EWM26511.1, cds4162 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|585108579|gb|EWM26511.1| (lysosomal alpha, partial [Nannochloropsis gaditana]) HSP 1 Score: 986.867 bits (2550), Expect = 0.000e+0 Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 0 Query: 1 LPPDPSKLESLGVADVPTLPGCPRPGGGVGAGARPCRRRRGQGGGSAARIGPAERRHPVDRRQRPGIPREKAEPSRHVERLARRAGRGKLLPSHHCRLPGGRRGRREGGREGRKGASSAIIGGFGPLRGTWLGEKGNGPCSLRQPCAGIEMGRQKVFMHKGLCDSQAGRVIRPPCLGWRSTRPANDSFRRGCRRPCPAIIIPLPSFPPSLPPSLPQGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSLAASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPEELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKTTEGAFMGGREGGHGGGQVVTLGPMEIRTFEVVLGMKVEGKKEVGGQGGGEGRKEGGRGRWRAGPAGLLATM 506 LPPDPSKLESLGVADVPTLPGCPRPGGGVGAGARPCRRRRGQGGGSAARIGPAERRHPVDRRQRPGIPREKAEPSRHVERLARRAGRGKLLPSHHCRLPGGRRGRREGGREGRKGASSAIIGGFGPLRGTWLGEKGNGPCSLRQPCAGIEMGRQKVFMHKGLCDSQAGRVIRPPCLGWRSTRPANDSFRRGCRRPCPAIIIPLPSFPPSLPPSLPQGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSLAASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPEELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKTTEGAFMGGREGGHGGGQVVTLGPMEIRTFEVVLGMKVEGKKEVGGQGGGEGRKEGGRGRWRAGPAGLLATM Sbjct: 1 LPPDPSKLESLGVADVPTLPGCPRPGGGVGAGARPCRRRRGQGGGSAARIGPAERRHPVDRRQRPGIPREKAEPSRHVERLARRAGRGKLLPSHHCRLPGGRRGRREGGREGRKGASSAIIGGFGPLRGTWLGEKGNGPCSLRQPCAGIEMGRQKVFMHKGLCDSQAGRVIRPPCLGWRSTRPANDSFRRGCRRPCPAIIIPLPSFPPSLPPSLPQGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSLAASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPEELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKTTEGAFMGGREGGHGGGQVVTLGPMEIRTFEVVLGMKVEGKKEVGGQGGGEGRKEGGRGRWRAGPAGLLATM 506
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|1195529613|ref|XP_021075993.1| (lysosomal alpha-mannosidase [Mus pahari]) HSP 1 Score: 114.39 bits (285), Expect = 4.045e-23 Identity = 90/251 (35.86%), Postives = 117/251 (46.61%), Query Frame = 0 Query: 216 QGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSLA-ASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPE-ELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKTTEGAFMGGREGGHGGGQVVTLGPMEIRTF 464 QG +SL G L+L++ RRLL DD RGV EPL ET G +VRG+H ++L + R + E P + SL +SP S +AP ++ S L ELPP + LLTL RW + LLRL HQFAV ED + LS PVT+++ +LF + ++ E TL+A QP S RL W T G + E VTL PMEIRTF Sbjct: 800 QGGSSLQDGSLELMVHRRLLVDDDRGVVEPLLET-------------NTGDKVRGRHLVLLSSVSDAAARHRLLAEQEVLAPQVVL-----------SLGGSSPYHSRAAPETQFSGLRQELPPQVHLLTL------ARWGPKM------------------LLLRLEHQFAVKEDSDRNLSSPVTLNVQNLFQTFTIIYLQETTLAANQPLSRASRLKWMTNTGP-ISNPEPSKLDPTSVTLKPMEIRTF 1001
