial [Nannochloropsis gadi... [more]
gi|1160568405|ref|XP_020428233.1|9.564e-2244.23protein kinase [Polysphondylium pallidum PN500] >g... [more]
gi|1063519029|ref|XP_017981067.1|1.467e-2043.81PREDICTED: serine/threonine-protein kinase STY8 is... [more]
gi|1063519032|ref|XP_017981068.1|1.513e-2043.81PREDICTED: serine/threonine-protein kinase STY8 is... [more]
gi|1063519035|ref|XP_017981069.1|1.759e-2043.81PREDICTED: serine/threonine-protein kinase STY46 i... [more]
gi|678313416|emb|CDW87873.1|5.452e-2046.88UNKNOWN [Stylonychia lemnae][more]
gi|403353167|gb|EJY76123.1|6.821e-2044.55Protein kinase putative (macronuclear) [Oxytricha ... [more]
gi|1137176129|gb|OMO53978.1|1.077e-1942.86hypothetical protein CCACVL1_28165 [Corchorus caps... [more]
gi|508724786|gb|EOY16683.1|1.693e-1941.90ACT-like protein tyrosine kinase family protein [T... [more]
gi|645277275|ref|XP_008243692.1|1.830e-1943.81PREDICTED: serine/threonine-protein kinase STY8-li... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4181rna4181Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications