EWM26506.1, cds4166 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26506.1 vs. NCBI_GenBank
Match: gi|585108572|gb|EWM26506.1| (ascorbate peroxidase [Nannochloropsis gaditana]) HSP 1 Score: 343.199 bits (879), Expect = 2.199e-119 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MPLPSLRTDSGAPNKNNVGASGYAWNSMSGDGLLQTFTKAGFGAREAVLLYGAMGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALADPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND 170
MPLPSLRTDSGAPNKNNVGASGYAWNSMSGDGLLQTFTKAGFGAREAVLLYGAMGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALADPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND
Sbjct: 1 MPLPSLRTDSGAPNKNNVGASGYAWNSMSGDGLLQTFTKAGFGAREAVLLYGAMGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALADPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND 170
BLAST of EWM26506.1 vs. NCBI_GenBank
Match: gi|553183106|ref|XP_005853840.1| (ascorbate peroxidase [Nannochloropsis gaditana CCMP526] >gi|422295220|gb|EKU22519.1| ascorbate peroxidase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 235.728 bits (600), Expect = 1.094e-77 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
Query: 54 MGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALADPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND 170
MGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALADPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND
Sbjct: 1 MGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALADPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND 117
BLAST of EWM26506.1 vs. NCBI_GenBank
Match: gi|299116878|emb|CBN74988.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.5153 bits (236), Expect = 3.614e-20 Identity = 65/151 (43.05%), Postives = 89/151 (58.94%), Query Frame = 0
Query: 22 GYAWNSMSGDGLLQTFTKAGFGAREAVLLYGAMGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTV--GLGSVDKA-LADPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRN 169
GY+++ +G G+ F +AG G RE VLL GA+G+V A G G+ D D +D + IPNTFGK+SD G L N F +L ++A G+G V KA L D ++KT+V KYAGN+ AF+ DL+E Y K+T LG + RN
Sbjct: 229 GYSFDEPTGAGVKAAFKRAGLGPREMVLLLGALGSVSDAASAVGNGGGDGDDDDLEDLAWQNSIPNTFGKESDKLGRPLSN-SFGPGFLQRVAAAGKDGGGIGVVGKALLEDDEVKTYVRKYAGNSKAFMSDLSEAYTKMTLLGERYETRN 378
BLAST of EWM26506.1 vs. NCBI_GenBank
Match: gi|551657576|ref|XP_005831559.1| (hypothetical protein GUITHDRAFT_152902 [Guillardia theta CCMP2712] >gi|428175691|gb|EKX44579.1| hypothetical protein GUITHDRAFT_152902 [Guillardia theta CCMP2712]) HSP 1 Score: 63.5438 bits (153), Expect = 9.702e-9 Identity = 56/188 (29.79%), Postives = 93/188 (49.47%), Query Frame = 0
Query: 11 GAPNKNNVGASGYAWNSMSGDGLLQTFTKAGFGAREAVLLYGAMGAVYLATKDAGK-TAGEVDADIDD-------DGEIEAFIPNTFGKQ-SDIYGAQLG------NRKFDASYLAQIAKGQT--------VGLGSVDKALA-----DPQLKTFVGKY--AGNNNAFLKDLNECYLKLTTLGYQGTKR 168
G P+ + G S + +++ + +G+L +K+G A+EAVLL GA+G++ A+ + + A +V D++D +G + P T + S++YG G N FD++ +A +A G D LA D ++ +V +Y GNNN F+KD +CY+ LT LG T R
Sbjct: 208 GKPSSKS-GMSSWDFSAPTAEGILGAMSKSGLTAKEAVLLAGAIGSLNQASLNMKEAIANKVVCDVEDPSCTSEEEGYYGLYSPVTIRSETSNLYGKNRGASAVNSNTGFDSARIAGLAGDAKFSNKFLIDAASGKSDDPLAKALMSDKEMSKWVMEYGKKGNNNKFVKDCEKCYVALTELGRSNTSR 394 The following BLAST results are available for this feature:
BLAST of EWM26506.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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