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|676488269|ref|XP_009064562.1| (hypothetical protein LOTGIDRAFT_207233 [Lottia gigantea] >gi|556096109|gb|ESO84761.1| hypothetical protein LOTGIDRAFT_207233 [Lottia gigantea]) HSP 1 Score: 109.768 bits (273), Expect = 1.494e-21 Identity = 91/264 (34.47%), Postives = 122/264 (46.21%), Query Frame = 0 Query: 216 QGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSLAASPSPSPSAPPSRLSF--LPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPR----FLLRLAHQFAVDEDPEELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKTTEGAFMGGREG-------GHGGGQVVTLGPMEIRTFEV 466 QG +S+ GQL++++ RRLL DD GV EPLNET G D G+G+ VRG H + L +E R +E F L F+ A S + R + + LPP++ LLTL E+ G G P FLLRL H F VDED + LS+PV V L LF + + S+TELTL A P ++L+RL W + + E G VTL PM+IRTF++ Sbjct: 778 QGGSSIKDGQLEIMVHRRLLHDDALGVGEPLNET------GSD----GKGLVVRGSHFIFLDTI-KESAAVQRPFAEELFMAPQLSFTN-----------AQMKYSDWSKQYRTMWSGVKKTLPPNIHLLTL-------------------EQFAGT-GPVPSQDQPFLLRLEHMFEVDEDVD-LSKPVNVTLQDLFTTFEITSATELTLGANLPLNQLERLKWMSEDSKTTPINESRIKYEPLKLGDDLTVTLNPMQIRTFQI 998
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|1210524011|dbj|GAX17335.1| (lysosomal alpha-mannosidase [Fistulifera solaris]) HSP 1 Score: 109.383 bits (272), Expect = 1.966e-21 Identity = 92/277 (33.21%), Postives = 131/277 (47.29%), Query Frame = 0 Query: 198 AIIIPLPSFPPSLPPSLPQGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIE---HGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSLAASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPEELSQPVTVDLASLFPRYALLSST-ELTLSAGQPKSELQ--RLSWKTTEGAFMGGREGGHGGGQVVTLGPMEIRTFEVVL 468 AI + + S+ QG +SL G L+L++QRR L DD +GV EPLNET GG+ G+ R G+GV +RG H +M+G G G + R MD AF +FF P P+ S S L LP ++ L+T ++ ++LLRL HQ+ VD+D +EL++PV+VD+ LF + + E+TLS Q LQ +L W G+ + G +V L PMEIRTF V + Sbjct: 805 AIFLQDKNASLSVVVDRSQGGSSLQDGTLELMVQRRNLADDAKGVGEPLNETSGGMTPYPPYGNAERVGDGVIIRGTHRIMIG-KGLTGAKLARSLMDSAFAEPLIFFGK----------CTIPCPAIFQSASFSSGLSIGLPKNVMLITFARLN------------------------TAKYLLRLGHQYGVDDD-DELAEPVSVDIGLLFLGIGEVDTIDEMTLSGNQKWESLQKTKLPWSGETGS--TSDKDTSNKGNMVVLRPMEIRTFHVTV 1043
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|1023982119|gb|KZV21769.1| (alpha-mannosidase [Dorcoceras hygrometricum]) HSP 1 Score: 108.612 bits (270), Expect = 3.376e-21 Identity = 94/260 (36.15%), Postives = 128/260 (49.23%), Query Frame = 0 Query: 219 ASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSLAASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPEELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQ--RLSWKTTEGAFMG--GREGG--HGGGQVVTLGPMEIRTFEVVLGMKV 472 +S+A GQL+L+L RRLL+DD +GV+E LNETV ++ + G+ V+GK+ L G G + R E + P L FS Q D + P P+ +A S LP S+A+LTLQ + ED LLRLAH + V ED ++LS +VDL +FP + + E +LSA Q + E++ RLSWK G+ G GG H VV L PMEIRTF + KV Sbjct: 765 SSIADGQLELMLHRRLLYDDGKGVDEALNETVCILD-------KCVGLTVQGKYYLRFDPLGY-GSKWRRSFGQEIYSPFLLAFSEQND-----TFTNFPVPTFTAMDPSYS-----LPDSVAILTLQEL---------------------EDQIV---LLRLAHLYEVSED-KDLSVKASVDLKRVFPDKKIYNIRETSLSANQERGEMEKKRLSWKVEGGSNKQDPGPRGGPVHPTELVVELAPMEIRTFIIDFNSKV 981
