EWM26502.1, cds4171 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|585108565|gb|EWM26502.1| (atp binding protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 228.409 bits (581), Expect = 6.566e-76 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDEEVLPA 110
MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDEEVLPA
Sbjct: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDEEVLPA 110
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1160568405|ref|XP_020428233.1| (protein kinase [Polysphondylium pallidum PN500] >gi|281201891|gb|EFA76099.1| protein kinase [Polysphondylium pallidum PN500]) HSP 1 Score: 98.5969 bits (244), Expect = 9.564e-22 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQA-EGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLE 103
MT G+ ++APE FRG++YTEK D YSYGI+LWEL T K P+ + P AF A E RPPL +V PP+ L+ + WH P QR +F+++ D+++
Sbjct: 289 MTAAMGSLAWMAPESFRGEKYTEKVDVYSYGIILWELMTLKDPYCGMEPLKMAFLAAVEDYRPPLTQV---PPSWKSLILKCWHPKPDQRPTFQEILQMIDQID 389
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1063519029|ref|XP_017981067.1| (PREDICTED: serine/threonine-protein kinase STY8 isoform X1 [Theobroma cacao]) HSP 1 Score: 95.1301 bits (235), Expect = 1.467e-20 Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
MT TG ++APEV Q Y +KAD +S+ ++LWEL T K P+AT+ P AA +GLRP L EA P +L+LM+R W A P +R SF ++ + ++ L +E
Sbjct: 440 MTAETGTYRWMAPEVINHQPYDQKADVFSFAVVLWELVTAKVPYATMTPLQAALGVRQGLRPDLP--EAAHPKLLDLMQRCWEAAPDKRPSFSEITAEFETLFEE 542
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1063519032|ref|XP_017981068.1| (PREDICTED: serine/threonine-protein kinase STY8 isoform X2 [Theobroma cacao]) HSP 1 Score: 95.1301 bits (235), Expect = 1.513e-20 Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
MT TG ++APEV Q Y +KAD +S+ ++LWEL T K P+AT+ P AA +GLRP L EA P +L+LM+R W A P +R SF ++ + ++ L +E
Sbjct: 440 MTAETGTYRWMAPEVINHQPYDQKADVFSFAVVLWELVTAKVPYATMTPLQAALGVRQGLRPDLP--EAAHPKLLDLMQRCWEAAPDKRPSFSEITAEFETLFEE 542
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1063519035|ref|XP_017981069.1| (PREDICTED: serine/threonine-protein kinase STY46 isoform X3 [Theobroma cacao]) HSP 1 Score: 94.7449 bits (234), Expect = 1.759e-20 Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
MT TG ++APEV Q Y +KAD +S+ ++LWEL T K P+AT+ P AA +GLRP L EA P +L+LM+R W A P +R SF ++ + ++ L +E
Sbjct: 430 MTAETGTYRWMAPEVINHQPYDQKADVFSFAVVLWELVTAKVPYATMTPLQAALGVRQGLRPDLP--EAAHPKLLDLMQRCWEAAPDKRPSFSEITAEFETLFEE 532
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|678313416|emb|CDW87873.1| (UNKNOWN [Stylonychia lemnae]) HSP 1 Score: 93.5893 bits (231), Expect = 5.452e-20 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQA-EGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDM 95
MT G ++APEV G +YTEKAD +S+GI+LWEL TRK P+ ++ + + + EGLRP + E EA P L+LM+R WH DP +R SF ++
Sbjct: 869 MTSKIGTYQWMAPEVINGYKYTEKADVFSFGIILWELATRKPPYYGIDGQEVSRKVVKEGLRPKITEKEA-PGVFLDLMKRCWHEDPERRPSFGEI 963
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|403353167|gb|EJY76123.1| (Protein kinase putative (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 93.2041 bits (230), Expect = 6.821e-20 Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQA-EGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWD 100
MT G ++APEV G +YTEKAD +S+GI+LWEL TRK P+ ++ + + + EGLRP +++ EA P L+LM+R WH DP +R SF ++ D
Sbjct: 878 MTSKIGTYQWMAPEVINGHKYTEKADVFSFGIILWELATRKPPYYGIDGQEVSRKVVKEGLRPKISDKEA-PGQFLDLMKRCWHEDPDKRPSFGEIIRELD 977
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|1137176129|gb|OMO53978.1| (hypothetical protein CCACVL1_28165 [Corchorus capsularis]) HSP 1 Score: 92.4337 bits (228), Expect = 1.077e-19 Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
MT TG ++APEV Q Y +KAD +S+ I+LWEL T K P+ T+ P AA +GLRP L E P +++LM+R W ADP +R SF ++ + + L +E
Sbjct: 438 MTAETGTYRWMAPEVINHQPYDQKADIFSFAIVLWELVTAKVPYDTMTPLQAALGVRQGLRPDLP--ENAHPKLIDLMKRCWEADPDRRPSFSEITAELETLYEE 540
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|508724786|gb|EOY16683.1| (ACT-like protein tyrosine kinase family protein [Theobroma cacao]) HSP 1 Score: 92.0485 bits (227), Expect = 1.693e-19 Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
MT TG ++APEV Q Y +KAD +S+ ++LWEL T K P+ T+ P AA +GLRP L EA P +L++M+R W A P +R SF ++ + ++ L +E
Sbjct: 440 MTAETGTYRWMAPEVINHQPYDQKADVFSFAVVLWELVTAKVPYDTMTPLQAALGVRQGLRPDLP--EAAHPKLLDMMQRCWEAAPDKRPSFSEITAEFETLFEE 542
BLAST of EWM26502.1 vs. NCBI_GenBank
Match: gi|645277275|ref|XP_008243692.1| (PREDICTED: serine/threonine-protein kinase STY8-like [Prunus mume]) HSP 1 Score: 92.0485 bits (227), Expect = 1.830e-19 Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = 0
Query: 1 MTQCTGNAYYLAPEVFRGQQYTEKADCYSYGILLWELFTRKYPFATLNPRSAAFQQAEGLRPPLAEVEAQPPAVLELMERAWHADPAQRMSFKDMASAWDRLEDE 105
MT TG ++APEV Q Y +KAD +S+ I+LWEL T K P+ T+ P AA +GLRP L P +LELM++ W ADP+ R SF D+ + + L E
Sbjct: 487 MTAETGTYRWMAPEVINHQPYDQKADVFSFAIVLWELVTAKVPYDTMTPLQAALGVRQGLRPDLPSTGH--PKLLELMQKCWDADPSNRPSFSDIIAELEYLLQE 589 The following BLAST results are available for this feature:
BLAST of EWM26502.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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