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|1160140152|ref|XP_020371292.1| (lysosomal alpha-mannosidase [Rhincodon typus]) HSP 1 Score: 107.842 bits (268), Expect = 4.855e-21 Identity = 94/266 (35.34%), Postives = 124/266 (46.62%), Query Frame = 0 Query: 216 QGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAA-GREGMRELRVQMDEAFFPASLFFSTQADLLASPSLAASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPEELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKT-----TEGAFMGGREG-------GH--GGGQVVTLGPMEIRTFEV 466 QG +S G L+L++ RRLL DD RGV E L+E G D G G+ VRGKH + L G + L+ Q E P ++ + P A S P A S L ELPP+L LLTL +W +++ FL+RL HQF + E S+PVTVDLA+LF + + S E++L Q K ++ RLSWKT ++G + EG H VV L PMEIRTF V Sbjct: 767 QGGSSSNDGSLELMVHRRLLHDDNRGVGEALSEP------GYD----GTGLIVRGKHLVFLDTVRGSAELHRLQAQA-EYMAPWTI-------MGQGPGTAYSSRPKHVA---EFSALKEELPPNLHLLTL------AQWDSQS------------------FLIRLEHQFEMGE-SSIYSKPVTVDLANLFSAFKITSVEEMSLGFNQRKQDVSRLSWKTRPANISDGLLLSSSEGRRVKSVSSHKASSDYVVVLNPMEIRTFRV 986
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|113195690|ref|NP_034894.2| (lysosomal alpha-mannosidase precursor [Mus musculus] >gi|341941139|sp|O09159.4|MA2B1_MOUSE RecName: Full=Lysosomal alpha-mannosidase; Short=Laman; AltName: Full=Lysosomal acid alpha-mannosidase; AltName: Full=Mannosidase alpha class 2B member 1; AltName: Full=Mannosidase alpha-B; Flags: Precursor >gi|12836285|dbj|BAB23588.1| unnamed protein product [Mus musculus] >gi|74190911|dbj|BAE28235.1| unnamed protein product [Mus musculus]) HSP 1 Score: 107.842 bits (268), Expect = 5.427e-21 Identity = 88/251 (35.06%), Postives = 115/251 (45.82%), Query Frame = 0 Query: 216 QGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSL-AASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPE-ELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKTTEGAFMGGREGGHGGGQVVTLGPMEIRTF 464 QG +SL G L+L++ RRLL DD RGV+EPL ET G +VRG+H ++L + R + E P + SL +SP S + P ++ S L ELPP + LLTL RW + LLRL HQFA+ ED + LS PVT+++ +LF + + E TL+A QP S RL W T G E VTL PMEIRTF Sbjct: 800 QGGSSLQDGSLELMVHRRLLVDDDRGVSEPLLET-------------DTGDKVRGRHLVLLSSVSDAAARHRLLAEQEVLAPQVVL-----------SLGGSSPYHSRATPKTQFSGLRQELPPQVHLLTL------ARWGPKM------------------LLLRLEHQFALKEDSDRNLSSPVTLNVQNLFQTFTINYLQETTLAANQPLSRASRLKWMTNTGP-TSYPEPSKLDPTSVTLKPMEIRTF 1001
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|568956290|ref|XP_006530811.1| (PREDICTED: lysosomal alpha-mannosidase isoform X2 [Mus musculus] >gi|568956292|ref|XP_006530812.1| PREDICTED: lysosomal alpha-mannosidase isoform X2 [Mus musculus]) HSP 1 Score: 107.842 bits (268), Expect = 5.489e-21 Identity = 88/251 (35.06%), Postives = 115/251 (45.82%), Query Frame = 0 Query: 216 QGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSL-AASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPE-ELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKTTEGAFMGGREGGHGGGQVVTLGPMEIRTF 464 QG +SL G L+L++ RRLL DD RGV+EPL ET G +VRG+H ++L + R + E P + SL +SP S + P ++ S L ELPP + LLTL RW + LLRL HQFA+ ED + LS PVT+++ +LF + + E TL+A QP S RL W T G E VTL PMEIRTF Sbjct: 680 QGGSSLQDGSLELMVHRRLLVDDDRGVSEPLLET-------------DTGDKVRGRHLVLLSSVSDAAARHRLLAEQEVLAPQVVL-----------SLGGSSPYHSRATPKTQFSGLRQELPPQVHLLTL------ARWGPKM------------------LLLRLEHQFALKEDSDRNLSSPVTLNVQNLFQTFTINYLQETTLAANQPLSRASRLKWMTNTGP-TSYPEPSKLDPTSVTLKPMEIRTF 881
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|13529374|gb|AAH05430.1| (Mannosidase 2, alpha B1 [Mus musculus] >gi|148679053|gb|EDL11000.1| mannosidase 2, alpha B1 [Mus musculus]) HSP 1 Score: 107.842 bits (268), Expect = 5.884e-21 Identity = 88/251 (35.06%), Postives = 115/251 (45.82%), Query Frame = 0 Query: 216 QGVASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAAGREGMRELRVQMDEAFFPASLFFSTQADLLASPSL-AASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPE-ELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKTTEGAFMGGREGGHGGGQVVTLGPMEIRTF 464 QG +SL G L+L++ RRLL DD RGV+EPL ET G +VRG+H ++L + R + E P + SL +SP S + P ++ S L ELPP + LLTL RW + LLRL HQFA+ ED + LS PVT+++ +LF + + E TL+A QP S RL W T G E VTL PMEIRTF Sbjct: 800 QGGSSLQDGSLELMVHRRLLVDDDRGVSEPLLET-------------DTGDKVRGRHLVLLSSVSDAAARHRLLAEQEVLAPQVVL-----------SLGGSSPYHSRATPKTQFSGLRQELPPQVHLLTL------ARWGPKM------------------LLLRLEHQFALKEDSDRNLSSPVTLNVQNLFQTFTINYLQETTLAANQPLSRASRLKWMTNTGP-TSFPEPSKLDPTSVTLKPMEIRTF 1001
BLAST of EWM26511.1 vs. NCBI_GenBank
Match: gi|971512106|dbj|GAQ86088.1| (lysosomal alpha-mannosidase [Klebsormidium nitens]) HSP 1 Score: 107.842 bits (268), Expect = 5.887e-21 Identity = 98/259 (37.84%), Postives = 124/259 (47.88%), Query Frame = 0 Query: 219 ASLASGQLDLLLQRRLLFDDRRGVNEPLNETVGGIEHGGDWARRGEGVRVRGKHTLMLGAA-GREGMRELRVQMDEAFFPASLFFSTQADLLASPSLAASPSPSPSAPPSRLSFLPSELPPSLALLTLQYIHPRERWTTRTDSREGGEEGGGEDGCAPRFLLRLAHQFAVDEDPEELSQPVTVDLASLFPRYALLSSTELTLSAGQPKSELQRLSWKT--TEGAFMGGREGG--HGGGQVVTLGPMEIRTFEVVLGMKV 472 ASLA GQ+D++L RRLL DD RGV EPLNET GEG+ RG L +G E R LR + P L F+TQ +P+ S S S ++LPP++AL TLQ + DG LLRLAH + VDEDP ELSQ V+L +LFP + +TELTLS QPKS +++ W+ E GG V LGP+EIRTF ++ KV Sbjct: 834 ASLADGQVDVMLHRRLLHDDARGVGEPLNETA-----------YGEGLVTRG--VLKVGVHPTNESARWLRENALRVYSPLQLAFTTQKS-GGAPAWLRSHRGSFSGLRE-----GAQLPPNVALTTLQQL---------------------PDGTV---LLRLAHLYEVDEDP-ELSQLARVNLRALFPT-KIEKATELTLSGNQPKSAVKKKVWRVEGEESTRHASLRGGPFKDDDLTVELGPLEIRTFGILFAEKV 1047 The following BLAST results are available for this feature:
BLAST of EWM26511.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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